Protein–RNA interactions for Protein: Q33E94

RFX4, Transcription factor RFX4, humanhuman

Predictions only

Length 735 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX4Q33E94 NPM1P24-201ENST00000428039 894 ntBASIC3.69□□□□□ -1.82
RFX4Q33E94 AC023128.1-201ENST00000432431 799 ntTSL 3 BASIC3.69□□□□□ -1.82
RFX4Q33E94 CD200R1-203ENST00000440122 847 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
RFX4Q33E94 AL353743.2-203ENST00000443630 492 ntTSL 3 BASIC3.69□□□□□ -1.82
RFX4Q33E94 NANOGP10-201ENST00000453325 895 ntBASIC3.69□□□□□ -1.82
RFX4Q33E94 AC009963.2-201ENST00000453431 138 ntBASIC3.69□□□□□ -1.82
RFX4Q33E94 AL392086.1-201ENST00000457632 299 ntTSL 3 BASIC3.69□□□□□ -1.82
RFX4Q33E94 snoU13.1-201ENST00000459157 104 ntBASIC3.69□□□□□ -1.82
RFX4Q33E94 AC092691.2-201ENST00000461787 803 ntBASIC3.69□□□□□ -1.82
RFX4Q33E94 AC018635.1-201ENST00000468292 1030 ntBASIC3.69□□□□□ -1.82
RFX4Q33E94 AC092924.1-201ENST00000496084 487 ntTSL 4 BASIC3.69□□□□□ -1.82
RFX4Q33E94 LINC02017-201ENST00000496829 474 ntTSL 3 BASIC3.69□□□□□ -1.82
RFX4Q33E94 MTCO1P31-201ENST00000506355 492 ntBASIC3.69□□□□□ -1.82
RFX4Q33E94 AC105031.3-201ENST00000524359 616 ntTSL 3 BASIC3.69□□□□□ -1.82
RFX4Q33E94 AL356215.1-201ENST00000528366 1102 ntTSL 2 BASIC3.69□□□□□ -1.82
RFX4Q33E94 AC005908.2-201ENST00000546078 530 ntTSL 3 BASIC3.69□□□□□ -1.82
RFX4Q33E94 AL139021.2-201ENST00000556390 399 ntTSL 3 BASIC3.69□□□□□ -1.82
RFX4Q33E94 TVP23BP1-201ENST00000557500 617 ntBASIC3.69□□□□□ -1.82
RFX4Q33E94 AC025627.2-201ENST00000576220 160 ntBASIC3.69□□□□□ -1.82
RFX4Q33E94 MIR4330-201ENST00000579077 105 ntBASIC3.69□□□□□ -1.82
RFX4Q33E94 KLHL23-207ENST00000602521 630 ntTSL 3 BASIC3.69□□□□□ -1.82
RFX4Q33E94 AC083899.3-201ENST00000603413 594 ntBASIC3.69□□□□□ -1.82
RFX4Q33E94 MIR325HG-208ENST00000630388 1043 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
RFX4Q33E94 LRRC9-202ENST00000445360 4717 ntAPPRIS P1 TSL 5 BASIC3.69□□□□□ -1.82
RFX4Q33E94 ADAT2-203ENST00000606514 6651 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
RFX4Q33E94 WNK3-205ENST00000620763 5400 ntTSL 5 BASIC3.69□□□□□ -1.82
RFX4Q33E94 AC053481.2-202ENST00000582394 1500 ntBASIC3.69□□□□□ -1.82
RFX4Q33E94 AC116667.1-201ENST00000604855 2072 ntBASIC3.69□□□□□ -1.82
RFX4Q33E94 RAD17-202ENST00000305138 3164 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
RFX4Q33E94 VIT-206ENST00000457137 1344 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
RFX4Q33E94 AC006504.1-201ENST00000562493 3666 ntBASIC3.68□□□□□ -1.82
RFX4Q33E94 KNTC1-201ENST00000333479 6975 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
RFX4Q33E94 IL23R-202ENST00000395227 1459 ntTSL 3 BASIC3.68□□□□□ -1.82
RFX4Q33E94 GABRG2-213ENST00000639046 3058 ntTSL 5 BASIC3.68□□□□□ -1.82
RFX4Q33E94 ZNF439-201ENST00000304030 2622 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
RFX4Q33E94 HNMT-201ENST00000280096 504 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
RFX4Q33E94 AL589826.1-201ENST00000340697 249 ntBASIC3.68□□□□□ -1.82
RFX4Q33E94 ELOCP19-201ENST00000411919 318 ntBASIC3.68□□□□□ -1.82
RFX4Q33E94 RPL7AP73-201ENST00000413490 353 ntBASIC3.68□□□□□ -1.82
RFX4Q33E94 RPL30P2-201ENST00000414021 291 ntBASIC3.68□□□□□ -1.82
RFX4Q33E94 LINC01048-201ENST00000414480 511 ntTSL 2 BASIC3.68□□□□□ -1.82
RFX4Q33E94 AC092155.1-202ENST00000416111 932 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
RFX4Q33E94 LINC01752-201ENST00000417299 438 ntTSL 2 BASIC3.68□□□□□ -1.82
RFX4Q33E94 RPL7P53-201ENST00000421245 739 ntBASIC3.68□□□□□ -1.82
RFX4Q33E94 RPS27AP7-201ENST00000422792 455 ntBASIC3.68□□□□□ -1.82
RFX4Q33E94 AP000233.1-201ENST00000426609 291 ntTSL 3 BASIC3.68□□□□□ -1.82
RFX4Q33E94 AL358472.1-201ENST00000431295 329 ntBASIC3.68□□□□□ -1.82
RFX4Q33E94 AL513323.1-201ENST00000431862 1063 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
RFX4Q33E94 ZFAND6P1-201ENST00000434138 605 ntBASIC3.68□□□□□ -1.82
RFX4Q33E94 RPS3AP54-201ENST00000435535 734 ntBASIC3.68□□□□□ -1.82
RFX4Q33E94 AP000943.1-201ENST00000438416 712 ntTSL 3 BASIC3.68□□□□□ -1.82
RFX4Q33E94 AC021205.1-201ENST00000468797 348 ntBASIC3.68□□□□□ -1.82
RFX4Q33E94 MME-AS1-201ENST00000484721 828 ntTSL 2 BASIC3.68□□□□□ -1.82
RFX4Q33E94 AC013356.1-201ENST00000489027 564 ntBASIC3.68□□□□□ -1.82
RFX4Q33E94 IGBP1P5-201ENST00000507524 1000 ntBASIC3.68□□□□□ -1.82
RFX4Q33E94 KRT19P6-201ENST00000510983 209 ntBASIC3.68□□□□□ -1.82
RFX4Q33E94 USP9YP5-201ENST00000511770 630 ntBASIC3.68□□□□□ -1.82
RFX4Q33E94 LINC02472-201ENST00000512268 575 ntTSL 2 BASIC3.68□□□□□ -1.82
RFX4Q33E94 EGFLAM-AS2-201ENST00000512603 466 ntTSL 5 BASIC3.68□□□□□ -1.82
RFX4Q33E94 EGFLAM-AS2-202ENST00000514377 539 ntTSL 3 BASIC3.68□□□□□ -1.82
RFX4Q33E94 AC099522.1-202ENST00000514718 367 ntBASIC3.68□□□□□ -1.82
RFX4Q33E94 AC027801.4-201ENST00000518420 395 ntTSL 5 BASIC3.68□□□□□ -1.82
RFX4Q33E94 AC024681.2-201ENST00000523525 204 ntTSL 5 BASIC3.68□□□□□ -1.82
RFX4Q33E94 AC013549.2-201ENST00000526953 489 ntTSL 3 BASIC3.68□□□□□ -1.82
RFX4Q33E94 AC073655.2-202ENST00000547927 401 ntTSL 3 BASIC3.68□□□□□ -1.82
RFX4Q33E94 AC087501.4-201ENST00000574460 235 ntTSL 5 BASIC3.68□□□□□ -1.82
RFX4Q33E94 AC099489.2-201ENST00000574976 260 ntBASIC3.68□□□□□ -1.82
RFX4Q33E94 MIR5684-201ENST00000585074 65 ntBASIC3.68□□□□□ -1.82
RFX4Q33E94 DTNA-232ENST00000599844 853 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
RFX4Q33E94 AL049844.2-201ENST00000604280 628 ntBASIC3.68□□□□□ -1.82
RFX4Q33E94 AL390816.3-201ENST00000604527 1066 ntBASIC3.68□□□□□ -1.82
RFX4Q33E94 AC092683.2-203ENST00000618807 788 ntTSL 5 BASIC3.68□□□□□ -1.82
RFX4Q33E94 AP000346.3-201ENST00000622821 210 ntBASIC3.68□□□□□ -1.82
RFX4Q33E94 KIAA1524-208ENST00000625495 147 ntTSL 5 BASIC3.68□□□□□ -1.82
RFX4Q33E94 ATE1-AS1-202ENST00000636460 506 ntBASIC3.68□□□□□ -1.82
RFX4Q33E94 ZNF107-203ENST00000395391 6094 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
RFX4Q33E94 GTF2H1-204ENST00000524753 1510 ntTSL 3 BASIC3.68□□□□□ -1.82
RFX4Q33E94 MAPK10-372ENST00000641954 3413 ntBASIC3.68□□□□□ -1.82
RFX4Q33E94 GABRA1-220ENST00000638159 4088 ntTSL 5 BASIC3.68□□□□□ -1.82
RFX4Q33E94 ATXN3-207ENST00000503767 1315 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
RFX4Q33E94 CLIC2-202ENST00000369449 2655 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
RFX4Q33E94 OR6P1-202ENST00000641540 3255 ntAPPRIS P1 BASIC3.67□□□□□ -1.82
RFX4Q33E94 CFHR2-201ENST00000367415 1059 ntAPPRIS P2 TSL 1 (best) BASIC3.67□□□□□ -1.82
RFX4Q33E94 TRAV12-2-201ENST00000390437 445 ntAPPRIS P1 BASIC3.67□□□□□ -1.82
RFX4Q33E94 RNU4-25P-201ENST00000410569 230 ntBASIC3.67□□□□□ -1.82
RFX4Q33E94 AC011933.1-201ENST00000413334 321 ntBASIC3.67□□□□□ -1.82
RFX4Q33E94 AC010163.2-201ENST00000416341 381 ntTSL 2 BASIC3.67□□□□□ -1.82
RFX4Q33E94 AC127526.1-201ENST00000417526 366 ntBASIC3.67□□□□□ -1.82
RFX4Q33E94 LINC00502-201ENST00000423621 445 ntTSL 3 BASIC3.67□□□□□ -1.82
RFX4Q33E94 FAM204CP-201ENST00000424489 642 ntBASIC3.67□□□□□ -1.82
RFX4Q33E94 DIAPH3-AS2-201ENST00000428656 367 ntTSL 3 BASIC3.67□□□□□ -1.82
RFX4Q33E94 COX6B1P7-201ENST00000430845 235 ntBASIC3.67□□□□□ -1.82
RFX4Q33E94 AC004837.2-201ENST00000435766 731 ntTSL 3 BASIC3.67□□□□□ -1.82
RFX4Q33E94 AL691517.1-201ENST00000440833 1235 ntBASIC3.67□□□□□ -1.82
RFX4Q33E94 MTCO3P43-201ENST00000440974 771 ntBASIC3.67□□□□□ -1.82
RFX4Q33E94 MTND5P8-201ENST00000449817 1083 ntBASIC3.67□□□□□ -1.82
RFX4Q33E94 AC068707.1-201ENST00000451438 391 ntTSL 3 BASIC3.67□□□□□ -1.82
RFX4Q33E94 LINC01941-201ENST00000455174 624 ntTSL 2 BASIC3.67□□□□□ -1.82
RFX4Q33E94 AC116533.1-201ENST00000459748 321 ntBASIC3.67□□□□□ -1.82
RFX4Q33E94 AC089999.1-201ENST00000460336 374 ntBASIC3.67□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 78.7 ms