Protein–RNA interactions for Protein: Q5VTB9

RNF220, E3 ubiquitin-protein ligase RNF220, humanhuman

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220Q5VTB9 AC062004.1-201ENST00000518706 686 ntTSL 3 BASIC4.96□□□□□ -1.62
RNF220Q5VTB9 IGHVIII-2-1-201ENST00000518843 291 ntBASIC4.96□□□□□ -1.62
RNF220Q5VTB9 MTCO1P49-201ENST00000523429 802 ntBASIC4.96□□□□□ -1.62
RNF220Q5VTB9 RGS5-218ENST00000526176 574 ntTSL 4 BASIC4.96□□□□□ -1.62
RNF220Q5VTB9 AP003181.1-201ENST00000528811 445 ntTSL 3 BASIC4.96□□□□□ -1.62
RNF220Q5VTB9 AP001266.2-201ENST00000534505 464 ntTSL 4 BASIC4.96□□□□□ -1.62
RNF220Q5VTB9 GYPA-211ENST00000535709 695 ntAPPRIS ALT2 TSL 1 (best) BASIC4.96□□□□□ -1.62
RNF220Q5VTB9 AC084291.1-201ENST00000544667 548 ntTSL 2 BASIC4.96□□□□□ -1.62
RNF220Q5VTB9 OR7K1P-201ENST00000546439 926 ntBASIC4.96□□□□□ -1.62
RNF220Q5VTB9 FLVCR2-207ENST00000555027 938 ntTSL 3 BASIC4.96□□□□□ -1.62
RNF220Q5VTB9 DISC1FP1-201ENST00000561596 545 ntTSL 5 BASIC4.96□□□□□ -1.62
RNF220Q5VTB9 MIR4637-201ENST00000582405 84 ntBASIC4.96□□□□□ -1.62
RNF220Q5VTB9 AC011518.1-202ENST00000592668 407 ntTSL 5 BASIC4.96□□□□□ -1.62
RNF220Q5VTB9 AC083899.3-201ENST00000603413 594 ntBASIC4.96□□□□□ -1.62
RNF220Q5VTB9 AL596327.1-201ENST00000603629 213 ntBASIC4.96□□□□□ -1.62
RNF220Q5VTB9 ZRANB2-AS2-218ENST00000608360 722 ntTSL 5 BASIC4.96□□□□□ -1.62
RNF220Q5VTB9 AC112250.2-201ENST00000609450 491 ntTSL 3 BASIC4.96□□□□□ -1.62
RNF220Q5VTB9 AC132068.1-201ENST00000623805 459 ntBASIC4.96□□□□□ -1.62
RNF220Q5VTB9 LINC01837-206ENST00000636649 1056 ntTSL 5 BASIC4.96□□□□□ -1.62
RNF220Q5VTB9 GRIK2-204ENST00000369137 4272 ntTSL 5 BASIC4.96□□□□□ -1.62
RNF220Q5VTB9 RNF111-212ENST00000561186 4536 ntTSL 2 BASIC4.96□□□□□ -1.62
RNF220Q5VTB9 DAZ4-205ENST00000440066 1891 ntTSL 5 BASIC4.96□□□□□ -1.62
RNF220Q5VTB9 DAZ1-206ENST00000620725 1891 ntTSL 5 BASIC4.96□□□□□ -1.62
RNF220Q5VTB9 PDE5A-203ENST00000394439 6770 ntAPPRIS ALT2 TSL 5 BASIC4.96□□□□□ -1.62
RNF220Q5VTB9 OR4S2-202ENST00000641692 2211 ntAPPRIS P1 BASIC4.96□□□□□ -1.62
RNF220Q5VTB9 SPEF2-216ENST00000637569 7350 ntAPPRIS ALT2 TSL 5 BASIC4.96□□□□□ -1.62
RNF220Q5VTB9 CTXN2-201ENST00000417307 2828 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
RNF220Q5VTB9 ZBTB44-210ENST00000530205 2179 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
RNF220Q5VTB9 ADCY10-202ENST00000367851 5051 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
RNF220Q5VTB9 ARHGEF6-203ENST00000370622 4779 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
RNF220Q5VTB9 IL2-201ENST00000226730 1029 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
RNF220Q5VTB9 IL3-201ENST00000296870 1050 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
RNF220Q5VTB9 OR9G4-201ENST00000302957 984 ntBASIC4.95□□□□□ -1.62
RNF220Q5VTB9 OR2M5-201ENST00000366476 939 ntAPPRIS P1 BASIC4.95□□□□□ -1.62
RNF220Q5VTB9 PRH2-201ENST00000381847 641 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
RNF220Q5VTB9 CEACAMP8-201ENST00000413902 580 ntBASIC4.95□□□□□ -1.62
RNF220Q5VTB9 OR6E1P-201ENST00000414424 923 ntBASIC4.95□□□□□ -1.62
RNF220Q5VTB9 QRSL1P2-201ENST00000418582 964 ntBASIC4.95□□□□□ -1.62
RNF220Q5VTB9 SRSF1P1-201ENST00000424058 520 ntBASIC4.95□□□□□ -1.62
RNF220Q5VTB9 AC005033.1-201ENST00000428904 813 ntBASIC4.95□□□□□ -1.62
RNF220Q5VTB9 ISCA1P2-201ENST00000438679 421 ntBASIC4.95□□□□□ -1.62
RNF220Q5VTB9 ELOCP8-201ENST00000439309 332 ntBASIC4.95□□□□□ -1.62
RNF220Q5VTB9 ELOCP15-201ENST00000442090 332 ntBASIC4.95□□□□□ -1.62
RNF220Q5VTB9 AC064862.4-201ENST00000442180 334 ntBASIC4.95□□□□□ -1.62
RNF220Q5VTB9 LINC01880-201ENST00000446593 561 ntTSL 4 BASIC4.95□□□□□ -1.62
RNF220Q5VTB9 GAPDHP25-201ENST00000447061 1001 ntBASIC4.95□□□□□ -1.62
RNF220Q5VTB9 AC105399.1-202ENST00000447303 205 ntBASIC4.95□□□□□ -1.62
RNF220Q5VTB9 LINC01496-201ENST00000448761 460 ntTSL 5 BASIC4.95□□□□□ -1.62
RNF220Q5VTB9 LINC00456-201ENST00000453862 692 ntTSL 3 BASIC4.95□□□□□ -1.62
RNF220Q5VTB9 AC079168.1-201ENST00000458741 345 ntBASIC4.95□□□□□ -1.62
RNF220Q5VTB9 AC022133.1-201ENST00000490961 571 ntBASIC4.95□□□□□ -1.62
RNF220Q5VTB9 AC084117.1-201ENST00000496975 270 ntTSL 5 BASIC4.95□□□□□ -1.62
RNF220Q5VTB9 AC114981.1-201ENST00000503897 678 ntBASIC4.95□□□□□ -1.62
RNF220Q5VTB9 AC112198.1-201ENST00000505369 1220 ntBASIC4.95□□□□□ -1.62
RNF220Q5VTB9 SEMA6A-AS1-202ENST00000508424 862 ntTSL 3 BASIC4.95□□□□□ -1.62
RNF220Q5VTB9 RPL37-204ENST00000508493 553 ntAPPRIS ALT1 TSL 1 (best) BASIC4.95□□□□□ -1.62
RNF220Q5VTB9 LTV1P1-201ENST00000510683 1237 ntBASIC4.95□□□□□ -1.62
RNF220Q5VTB9 AC021146.3-201ENST00000511911 260 ntBASIC4.95□□□□□ -1.62
RNF220Q5VTB9 OR4A45P-201ENST00000529954 901 ntBASIC4.95□□□□□ -1.62
RNF220Q5VTB9 AC022882.1-201ENST00000532142 501 ntBASIC4.95□□□□□ -1.62
RNF220Q5VTB9 AP005436.3-201ENST00000532849 572 ntTSL 5 BASIC4.95□□□□□ -1.62
RNF220Q5VTB9 CACNA1C-AS4-201ENST00000544415 735 ntTSL 3 BASIC4.95□□□□□ -1.62
RNF220Q5VTB9 AKIRIN1P1-201ENST00000547384 544 ntBASIC4.95□□□□□ -1.62
RNF220Q5VTB9 AL390816.1-201ENST00000553990 322 ntTSL 3 BASIC4.95□□□□□ -1.62
RNF220Q5VTB9 CYCSP2-201ENST00000558168 301 ntBASIC4.95□□□□□ -1.62
RNF220Q5VTB9 AC005341.1-201ENST00000571086 708 ntBASIC4.95□□□□□ -1.62
RNF220Q5VTB9 MIR3915-201ENST00000578518 97 ntBASIC4.95□□□□□ -1.62
RNF220Q5VTB9 MIR4505-201ENST00000582238 73 ntBASIC4.95□□□□□ -1.62
RNF220Q5VTB9 AP005242.1-201ENST00000583946 467 ntTSL 3 BASIC4.95□□□□□ -1.62
RNF220Q5VTB9 AC020914.6-201ENST00000594327 272 ntBASIC4.95□□□□□ -1.62
RNF220Q5VTB9 AC097467.3-209ENST00000595760 615 ntTSL 5 BASIC4.95□□□□□ -1.62
RNF220Q5VTB9 LINC00347-205ENST00000597518 868 ntTSL 5 BASIC4.95□□□□□ -1.62
RNF220Q5VTB9 RNU6-88P-201ENST00000606801 100 ntBASIC4.95□□□□□ -1.62
RNF220Q5VTB9 AL159169.3-201ENST00000608871 561 ntBASIC4.95□□□□□ -1.62
RNF220Q5VTB9 AC007494.3-201ENST00000624660 743 ntBASIC4.95□□□□□ -1.62
RNF220Q5VTB9 AL158835.1-203ENST00000415305 3149 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
RNF220Q5VTB9 CTAGE5-210ENST00000553728 4392 ntAPPRIS ALT2 TSL 5 BASIC4.95□□□□□ -1.62
RNF220Q5VTB9 IPO5-201ENST00000261574 6003 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
RNF220Q5VTB9 ELOVL7-203ENST00000505959 4165 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
RNF220Q5VTB9 CSMD3-203ENST00000343508 13018 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
RNF220Q5VTB9 GABRG2-214ENST00000639111 11735 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
RNF220Q5VTB9 USP8-204ENST00000425032 3559 ntTSL 2 BASIC4.95□□□□□ -1.62
RNF220Q5VTB9 WDR5B-201ENST00000330689 3720 ntAPPRIS P1 BASIC4.95□□□□□ -1.62
RNF220Q5VTB9 DLGAP5-202ENST00000395425 2954 ntAPPRIS ALT2 TSL 1 (best) BASIC4.95□□□□□ -1.62
RNF220Q5VTB9 C21orf91-201ENST00000284881 5433 ntAPPRIS P4 TSL 2 BASIC4.94□□□□□ -1.62
RNF220Q5VTB9 AL592148.3-201ENST00000608771 2646 ntBASIC4.94□□□□□ -1.62
RNF220Q5VTB9 ELL2P3-201ENST00000457883 1602 ntBASIC4.94□□□□□ -1.62
RNF220Q5VTB9 AL355306.2-205ENST00000635395 1646 ntTSL 5 BASIC4.94□□□□□ -1.62
RNF220Q5VTB9 MYBPC1-204ENST00000452455 3861 ntAPPRIS ALT2 TSL 2 BASIC4.94□□□□□ -1.62
RNF220Q5VTB9 ARID2-202ENST00000422737 5481 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
RNF220Q5VTB9 CFAP221-215ENST00000598644 1532 ntTSL 2 BASIC4.94□□□□□ -1.62
RNF220Q5VTB9 RN7SKP153-201ENST00000365026 316 ntBASIC4.94□□□□□ -1.62
RNF220Q5VTB9 SF3B1-202ENST00000409915 600 ntTSL 2 BASIC4.94□□□□□ -1.62
RNF220Q5VTB9 AC012499.1-201ENST00000412133 741 ntTSL 5 BASIC4.94□□□□□ -1.62
RNF220Q5VTB9 OR8G2P-201ENST00000412796 908 ntBASIC4.94□□□□□ -1.62
RNF220Q5VTB9 AC104653.1-201ENST00000420579 578 ntTSL 2 BASIC4.94□□□□□ -1.62
RNF220Q5VTB9 AC019178.2-201ENST00000423595 505 ntBASIC4.94□□□□□ -1.62
RNF220Q5VTB9 AL451042.1-201ENST00000426353 544 ntTSL 3 BASIC4.94□□□□□ -1.62
RNF220Q5VTB9 AL034405.1-201ENST00000432062 526 ntTSL 2 BASIC4.94□□□□□ -1.62
RNF220Q5VTB9 AC022537.1-201ENST00000435271 446 ntTSL 3 BASIC4.94□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 143.5 ms