Protein–RNA interactions for Protein: Q15475

SIX1, Homeobox protein SIX1, humanhuman

Predicted RBP Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX1Q15475 TET2-204ENST00000413648 4973 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
SIX1Q15475 OR11H4-201ENST00000315409 1082 ntBASIC4.1□□□□□ -1.75
SIX1Q15475 OR6C3-201ENST00000379667 936 ntAPPRIS P1 BASIC4.1□□□□□ -1.75
SIX1Q15475 MIR620-201ENST00000385232 95 ntBASIC4.1□□□□□ -1.75
SIX1Q15475 RNU6-796P-201ENST00000391086 107 ntBASIC4.1□□□□□ -1.75
SIX1Q15475 AC104297.1-201ENST00000393779 870 ntBASIC4.1□□□□□ -1.75
SIX1Q15475 RPS27AP11-201ENST00000402798 447 ntBASIC4.1□□□□□ -1.75
SIX1Q15475 AC097467.3-223ENST00000417474 449 ntTSL 3 BASIC4.1□□□□□ -1.75
SIX1Q15475 MTND2P15-201ENST00000418575 892 ntBASIC4.1□□□□□ -1.75
SIX1Q15475 ANKRD10-IT1-201ENST00000426991 800 ntTSL 2 BASIC4.1□□□□□ -1.75
SIX1Q15475 TBCAP1-201ENST00000436520 327 ntBASIC4.1□□□□□ -1.75
SIX1Q15475 LINC01967-202ENST00000437506 515 ntTSL 5 BASIC4.1□□□□□ -1.75
SIX1Q15475 Z93403.1-202ENST00000440002 713 ntTSL 3 BASIC4.1□□□□□ -1.75
SIX1Q15475 AP000146.1-203ENST00000444178 309 ntTSL 3 BASIC4.1□□□□□ -1.75
SIX1Q15475 AL139275.2-201ENST00000444731 539 ntTSL 3 BASIC4.1□□□□□ -1.75
SIX1Q15475 HMGN1P5-201ENST00000448591 263 ntBASIC4.1□□□□□ -1.75
SIX1Q15475 FGF7P3-201ENST00000454645 303 ntBASIC4.1□□□□□ -1.75
SIX1Q15475 TMEM212-IT1-201ENST00000456146 470 ntTSL 3 BASIC4.1□□□□□ -1.75
SIX1Q15475 AC009495.2-201ENST00000457108 506 ntTSL 2 BASIC4.1□□□□□ -1.75
SIX1Q15475 SETP6-201ENST00000479329 568 ntBASIC4.1□□□□□ -1.75
SIX1Q15475 AC096576.3-201ENST00000505528 721 ntTSL 5 BASIC4.1□□□□□ -1.75
SIX1Q15475 MTCO3P27-201ENST00000514397 196 ntBASIC4.1□□□□□ -1.75
SIX1Q15475 MTATP6P9-201ENST00000515039 680 ntBASIC4.1□□□□□ -1.75
SIX1Q15475 LINC02497-201ENST00000515292 507 ntTSL 3 BASIC4.1□□□□□ -1.75
SIX1Q15475 AC027801.4-201ENST00000518420 395 ntTSL 5 BASIC4.1□□□□□ -1.75
SIX1Q15475 AC087341.1-201ENST00000521490 491 ntTSL 2 BASIC4.1□□□□□ -1.75
SIX1Q15475 AF117829.1-210ENST00000523859 696 ntTSL 3 BASIC4.1□□□□□ -1.75
SIX1Q15475 TOMM20P2-201ENST00000540082 421 ntBASIC4.1□□□□□ -1.75
SIX1Q15475 AC110023.1-201ENST00000554318 457 ntTSL 3 BASIC4.1□□□□□ -1.75
SIX1Q15475 AC090877.1-201ENST00000561418 344 ntBASIC4.1□□□□□ -1.75
SIX1Q15475 LINC2194-201ENST00000567127 454 ntTSL 3 BASIC4.1□□□□□ -1.75
SIX1Q15475 AC090403.1-205ENST00000580883 516 ntTSL 2 BASIC4.1□□□□□ -1.75
SIX1Q15475 AC011458.1-201ENST00000604034 617 ntBASIC4.1□□□□□ -1.75
SIX1Q15475 SUMO2P14-201ENST00000604488 293 ntBASIC4.1□□□□□ -1.75
SIX1Q15475 AL445423.1-201ENST00000609941 536 ntBASIC4.1□□□□□ -1.75
SIX1Q15475 LINC02340-201ENST00000610335 626 ntTSL 3 BASIC4.1□□□□□ -1.75
SIX1Q15475 METTL8-218ENST00000638989 876 ntTSL 5 BASIC4.1□□□□□ -1.75
SIX1Q15475 METTL8-219ENST00000640734 726 ntTSL 2 BASIC4.1□□□□□ -1.75
SIX1Q15475 OR11H4-203ENST00000641525 1082 ntAPPRIS P1 BASIC4.1□□□□□ -1.75
SIX1Q15475 OR1S2-202ENST00000641683 941 ntAPPRIS P1 BASIC4.1□□□□□ -1.75
SIX1Q15475 ATXN3-207ENST00000503767 1315 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
SIX1Q15475 SLC6A15-203ENST00000450363 4229 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
SIX1Q15475 LIPI-204ENST00000614229 1439 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
SIX1Q15475 KCNU1-201ENST00000399881 3695 ntAPPRIS P1 TSL 2 BASIC4.1□□□□□ -1.75
SIX1Q15475 HSPA8P19-201ENST00000505359 1517 ntBASIC4.1□□□□□ -1.75
SIX1Q15475 PUS7L-207ENST00000551923 3313 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
SIX1Q15475 RFX7-201ENST00000559447 10426 ntAPPRIS P5 TSL 5 BASIC4.09□□□□□ -1.75
SIX1Q15475 NCAPGP1-201ENST00000505112 1814 ntBASIC4.09□□□□□ -1.75
SIX1Q15475 NEDD4-201ENST00000338963 7019 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
SIX1Q15475 PHF20L1-210ENST00000395390 5900 ntTSL 5 BASIC4.09□□□□□ -1.75
SIX1Q15475 MIR383-201ENST00000362257 73 ntBASIC4.09□□□□□ -1.75
SIX1Q15475 ATP5F1P4-201ENST00000397288 746 ntBASIC4.09□□□□□ -1.75
SIX1Q15475 RPL5P19-201ENST00000404228 893 ntBASIC4.09□□□□□ -1.75
SIX1Q15475 HYKK-202ENST00000408962 847 ntTSL 5 BASIC4.09□□□□□ -1.75
SIX1Q15475 AC069282.1-201ENST00000411911 526 ntBASIC4.09□□□□□ -1.75
SIX1Q15475 XKRYP4-201ENST00000414395 483 ntBASIC4.09□□□□□ -1.75
SIX1Q15475 AL158825.1-201ENST00000414735 521 ntBASIC4.09□□□□□ -1.75
SIX1Q15475 DAB1-AS1-201ENST00000416598 1262 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
SIX1Q15475 AL139824.1-201ENST00000431983 453 ntTSL 3 BASIC4.09□□□□□ -1.75
SIX1Q15475 HMGB1P16-201ENST00000447155 540 ntBASIC4.09□□□□□ -1.75
SIX1Q15475 XKRYP5-201ENST00000449659 483 ntBASIC4.09□□□□□ -1.75
SIX1Q15475 RPL7P55-201ENST00000450522 746 ntBASIC4.09□□□□□ -1.75
SIX1Q15475 FCF1P6-201ENST00000456841 595 ntBASIC4.09□□□□□ -1.75
SIX1Q15475 HSPE1P22-201ENST00000456856 327 ntBASIC4.09□□□□□ -1.75
SIX1Q15475 RPL38P1-201ENST00000460914 211 ntBASIC4.09□□□□□ -1.75
SIX1Q15475 ALDH7A1P3-201ENST00000492517 345 ntBASIC4.09□□□□□ -1.75
SIX1Q15475 LINC02017-201ENST00000496829 474 ntTSL 3 BASIC4.09□□□□□ -1.75
SIX1Q15475 LNCPRESS2-201ENST00000502518 616 ntTSL 5 BASIC4.09□□□□□ -1.75
SIX1Q15475 AC025459.1-201ENST00000504072 156 ntBASIC4.09□□□□□ -1.75
SIX1Q15475 AC119751.4-201ENST00000507498 357 ntBASIC4.09□□□□□ -1.75
SIX1Q15475 AC112518.2-201ENST00000508565 425 ntBASIC4.09□□□□□ -1.75
SIX1Q15475 HMGB3P13-201ENST00000511263 607 ntBASIC4.09□□□□□ -1.75
SIX1Q15475 CD69-203ENST00000536709 1020 ntTSL 2 BASIC4.09□□□□□ -1.75
SIX1Q15475 AC068768.1-204ENST00000544890 796 ntTSL 4 BASIC4.09□□□□□ -1.75
SIX1Q15475 AC087897.2-201ENST00000552639 678 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
SIX1Q15475 AC104229.1-201ENST00000561364 255 ntBASIC4.09□□□□□ -1.75
SIX1Q15475 HYKK-203ENST00000563233 734 ntTSL 2 BASIC4.09□□□□□ -1.75
SIX1Q15475 AC141257.3-201ENST00000572906 215 ntBASIC4.09□□□□□ -1.75
SIX1Q15475 AC005899.4-201ENST00000581915 514 ntTSL 4 BASIC4.09□□□□□ -1.75
SIX1Q15475 LINC02079-201ENST00000582518 294 ntTSL 2 BASIC4.09□□□□□ -1.75
SIX1Q15475 AP003117.1-201ENST00000602771 554 ntBASIC4.09□□□□□ -1.75
SIX1Q15475 AL391834.2-201ENST00000609982 546 ntBASIC4.09□□□□□ -1.75
SIX1Q15475 AC005156.1-201ENST00000613371 573 ntBASIC4.09□□□□□ -1.75
SIX1Q15475 AL034549.1-201ENST00000615120 578 ntTSL 2 BASIC4.09□□□□□ -1.75
SIX1Q15475 MIR8059-201ENST00000620427 81 ntBASIC4.09□□□□□ -1.75
SIX1Q15475 AL161616.2-201ENST00000622001 565 ntTSL 4 BASIC4.09□□□□□ -1.75
SIX1Q15475 CNGA1-201ENST00000358519 2627 ntAPPRIS P3 TSL 1 (best) BASIC4.09□□□□□ -1.75
SIX1Q15475 LINC02456-201ENST00000635615 1323 ntTSL 5 BASIC4.09□□□□□ -1.75
SIX1Q15475 LINC00561-201ENST00000565815 2738 ntBASIC4.09□□□□□ -1.75
SIX1Q15475 KLRD1-204ENST00000381908 15549 ntAPPRIS P4 TSL 1 (best) BASIC4.09□□□□□ -1.75
SIX1Q15475 USP9YP4-201ENST00000424401 1745 ntBASIC4.09□□□□□ -1.76
SIX1Q15475 API5-210ENST00000534600 1760 ntTSL 5 BASIC4.09□□□□□ -1.76
SIX1Q15475 NCOA1-201ENST00000288599 6952 ntAPPRIS ALT2 TSL 1 (best) BASIC4.09□□□□□ -1.76
SIX1Q15475 LINC02471-203ENST00000641941 4752 ntBASIC4.09□□□□□ -1.76
SIX1Q15475 TUG1-201ENST00000519077 5673 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
SIX1Q15475 OR8G1-201ENST00000341493 936 ntAPPRIS P1 BASIC4.08□□□□□ -1.76
SIX1Q15475 C4orf47-201ENST00000378850 1134 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
SIX1Q15475 RAD17-208ENST00000380774 2117 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
SIX1Q15475 TRGV8-201ENST00000390343 468 ntAPPRIS P1 BASIC4.08□□□□□ -1.76
SIX1Q15475 FOXP2-205ENST00000393489 2285 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 87.3 ms