Protein–RNA interactions for Protein: Q5VT25

CDC42BPA, Serine/threonine-protein kinase MRCK alpha, humanhuman

Predictions only

Length 1,732 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPAQ5VT25 AP000942.1-201ENST00000463969 747 ntBASIC5.33□□□□□ -1.56
CDC42BPAQ5VT25 AC139783.2-201ENST00000504847 1145 ntBASIC5.33□□□□□ -1.56
CDC42BPAQ5VT25 LINC01088-205ENST00000509088 756 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
CDC42BPAQ5VT25 AC107032.2-201ENST00000551082 386 ntTSL 3 BASIC5.33□□□□□ -1.56
CDC42BPAQ5VT25 ACTR3BP1-201ENST00000605584 1247 ntBASIC5.33□□□□□ -1.56
CDC42BPAQ5VT25 MCF2-202ENST00000370573 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC5.33□□□□□ -1.56
CDC42BPAQ5VT25 UBR4-204ENST00000375254 15906 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
CDC42BPAQ5VT25 HUWE1-214ENST00000612484 14311 ntTSL 5 BASIC5.33□□□□□ -1.56
CDC42BPAQ5VT25 UBE2W-203ENST00000517608 8426 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
CDC42BPAQ5VT25 OR52E4-202ENST00000641726 2947 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
CDC42BPAQ5VT25 AC007656.2-201ENST00000624902 4547 ntBASIC5.33□□□□□ -1.56
CDC42BPAQ5VT25 THEMIS-205ENST00000626040 3179 ntAPPRIS ALT2 TSL 2 BASIC5.32□□□□□ -1.56
CDC42BPAQ5VT25 ZRANB3-201ENST00000264159 4046 ntAPPRIS P3 TSL 1 (best) BASIC5.32□□□□□ -1.56
CDC42BPAQ5VT25 MTTP-201ENST00000265517 4037 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
CDC42BPAQ5VT25 TENM1-202ENST00000422452 12891 ntAPPRIS ALT1 TSL 1 (best) BASIC5.32□□□□□ -1.56
CDC42BPAQ5VT25 SETP15-201ENST00000412724 337 ntBASIC5.32□□□□□ -1.56
CDC42BPAQ5VT25 AC104170.2-201ENST00000424246 678 ntTSL 3 BASIC5.32□□□□□ -1.56
CDC42BPAQ5VT25 AC005008.2-202ENST00000447776 439 ntTSL 3 BASIC5.32□□□□□ -1.56
CDC42BPAQ5VT25 AC109925.1-201ENST00000478069 331 ntBASIC5.32□□□□□ -1.56
CDC42BPAQ5VT25 RAP1B-201ENST00000250559 13438 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
CDC42BPAQ5VT25 AL031595.2-201ENST00000624215 19071 ntBASIC5.32□□□□□ -1.56
CDC42BPAQ5VT25 AC096751.1-201ENST00000515178 2202 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
CDC42BPAQ5VT25 STARD9-201ENST00000290607 15567 ntAPPRIS P1 TSL 5 BASIC5.32□□□□□ -1.56
CDC42BPAQ5VT25 AL353743.1-202ENST00000431724 1695 ntBASIC5.32□□□□□ -1.56
CDC42BPAQ5VT25 AL645937.1-201ENST00000641739 1652 ntBASIC5.32□□□□□ -1.56
CDC42BPAQ5VT25 TTC3-204ENST00000399017 10363 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
CDC42BPAQ5VT25 OR5W2-201ENST00000344514 933 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
CDC42BPAQ5VT25 LINC01048-201ENST00000414480 511 ntTSL 2 BASIC5.31□□□□□ -1.56
CDC42BPAQ5VT25 AC073587.1-201ENST00000447093 876 ntBASIC5.31□□□□□ -1.56
CDC42BPAQ5VT25 RNA5SP154-201ENST00000516193 111 ntBASIC5.31□□□□□ -1.56
CDC42BPAQ5VT25 AC006518.2-202ENST00000544947 297 ntTSL 2 BASIC5.31□□□□□ -1.56
CDC42BPAQ5VT25 UBE2NP1-201ENST00000545592 458 ntBASIC5.31□□□□□ -1.56
CDC42BPAQ5VT25 LINC00519-201ENST00000557518 682 ntTSL 2 BASIC5.31□□□□□ -1.56
CDC42BPAQ5VT25 BNIP3P11-201ENST00000603878 563 ntBASIC5.31□□□□□ -1.56
CDC42BPAQ5VT25 AC244517.5-201ENST00000624139 722 ntTSL 3 BASIC5.31□□□□□ -1.56
CDC42BPAQ5VT25 ATP2B1-203ENST00000393164 3127 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
CDC42BPAQ5VT25 VNN2-201ENST00000326499 2118 ntAPPRIS P4 TSL 1 (best) BASIC5.31□□□□□ -1.56
CDC42BPAQ5VT25 FTX-210ENST00000603037 8347 ntTSL 5 BASIC5.31□□□□□ -1.56
CDC42BPAQ5VT25 EFHC1-205ENST00000538167 5308 ntTSL 5 BASIC5.31□□□□□ -1.56
CDC42BPAQ5VT25 ATP13A3-211ENST00000619199 5227 ntTSL 2 BASIC5.31□□□□□ -1.56
CDC42BPAQ5VT25 LRP6-201ENST00000261349 10020 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
CDC42BPAQ5VT25 GNG5P1-201ENST00000255500 204 ntBASIC5.31□□□□□ -1.56
CDC42BPAQ5VT25 AC084357.1-201ENST00000473404 255 ntBASIC5.31□□□□□ -1.56
CDC42BPAQ5VT25 TAF8-207ENST00000482432 556 ntTSL 2 BASIC5.31□□□□□ -1.56
CDC42BPAQ5VT25 SPINK13-203ENST00000512953 1022 ntAPPRIS P2 TSL 2 BASIC5.31□□□□□ -1.56
CDC42BPAQ5VT25 IGHV3-63-201ENST00000518422 341 ntBASIC5.31□□□□□ -1.56
CDC42BPAQ5VT25 AF001550.1-201ENST00000572747 573 ntTSL 4 BASIC5.31□□□□□ -1.56
CDC42BPAQ5VT25 EIF1P6-201ENST00000600054 334 ntBASIC5.31□□□□□ -1.56
CDC42BPAQ5VT25 IQGAP2-202ENST00000379730 5442 ntTSL 5 BASIC5.31□□□□□ -1.56
CDC42BPAQ5VT25 PRKACB-219ENST00000614872 4306 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
CDC42BPAQ5VT25 TAX1BP1-213ENST00000543117 3365 ntAPPRIS ALT2 TSL 2 BASIC5.31□□□□□ -1.56
CDC42BPAQ5VT25 CNOT10-206ENST00000454516 2760 ntTSL 2 BASIC5.3□□□□□ -1.56
CDC42BPAQ5VT25 XRN1-201ENST00000264951 10143 ntAPPRIS P3 TSL 1 (best) BASIC5.3□□□□□ -1.56
CDC42BPAQ5VT25 AKAP11-201ENST00000025301 9920 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
CDC42BPAQ5VT25 CACNB4-243ENST00000637217 8188 ntTSL 5 BASIC5.3□□□□□ -1.56
CDC42BPAQ5VT25 DDX6P1-205ENST00000441966 1436 ntBASIC5.3□□□□□ -1.56
CDC42BPAQ5VT25 AC092435.4-201ENST00000623012 4159 ntBASIC5.3□□□□□ -1.56
CDC42BPAQ5VT25 ABCA5-208ENST00000588877 6525 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
CDC42BPAQ5VT25 FIGNL1-212ENST00000613602 3187 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
CDC42BPAQ5VT25 AC068254.2-201ENST00000623938 3577 ntBASIC5.3□□□□□ -1.56
CDC42BPAQ5VT25 NFIB-210ENST00000543693 7622 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
CDC42BPAQ5VT25 AC063979.1-201ENST00000415539 377 ntBASIC5.3□□□□□ -1.56
CDC42BPAQ5VT25 AL445259.1-202ENST00000434768 379 ntTSL 3 BASIC5.3□□□□□ -1.56
CDC42BPAQ5VT25 AC006994.1-201ENST00000438212 839 ntBASIC5.3□□□□□ -1.56
CDC42BPAQ5VT25 AC007953.1-201ENST00000450500 560 ntTSL 4 BASIC5.3□□□□□ -1.56
CDC42BPAQ5VT25 AL450344.1-201ENST00000456018 639 ntTSL 2 BASIC5.3□□□□□ -1.56
CDC42BPAQ5VT25 AC073522.1-201ENST00000483312 377 ntBASIC5.3□□□□□ -1.56
CDC42BPAQ5VT25 LINC01327-201ENST00000498413 535 ntTSL 3 BASIC5.3□□□□□ -1.56
CDC42BPAQ5VT25 FCF1P8-201ENST00000510322 597 ntBASIC5.3□□□□□ -1.56
CDC42BPAQ5VT25 NCAPGP2-201ENST00000557911 754 ntBASIC5.3□□□□□ -1.56
CDC42BPAQ5VT25 AC027807.1-201ENST00000559921 996 ntBASIC5.3□□□□□ -1.56
CDC42BPAQ5VT25 LINC02266-201ENST00000610239 1151 ntTSL 3 BASIC5.3□□□□□ -1.56
CDC42BPAQ5VT25 AC022149.2-201ENST00000621061 203 ntBASIC5.3□□□□□ -1.56
CDC42BPAQ5VT25 BMP5-201ENST00000370830 3952 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
CDC42BPAQ5VT25 ZFYVE16-202ENST00000505560 6599 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
CDC42BPAQ5VT25 SUCNR1-201ENST00000362032 4181 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
CDC42BPAQ5VT25 WDFY3-201ENST00000295888 14247 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
CDC42BPAQ5VT25 AL078595.2-201ENST00000605309 1780 ntBASIC5.29□□□□□ -1.56
CDC42BPAQ5VT25 SLC30A7-201ENST00000357650 1281 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
CDC42BPAQ5VT25 DEFB116-201ENST00000400549 309 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
CDC42BPAQ5VT25 EPGN-202ENST00000413830 1196 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
CDC42BPAQ5VT25 AL354766.2-201ENST00000414085 423 ntTSL 2 BASIC5.29□□□□□ -1.56
CDC42BPAQ5VT25 AC245052.1-201ENST00000426213 410 ntTSL 3 BASIC5.29□□□□□ -1.56
CDC42BPAQ5VT25 LINC00278-202ENST00000444263 587 ntTSL 3 BASIC5.29□□□□□ -1.56
CDC42BPAQ5VT25 RPS3AP14-201ENST00000483907 780 ntBASIC5.29□□□□□ -1.56
CDC42BPAQ5VT25 RPL32P34-201ENST00000486380 400 ntBASIC5.29□□□□□ -1.56
CDC42BPAQ5VT25 AC105180.1-201ENST00000523317 426 ntTSL 3 BASIC5.29□□□□□ -1.56
CDC42BPAQ5VT25 AC011611.1-201ENST00000552179 197 ntBASIC5.29□□□□□ -1.56
CDC42BPAQ5VT25 AL049840.6-202ENST00000603373 279 ntBASIC5.29□□□□□ -1.56
CDC42BPAQ5VT25 MIR7851-201ENST00000610611 160 ntBASIC5.29□□□□□ -1.56
CDC42BPAQ5VT25 AC135507.2-201ENST00000612443 309 ntBASIC5.29□□□□□ -1.56
CDC42BPAQ5VT25 ARID2-202ENST00000422737 5481 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
CDC42BPAQ5VT25 LINC00862-204ENST00000637098 1400 ntTSL 5 BASIC5.29□□□□□ -1.56
CDC42BPAQ5VT25 PRLR-220ENST00000620785 11063 ntTSL 5 BASIC5.29□□□□□ -1.56
CDC42BPAQ5VT25 DDR2-202ENST00000367922 10160 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
CDC42BPAQ5VT25 NBEAL1-203ENST00000449802 10938 ntAPPRIS P1 TSL 5 BASIC5.29□□□□□ -1.56
CDC42BPAQ5VT25 RSL24D1P1-201ENST00000404972 493 ntBASIC5.28□□□□□ -1.56
CDC42BPAQ5VT25 GRM7-AS1-201ENST00000420230 430 ntTSL 3 BASIC5.28□□□□□ -1.56
CDC42BPAQ5VT25 HSPE1P27-201ENST00000430808 296 ntBASIC5.28□□□□□ -1.56
CDC42BPAQ5VT25 AC078993.1-203ENST00000435789 1037 ntTSL 5 BASIC5.28□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 94.9 ms