Protein–RNA interactions for Protein: Q496Y0

LONRF3, LON peptidase N-terminal domain and RING finger protein 3, humanhuman

Predictions only

Length 759 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LONRF3Q496Y0 TRIM69-201ENST00000329464 1901 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
LONRF3Q496Y0 TXNDC8-201ENST00000374507 1787 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
LONRF3Q496Y0 EIF2AP4-201ENST00000424793 1781 ntBASIC5.52□□□□□ -1.53
LONRF3Q496Y0 SLC9B1-202ENST00000394789 1735 ntAPPRIS ALT2 TSL 1 (best) BASIC5.52□□□□□ -1.53
LONRF3Q496Y0 SGO1P1-201ENST00000603525 1447 ntBASIC5.52□□□□□ -1.53
LONRF3Q496Y0 USP50-205ENST00000616326 1419 ntAPPRIS ALT2 TSL 5 BASIC5.52□□□□□ -1.53
LONRF3Q496Y0 CASC19-206ENST00000641028 1430 ntBASIC5.52□□□□□ -1.53
LONRF3Q496Y0 CSN1S1-201ENST00000246891 985 ntAPPRIS P3 TSL 1 (best) BASIC5.52□□□□□ -1.53
LONRF3Q496Y0 RNU6-1214P-201ENST00000363650 109 ntBASIC5.52□□□□□ -1.53
LONRF3Q496Y0 UBBP2-201ENST00000376781 231 ntBASIC5.52□□□□□ -1.53
LONRF3Q496Y0 SFR1P1-201ENST00000403720 688 ntBASIC5.52□□□□□ -1.53
LONRF3Q496Y0 FCF1P5-201ENST00000406490 482 ntBASIC5.52□□□□□ -1.53
LONRF3Q496Y0 AC096559.1-201ENST00000414086 399 ntTSL 2 BASIC5.52□□□□□ -1.53
LONRF3Q496Y0 AF186996.5-201ENST00000418098 904 ntBASIC5.52□□□□□ -1.53
LONRF3Q496Y0 RPS12P23-201ENST00000419579 400 ntBASIC5.52□□□□□ -1.53
LONRF3Q496Y0 AC079790.1-201ENST00000420365 507 ntTSL 3 BASIC5.52□□□□□ -1.53
LONRF3Q496Y0 AC092162.1-201ENST00000432828 434 ntBASIC5.52□□□□□ -1.53
LONRF3Q496Y0 AL512271.1-201ENST00000439878 434 ntTSL 3 BASIC5.52□□□□□ -1.53
LONRF3Q496Y0 AL139230.1-201ENST00000440094 425 ntTSL 3 BASIC5.52□□□□□ -1.53
LONRF3Q496Y0 AL161621.1-201ENST00000444796 340 ntTSL 3 BASIC5.52□□□□□ -1.53
LONRF3Q496Y0 GRM7-AS3-208ENST00000455623 947 ntTSL 3 BASIC5.52□□□□□ -1.53
LONRF3Q496Y0 USP9YP25-201ENST00000457708 443 ntBASIC5.52□□□□□ -1.53
LONRF3Q496Y0 AC126121.1-201ENST00000482313 553 ntBASIC5.52□□□□□ -1.53
LONRF3Q496Y0 AC008897.1-201ENST00000494006 347 ntBASIC5.52□□□□□ -1.53
LONRF3Q496Y0 AC083829.1-201ENST00000503756 657 ntBASIC5.52□□□□□ -1.53
LONRF3Q496Y0 AC034244.1-201ENST00000507687 207 ntBASIC5.52□□□□□ -1.53
LONRF3Q496Y0 AC115622.1-201ENST00000509628 587 ntTSL 3 BASIC5.52□□□□□ -1.53
LONRF3Q496Y0 TCP11X3P-202ENST00000514289 1254 ntBASIC5.52□□□□□ -1.53
LONRF3Q496Y0 AC104619.2-201ENST00000514293 646 ntTSL 3 BASIC5.52□□□□□ -1.53
LONRF3Q496Y0 SNORA3.4-201ENST00000515969 96 ntBASIC5.52□□□□□ -1.53
LONRF3Q496Y0 AP002444.1-201ENST00000534252 620 ntTSL 3 BASIC5.52□□□□□ -1.53
LONRF3Q496Y0 PCNPP1-201ENST00000552501 511 ntBASIC5.52□□□□□ -1.53
LONRF3Q496Y0 AC087477.6-201ENST00000559595 843 ntBASIC5.52□□□□□ -1.53
LONRF3Q496Y0 AP001180.3-201ENST00000582221 145 ntBASIC5.52□□□□□ -1.53
LONRF3Q496Y0 AC131274.1-201ENST00000582507 254 ntTSL 3 BASIC5.52□□□□□ -1.53
LONRF3Q496Y0 AC015688.2-201ENST00000584523 262 ntBASIC5.52□□□□□ -1.53
LONRF3Q496Y0 AC017100.2-201ENST00000584628 355 ntBASIC5.52□□□□□ -1.53
LONRF3Q496Y0 Z94722.1-201ENST00000604328 474 ntBASIC5.52□□□□□ -1.53
LONRF3Q496Y0 AC005084.1-201ENST00000605160 304 ntBASIC5.52□□□□□ -1.53
LONRF3Q496Y0 uc_338.18-201ENST00000615451 175 ntBASIC5.52□□□□□ -1.53
LONRF3Q496Y0 MIR8069-1-201ENST00000616627 86 ntBASIC5.52□□□□□ -1.53
LONRF3Q496Y0 MIR8069-2-201ENST00000621412 86 ntBASIC5.52□□□□□ -1.53
LONRF3Q496Y0 LINC02211-204ENST00000642024 1070 ntBASIC5.52□□□□□ -1.53
LONRF3Q496Y0 FOXP2-220ENST00000634411 4065 ntTSL 5 BASIC5.52□□□□□ -1.53
LONRF3Q496Y0 CSMD3-204ENST00000455883 12485 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
LONRF3Q496Y0 PSMA4-201ENST00000044462 4411 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
LONRF3Q496Y0 IL13RA2-201ENST00000243213 1371 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
LONRF3Q496Y0 MTND5P31-201ENST00000419366 1374 ntBASIC5.52□□□□□ -1.53
LONRF3Q496Y0 ZNF12-203ENST00000404360 4474 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
LONRF3Q496Y0 ZNF33CP-201ENST00000432492 2030 ntBASIC5.52□□□□□ -1.53
LONRF3Q496Y0 BDNF-AS-202ENST00000499568 2039 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
LONRF3Q496Y0 AC008505.1-201ENST00000637582 2025 ntTSL 5 BASIC5.52□□□□□ -1.53
LONRF3Q496Y0 AC008079.2-201ENST00000623543 20396 ntBASIC5.52□□□□□ -1.53
LONRF3Q496Y0 DDX18P5-201ENST00000534547 1306 ntBASIC5.51□□□□□ -1.53
LONRF3Q496Y0 FAM197Y9-201ENST00000451062 2332 ntTSL 5 BASIC5.51□□□□□ -1.53
LONRF3Q496Y0 IL5-201ENST00000231454 816 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
LONRF3Q496Y0 GNAS-202ENST00000306090 477 ntTSL 5 BASIC5.51□□□□□ -1.53
LONRF3Q496Y0 RNA5SP191-201ENST00000362585 102 ntBASIC5.51□□□□□ -1.53
LONRF3Q496Y0 RN7SKP149-201ENST00000363008 344 ntBASIC5.51□□□□□ -1.53
LONRF3Q496Y0 CNIH4-201ENST00000366856 808 ntAPPRIS ALT1 TSL 2 BASIC5.51□□□□□ -1.53
LONRF3Q496Y0 RNU6-1293P-201ENST00000384077 107 ntBASIC5.51□□□□□ -1.53
LONRF3Q496Y0 TAS2R31-201ENST00000390675 1021 ntAPPRIS P1 BASIC5.51□□□□□ -1.53
LONRF3Q496Y0 FAM26D-203ENST00000405399 1165 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
LONRF3Q496Y0 OR51A3P-201ENST00000413596 924 ntBASIC5.51□□□□□ -1.53
LONRF3Q496Y0 AL008987.1-201ENST00000415528 237 ntBASIC5.51□□□□□ -1.53
LONRF3Q496Y0 TBCAP2-201ENST00000416175 326 ntBASIC5.51□□□□□ -1.53
LONRF3Q496Y0 LINC01598-201ENST00000432067 460 ntTSL 3 BASIC5.51□□□□□ -1.53
LONRF3Q496Y0 RPL34P6-201ENST00000432390 345 ntBASIC5.51□□□□□ -1.53
LONRF3Q496Y0 YWHAZP8-201ENST00000436935 731 ntBASIC5.51□□□□□ -1.53
LONRF3Q496Y0 AL137076.1-201ENST00000441046 551 ntTSL 2 BASIC5.51□□□□□ -1.53
LONRF3Q496Y0 AC073648.4-201ENST00000442655 781 ntBASIC5.51□□□□□ -1.53
LONRF3Q496Y0 AL359715.2-201ENST00000452402 682 ntTSL 2 BASIC5.51□□□□□ -1.53
LONRF3Q496Y0 AC096543.1-201ENST00000455038 823 ntTSL 3 BASIC5.51□□□□□ -1.53
LONRF3Q496Y0 AC004872.1-201ENST00000456062 469 ntTSL 3 BASIC5.51□□□□□ -1.53
LONRF3Q496Y0 RPS29P33-201ENST00000456717 146 ntBASIC5.51□□□□□ -1.53
LONRF3Q496Y0 AL392086.1-201ENST00000457632 299 ntTSL 3 BASIC5.51□□□□□ -1.53
LONRF3Q496Y0 AC063943.1-201ENST00000465434 453 ntBASIC5.51□□□□□ -1.53
LONRF3Q496Y0 LRRC70-203ENST00000491184 703 ntTSL 3 BASIC5.51□□□□□ -1.53
LONRF3Q496Y0 LINC02198-201ENST00000504280 810 ntTSL 3 BASIC5.51□□□□□ -1.53
LONRF3Q496Y0 AC010230.1-202ENST00000506265 592 ntTSL 5 BASIC5.51□□□□□ -1.53
LONRF3Q496Y0 AC079380.1-201ENST00000507844 619 ntTSL 3 BASIC5.51□□□□□ -1.53
LONRF3Q496Y0 AC118282.2-201ENST00000508739 374 ntBASIC5.51□□□□□ -1.53
LONRF3Q496Y0 AC010486.3-201ENST00000511602 785 ntBASIC5.51□□□□□ -1.53
LONRF3Q496Y0 RNU2-30P-201ENST00000516209 141 ntBASIC5.51□□□□□ -1.53
LONRF3Q496Y0 Y_RNA.688-201ENST00000516565 95 ntBASIC5.51□□□□□ -1.53
LONRF3Q496Y0 AC134043.1-201ENST00000521204 638 ntTSL 3 BASIC5.51□□□□□ -1.53
LONRF3Q496Y0 HIGD1AP6-201ENST00000521833 279 ntBASIC5.51□□□□□ -1.53
LONRF3Q496Y0 AP001775.2-201ENST00000531710 334 ntTSL 2 BASIC5.51□□□□□ -1.53
LONRF3Q496Y0 AC087623.1-201ENST00000533301 377 ntTSL 3 BASIC5.51□□□□□ -1.53
LONRF3Q496Y0 AC135279.1-201ENST00000543493 504 ntBASIC5.51□□□□□ -1.53
LONRF3Q496Y0 CR383656.6-201ENST00000550518 394 ntBASIC5.51□□□□□ -1.53
LONRF3Q496Y0 AC074029.1-201ENST00000552531 1044 ntBASIC5.51□□□□□ -1.53
LONRF3Q496Y0 AL356804.1-201ENST00000553791 448 ntTSL 5 BASIC5.51□□□□□ -1.53
LONRF3Q496Y0 AC079075.1-201ENST00000559543 878 ntBASIC5.51□□□□□ -1.53
LONRF3Q496Y0 AL353708.2-201ENST00000567486 447 ntTSL 3 BASIC5.51□□□□□ -1.53
LONRF3Q496Y0 AP005230.1-201ENST00000585072 675 ntTSL 5 BASIC5.51□□□□□ -1.53
LONRF3Q496Y0 AC016493.1-201ENST00000586106 688 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
LONRF3Q496Y0 MIR4527HG-203ENST00000600127 704 ntTSL 5 BASIC5.51□□□□□ -1.53
LONRF3Q496Y0 AL390816.3-201ENST00000604527 1066 ntBASIC5.51□□□□□ -1.53
LONRF3Q496Y0 AP003117.2-201ENST00000606010 545 ntBASIC5.51□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 164.8 ms