Protein–RNA interactions for Protein: Q7RTU7

SCX, Basic helix-loop-helix transcription factor scleraxis, humanhuman

Predictions only

Length 201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCXQ7RTU7 LINC01709-202ENST00000635702 1204 ntTSL 5 BASIC2.79□□□□□ -1.96
SCXQ7RTU7 MS4A14-203ENST00000395005 2813 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
SCXQ7RTU7 RNF38-210ENST00000611646 5185 ntTSL 5 BASIC2.79□□□□□ -1.96
SCXQ7RTU7 TM4SF18-201ENST00000296059 3852 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
SCXQ7RTU7 NDST3-201ENST00000296499 5961 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
SCXQ7RTU7 LCA5L-201ENST00000288350 2416 ntAPPRIS P1 TSL 5 BASIC2.79□□□□□ -1.96
SCXQ7RTU7 HMGB1-204ENST00000399489 1727 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
SCXQ7RTU7 DTNA-208ENST00000554864 1680 ntAPPRIS ALT2 TSL 1 (best) BASIC2.79□□□□□ -1.96
SCXQ7RTU7 NPFFR2-203ENST00000358749 1559 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
SCXQ7RTU7 AGTR1-202ENST00000402260 2172 ntTSL 5 BASIC2.78□□□□□ -1.96
SCXQ7RTU7 SCAF11-212ENST00000549162 3934 ntTSL 1 (best) BASIC2.78□□□□□ -1.96
SCXQ7RTU7 LINC01085-201ENST00000502759 1984 ntTSL 2 BASIC2.78□□□□□ -1.96
SCXQ7RTU7 MYCBP2-211ENST00000544440 14664 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
SCXQ7RTU7 KLRC1-201ENST00000347831 1332 ntAPPRIS ALT2 TSL 1 (best) BASIC2.78□□□□□ -1.96
SCXQ7RTU7 RNA5SP22-201ENST00000365393 109 ntBASIC2.78□□□□□ -1.96
SCXQ7RTU7 KLRC3-201ENST00000381903 798 ntAPPRIS P3 TSL 1 (best) BASIC2.78□□□□□ -1.96
SCXQ7RTU7 SNORA70E-201ENST00000384492 135 ntBASIC2.78□□□□□ -1.96
SCXQ7RTU7 ESCO2-202ENST00000397418 720 ntTSL 5 BASIC2.78□□□□□ -1.96
SCXQ7RTU7 RPS20P14-201ENST00000412545 360 ntBASIC2.78□□□□□ -1.96
SCXQ7RTU7 LINC01881-201ENST00000416103 412 ntBASIC2.78□□□□□ -1.96
SCXQ7RTU7 AC092647.1-201ENST00000420654 287 ntBASIC2.78□□□□□ -1.96
SCXQ7RTU7 AC007557.4-201ENST00000421907 430 ntTSL 1 (best) BASIC2.78□□□□□ -1.96
SCXQ7RTU7 AC015971.1-204ENST00000424788 1147 ntTSL 5 BASIC2.78□□□□□ -1.96
SCXQ7RTU7 LINC01492-202ENST00000425157 659 ntTSL 5 BASIC2.78□□□□□ -1.96
SCXQ7RTU7 RPL34P26-201ENST00000445636 354 ntBASIC2.78□□□□□ -1.96
SCXQ7RTU7 AC005772.1-201ENST00000446671 976 ntTSL 1 (best) BASIC2.78□□□□□ -1.96
SCXQ7RTU7 AL391427.1-201ENST00000451575 425 ntTSL 3 BASIC2.78□□□□□ -1.96
SCXQ7RTU7 AL355613.1-201ENST00000451856 480 ntTSL 2 BASIC2.78□□□□□ -1.96
SCXQ7RTU7 AC009158.1-205ENST00000452511 895 ntTSL 3 BASIC2.78□□□□□ -1.96
SCXQ7RTU7 LINC01014-203ENST00000455307 548 ntTSL 2 BASIC2.78□□□□□ -1.96
SCXQ7RTU7 CEACAMP4-201ENST00000457676 421 ntBASIC2.78□□□□□ -1.96
SCXQ7RTU7 RPS20P4-201ENST00000461659 355 ntBASIC2.78□□□□□ -1.96
SCXQ7RTU7 FPGT-203ENST00000467578 601 ntTSL 2 BASIC2.78□□□□□ -1.96
SCXQ7RTU7 AC007537.2-201ENST00000472093 511 ntBASIC2.78□□□□□ -1.96
SCXQ7RTU7 AC107398.1-201ENST00000486904 505 ntBASIC2.78□□□□□ -1.96
SCXQ7RTU7 RPL35P6-201ENST00000490024 372 ntBASIC2.78□□□□□ -1.96
SCXQ7RTU7 AC020651.1-201ENST00000490324 360 ntTSL 3 BASIC2.78□□□□□ -1.96
SCXQ7RTU7 TIFA-202ENST00000500655 769 ntAPPRIS P1 TSL 3 BASIC2.78□□□□□ -1.96
SCXQ7RTU7 HMGB1P3-201ENST00000502802 616 ntBASIC2.78□□□□□ -1.96
SCXQ7RTU7 AL159163.1-201ENST00000507747 600 ntAPPRIS P1 TSL 5 BASIC2.78□□□□□ -1.96
SCXQ7RTU7 AC098587.1-201ENST00000508241 540 ntTSL 4 BASIC2.78□□□□□ -1.96
SCXQ7RTU7 AC006499.6-201ENST00000511169 607 ntBASIC2.78□□□□□ -1.96
SCXQ7RTU7 PTGES3P3-201ENST00000511479 482 ntBASIC2.78□□□□□ -1.96
SCXQ7RTU7 AC093689.1-201ENST00000514737 246 ntTSL 5 BASIC2.78□□□□□ -1.96
SCXQ7RTU7 AC024958.1-203ENST00000520256 577 ntTSL 2 BASIC2.78□□□□□ -1.96
SCXQ7RTU7 IGLVVI-25-1-201ENST00000521893 249 ntBASIC2.78□□□□□ -1.96
SCXQ7RTU7 OSBPL9P2-201ENST00000526582 1228 ntBASIC2.78□□□□□ -1.96
SCXQ7RTU7 AP002812.4-201ENST00000532139 286 ntBASIC2.78□□□□□ -1.96
SCXQ7RTU7 MIR100HG-221ENST00000534297 572 ntTSL 4 BASIC2.78□□□□□ -1.96
SCXQ7RTU7 TRAV8-5-201ENST00000537369 341 ntBASIC2.78□□□□□ -1.96
SCXQ7RTU7 AC046130.2-201ENST00000537655 794 ntTSL 3 BASIC2.78□□□□□ -1.96
SCXQ7RTU7 PARPBP-212ENST00000543784 992 ntTSL 2 BASIC2.78□□□□□ -1.96
SCXQ7RTU7 AC025884.1-201ENST00000556034 378 ntBASIC2.78□□□□□ -1.96
SCXQ7RTU7 AL359237.1-202ENST00000556168 487 ntTSL 5 BASIC2.78□□□□□ -1.96
SCXQ7RTU7 AL121594.4-201ENST00000556211 1196 ntBASIC2.78□□□□□ -1.96
SCXQ7RTU7 AC022523.3-201ENST00000559643 410 ntTSL 3 BASIC2.78□□□□□ -1.96
SCXQ7RTU7 AC021549.1-201ENST00000580937 433 ntTSL 3 BASIC2.78□□□□□ -1.96
SCXQ7RTU7 AC005828.3-201ENST00000583552 591 ntTSL 5 BASIC2.78□□□□□ -1.96
SCXQ7RTU7 ZNF92P3-201ENST00000596594 954 ntBASIC2.78□□□□□ -1.96
SCXQ7RTU7 AC244505.7-201ENST00000599675 272 ntBASIC2.78□□□□□ -1.96
SCXQ7RTU7 AC079587.1-201ENST00000603846 277 ntBASIC2.78□□□□□ -1.96
SCXQ7RTU7 AL109618.2-201ENST00000605527 211 ntBASIC2.78□□□□□ -1.96
SCXQ7RTU7 AC073111.2-201ENST00000605657 1075 ntBASIC2.78□□□□□ -1.96
SCXQ7RTU7 AC009032.1-201ENST00000617574 431 ntBASIC2.78□□□□□ -1.96
SCXQ7RTU7 AC023490.1-202ENST00000620909 820 ntTSL 5 BASIC2.78□□□□□ -1.96
SCXQ7RTU7 LGI1-209ENST00000627699 664 ntTSL 3 BASIC2.78□□□□□ -1.96
SCXQ7RTU7 KCNJ16-209ENST00000589377 3684 ntAPPRIS P1 TSL 5 BASIC2.78□□□□□ -1.96
SCXQ7RTU7 AL158163.1-201ENST00000603915 1649 ntBASIC2.78□□□□□ -1.96
SCXQ7RTU7 VIP-202ENST00000367244 1584 ntAPPRIS P4 TSL 1 (best) BASIC2.78□□□□□ -1.96
SCXQ7RTU7 NXPH1-205ENST00000602349 1953 ntBASIC2.78□□□□□ -1.97
SCXQ7RTU7 QSER1-201ENST00000399302 9335 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.97
SCXQ7RTU7 CNOT10-206ENST00000454516 2760 ntTSL 2 BASIC2.78□□□□□ -1.97
SCXQ7RTU7 FAM35A-202ENST00000298786 3614 ntTSL 5 BASIC2.78□□□□□ -1.97
SCXQ7RTU7 WDR72-204ENST00000559418 3602 ntTSL 5 BASIC2.78□□□□□ -1.97
SCXQ7RTU7 CLCA2-201ENST00000370565 4025 ntAPPRIS P1 TSL 1 (best) BASIC2.77□□□□□ -1.97
SCXQ7RTU7 CFHR3-206ENST00000617219 1462 ntTSL 5 BASIC2.77□□□□□ -1.97
SCXQ7RTU7 OR5M3-202ENST00000641993 1400 ntAPPRIS P1 BASIC2.77□□□□□ -1.97
SCXQ7RTU7 IFI16-208ENST00000448393 2245 ntAPPRIS ALT2 TSL 5 BASIC2.77□□□□□ -1.97
SCXQ7RTU7 PTP4A1-205ENST00000626021 2203 ntAPPRIS P1 TSL 1 (best) BASIC2.77□□□□□ -1.97
SCXQ7RTU7 THEMIS-204ENST00000537166 3830 ntAPPRIS ALT2 TSL 2 BASIC2.77□□□□□ -1.97
SCXQ7RTU7 C6orf10-209ENST00000612031 2179 ntAPPRIS ALT2 TSL 5 BASIC2.77□□□□□ -1.97
SCXQ7RTU7 LARP1BP1-201ENST00000506036 1359 ntBASIC2.77□□□□□ -1.97
SCXQ7RTU7 AC010186.3-201ENST00000537616 2508 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
SCXQ7RTU7 BLM-208ENST00000560509 3966 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
SCXQ7RTU7 CNTD1-205ENST00000588527 1308 ntTSL 2 BASIC2.77□□□□□ -1.97
SCXQ7RTU7 AC004160.1-212ENST00000421121 2078 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
SCXQ7RTU7 EXTL2-201ENST00000370113 2835 ntAPPRIS P1 TSL 1 (best) BASIC2.77□□□□□ -1.97
SCXQ7RTU7 AL031985.3-201ENST00000565390 2449 ntBASIC2.77□□□□□ -1.97
SCXQ7RTU7 ARHGAP21-218ENST00000636789 4210 ntTSL 2 BASIC2.77□□□□□ -1.97
SCXQ7RTU7 TSHB-201ENST00000256592 537 ntAPPRIS P1 TSL 5 BASIC2.77□□□□□ -1.97
SCXQ7RTU7 SPRR2C-201ENST00000290702 219 ntBASIC2.77□□□□□ -1.97
SCXQ7RTU7 RNU1-15P-201ENST00000353977 144 ntBASIC2.77□□□□□ -1.97
SCXQ7RTU7 DNASE2B-202ENST00000370665 1269 ntAPPRIS P1 TSL 1 (best) BASIC2.77□□□□□ -1.97
SCXQ7RTU7 SAMD13-204ENST00000370671 724 ntTSL 3 BASIC2.77□□□□□ -1.97
SCXQ7RTU7 CARD6-202ENST00000381677 1094 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
SCXQ7RTU7 RNU1-63P-201ENST00000383902 164 ntBASIC2.77□□□□□ -1.97
SCXQ7RTU7 RNU1-44P-201ENST00000384453 163 ntBASIC2.77□□□□□ -1.97
SCXQ7RTU7 MIR3065-201ENST00000390137 79 ntBASIC2.77□□□□□ -1.97
SCXQ7RTU7 HNRNPDP2-201ENST00000406475 478 ntBASIC2.77□□□□□ -1.97
SCXQ7RTU7 SNORA11F-201ENST00000408237 128 ntBASIC2.77□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 93.6 ms