Protein–RNA interactions for Protein: Q5TC82

RC3H1, Roquin-1, humanhuman

Known RBP Predictions only

Length 1,133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1Q5TC82 C2CD5-206ENST00000536386 3496 ntTSL 1 (best) BASIC7.46□□□□□ -1.22
RC3H1Q5TC82 ZRANB3-210ENST00000536680 6943 ntTSL 1 (best) BASIC7.46□□□□□ -1.22
RC3H1Q5TC82 AFP-201ENST00000226359 1914 ntTSL 5 BASIC7.46□□□□□ -1.22
RC3H1Q5TC82 PBRM1-207ENST00000409767 4849 ntTSL 1 (best) BASIC7.46□□□□□ -1.22
RC3H1Q5TC82 MIER3-205ENST00000409421 2152 ntTSL 2 BASIC7.46□□□□□ -1.22
RC3H1Q5TC82 UNC13B-209ENST00000635942 14550 ntAPPRIS ALT2 TSL 5 BASIC7.46□□□□□ -1.22
RC3H1Q5TC82 ELL2P4-201ENST00000446870 1376 ntBASIC7.46□□□□□ -1.22
RC3H1Q5TC82 MAP3K7CL-209ENST00000399947 2003 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
RC3H1Q5TC82 MOB1B-201ENST00000309395 6963 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
RC3H1Q5TC82 ZNF404-201ENST00000324394 1844 ntAPPRIS ALT2 TSL 1 (best) BASIC7.45□□□□□ -1.22
RC3H1Q5TC82 TM9SF4-202ENST00000398022 3978 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
RC3H1Q5TC82 ZRANB3-211ENST00000619650 2494 ntTSL 5 BASIC7.45□□□□□ -1.22
RC3H1Q5TC82 LINC01963-201ENST00000562038 3148 ntBASIC7.45□□□□□ -1.22
RC3H1Q5TC82 RPTN-201ENST00000316073 3569 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
RC3H1Q5TC82 ANKS1B-216ENST00000549558 2268 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
RC3H1Q5TC82 FOCAD-216ENST00000605086 4195 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
RC3H1Q5TC82 FAS-203ENST00000355279 983 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
RC3H1Q5TC82 SPANXN1-201ENST00000370493 1276 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
RC3H1Q5TC82 AL672167.2-201ENST00000377164 879 ntBASIC7.45□□□□□ -1.22
RC3H1Q5TC82 RNU6-1297P-201ENST00000384415 104 ntBASIC7.45□□□□□ -1.22
RC3H1Q5TC82 AL645927.1-201ENST00000396783 406 ntBASIC7.45□□□□□ -1.22
RC3H1Q5TC82 NPM1P38-201ENST00000403835 865 ntBASIC7.45□□□□□ -1.22
RC3H1Q5TC82 RN7SKP106-201ENST00000410832 272 ntBASIC7.45□□□□□ -1.22
RC3H1Q5TC82 RBM6-203ENST00000421682 684 ntTSL 2 BASIC7.45□□□□□ -1.22
RC3H1Q5TC82 AL589872.1-201ENST00000426602 288 ntBASIC7.45□□□□□ -1.22
RC3H1Q5TC82 LINC01501-201ENST00000427523 409 ntTSL 3 BASIC7.45□□□□□ -1.22
RC3H1Q5TC82 AL606489.2-201ENST00000433886 234 ntBASIC7.45□□□□□ -1.22
RC3H1Q5TC82 GYPE-202ENST00000437468 499 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
RC3H1Q5TC82 AC011742.2-201ENST00000443818 352 ntBASIC7.45□□□□□ -1.22
RC3H1Q5TC82 AL035634.1-201ENST00000446768 372 ntTSL 2 BASIC7.45□□□□□ -1.22
RC3H1Q5TC82 AC091685.2-201ENST00000454924 864 ntBASIC7.45□□□□□ -1.22
RC3H1Q5TC82 BTF3P15-201ENST00000455606 336 ntBASIC7.45□□□□□ -1.22
RC3H1Q5TC82 AC092620.2-201ENST00000458007 744 ntTSL 2 BASIC7.45□□□□□ -1.22
RC3H1Q5TC82 RNU6-329P-201ENST00000459618 107 ntBASIC7.45□□□□□ -1.22
RC3H1Q5TC82 AC008953.1-201ENST00000497334 318 ntBASIC7.45□□□□□ -1.22
RC3H1Q5TC82 AC092916.1-201ENST00000497896 411 ntTSL 3 BASIC7.45□□□□□ -1.22
RC3H1Q5TC82 SUMO2P7-201ENST00000511179 285 ntBASIC7.45□□□□□ -1.22
RC3H1Q5TC82 LINC01256-201ENST00000513270 508 ntTSL 2 BASIC7.45□□□□□ -1.22
RC3H1Q5TC82 RNU4-49P-201ENST00000516080 140 ntBASIC7.45□□□□□ -1.22
RC3H1Q5TC82 AC021678.3-201ENST00000517893 476 ntBASIC7.45□□□□□ -1.22
RC3H1Q5TC82 PYDC2-201ENST00000518817 294 ntAPPRIS P1 BASIC7.45□□□□□ -1.22
RC3H1Q5TC82 RNU6-988P-201ENST00000519081 107 ntBASIC7.45□□□□□ -1.22
RC3H1Q5TC82 BAALC-AS1-205ENST00000521102 613 ntTSL 3 BASIC7.45□□□□□ -1.22
RC3H1Q5TC82 AP001636.3-202ENST00000525714 894 ntTSL 3 BASIC7.45□□□□□ -1.22
RC3H1Q5TC82 AP001189.6-201ENST00000528781 831 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
RC3H1Q5TC82 AC008269.2-201ENST00000561915 1105 ntBASIC7.45□□□□□ -1.22
RC3H1Q5TC82 AC074050.3-201ENST00000569175 441 ntTSL 4 BASIC7.45□□□□□ -1.22
RC3H1Q5TC82 AC021646.1-201ENST00000605469 484 ntBASIC7.45□□□□□ -1.22
RC3H1Q5TC82 AC012603.1-201ENST00000606424 528 ntBASIC7.45□□□□□ -1.22
RC3H1Q5TC82 MIR98-201ENST00000606724 119 ntBASIC7.45□□□□□ -1.22
RC3H1Q5TC82 RPL36A-210ENST00000614077 881 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
RC3H1Q5TC82 AC233309.1-201ENST00000619522 751 ntBASIC7.45□□□□□ -1.22
RC3H1Q5TC82 MIR8080-201ENST00000622224 89 ntBASIC7.45□□□□□ -1.22
RC3H1Q5TC82 MTND4LP32-201ENST00000636111 270 ntBASIC7.45□□□□□ -1.22
RC3H1Q5TC82 hsa-mir-4536-1.1-201ENST00000636519 88 ntBASIC7.45□□□□□ -1.22
RC3H1Q5TC82 TMEFF2-203ENST00000409056 3364 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
RC3H1Q5TC82 NOL8-214ENST00000535387 3390 ntAPPRIS ALT2 TSL 5 BASIC7.45□□□□□ -1.22
RC3H1Q5TC82 ZNF148-201ENST00000360647 9651 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
RC3H1Q5TC82 ALS2CR12-203ENST00000405148 2013 ntAPPRIS P3 TSL 5 BASIC7.45□□□□□ -1.22
RC3H1Q5TC82 FOXJ3-204ENST00000372572 5352 ntAPPRIS P3 TSL 1 (best) BASIC7.45□□□□□ -1.22
RC3H1Q5TC82 IL20-202ENST00000367098 1553 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
RC3H1Q5TC82 ZNF658B-201ENST00000602828 3408 ntBASIC7.45□□□□□ -1.22
RC3H1Q5TC82 OR2T7-201ENST00000641057 3463 ntAPPRIS P1 BASIC7.44□□□□□ -1.22
RC3H1Q5TC82 GABRR1-206ENST00000611484 3259 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
RC3H1Q5TC82 DICER1-201ENST00000343455 10277 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
RC3H1Q5TC82 EXTL2-201ENST00000370113 2835 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
RC3H1Q5TC82 TBCK-205ENST00000432496 3362 ntAPPRIS P1 TSL 2 BASIC7.44□□□□□ -1.22
RC3H1Q5TC82 NCAPG2-202ENST00000409339 5253 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
RC3H1Q5TC82 RAPGEF4-204ENST00000409036 3975 ntTSL 5 BASIC7.44□□□□□ -1.22
RC3H1Q5TC82 GCSAML-202ENST00000366489 4030 ntAPPRIS ALT2 TSL 2 BASIC7.44□□□□□ -1.22
RC3H1Q5TC82 TNPO1P2-201ENST00000426249 2665 ntBASIC7.44□□□□□ -1.22
RC3H1Q5TC82 AL159987.1-201ENST00000347911 293 ntBASIC7.44□□□□□ -1.22
RC3H1Q5TC82 Y_RNA.28-201ENST00000362554 111 ntBASIC7.44□□□□□ -1.22
RC3H1Q5TC82 CUBN-201ENST00000377823 705 ntTSL 3 BASIC7.44□□□□□ -1.22
RC3H1Q5TC82 SNORD116-29-201ENST00000384516 83 ntBASIC7.44□□□□□ -1.22
RC3H1Q5TC82 HSDL2-201ENST00000398803 2983 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
RC3H1Q5TC82 RPS4XP8-201ENST00000402039 771 ntBASIC7.44□□□□□ -1.22
RC3H1Q5TC82 AC025946.1-201ENST00000413286 430 ntTSL 3 BASIC7.44□□□□□ -1.22
RC3H1Q5TC82 OR51AB1P-201ENST00000429046 620 ntBASIC7.44□□□□□ -1.22
RC3H1Q5TC82 FTH1P16-201ENST00000435241 552 ntBASIC7.44□□□□□ -1.22
RC3H1Q5TC82 AC010235.1-201ENST00000450613 547 ntTSL 3 BASIC7.44□□□□□ -1.22
RC3H1Q5TC82 AC112187.1-201ENST00000455837 479 ntBASIC7.44□□□□□ -1.22
RC3H1Q5TC82 MRE11P1-201ENST00000464884 2127 ntBASIC7.44□□□□□ -1.22
RC3H1Q5TC82 AOX3P-204ENST00000491025 2107 ntBASIC7.44□□□□□ -1.22
RC3H1Q5TC82 AC124893.1-201ENST00000496247 545 ntTSL 5 BASIC7.44□□□□□ -1.22
RC3H1Q5TC82 AC080013.1-206ENST00000496842 712 ntTSL 2 BASIC7.44□□□□□ -1.22
RC3H1Q5TC82 AC010587.1-201ENST00000505809 469 ntBASIC7.44□□□□□ -1.22
RC3H1Q5TC82 AC006390.1-201ENST00000508068 283 ntBASIC7.44□□□□□ -1.22
RC3H1Q5TC82 AC034234.1-202ENST00000508696 339 ntTSL 3 BASIC7.44□□□□□ -1.22
RC3H1Q5TC82 AC108866.1-202ENST00000511064 573 ntTSL 4 BASIC7.44□□□□□ -1.22
RC3H1Q5TC82 RNU6-559P-201ENST00000516151 98 ntBASIC7.44□□□□□ -1.22
RC3H1Q5TC82 LINC00861-202ENST00000517869 606 ntTSL 5 BASIC7.44□□□□□ -1.22
RC3H1Q5TC82 AC100801.1-202ENST00000518266 371 ntTSL 3 BASIC7.44□□□□□ -1.22
RC3H1Q5TC82 HMGB1P41-201ENST00000520234 440 ntBASIC7.44□□□□□ -1.22
RC3H1Q5TC82 AC022634.1-201ENST00000520765 532 ntBASIC7.44□□□□□ -1.22
RC3H1Q5TC82 DEFB131D-201ENST00000526803 184 ntBASIC7.44□□□□□ -1.22
RC3H1Q5TC82 SLC2A13P1-201ENST00000531560 322 ntBASIC7.44□□□□□ -1.22
RC3H1Q5TC82 AP002812.4-201ENST00000532139 286 ntBASIC7.44□□□□□ -1.22
RC3H1Q5TC82 PIWIL4-203ENST00000537419 831 ntTSL 2 BASIC7.44□□□□□ -1.22
RC3H1Q5TC82 AC117505.1-202ENST00000547027 566 ntTSL 3 BASIC7.44□□□□□ -1.22
Retrieved 100 of 98,524 protein–RNA pairs in 109.6 ms