Protein–RNA interactions for Protein: Q12946

FOXF1, Forkhead box protein F1, humanhuman

Predictions only

Length 379 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXF1Q12946 AP000146.1-203ENST00000444178 309 ntTSL 3 BASIC3.35□□□□□ -1.87
FOXF1Q12946 AC005358.1-201ENST00000445508 1143 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
FOXF1Q12946 HSPE1P22-201ENST00000456856 327 ntBASIC3.35□□□□□ -1.87
FOXF1Q12946 AL034349.1-201ENST00000458367 549 ntTSL 5 BASIC3.35□□□□□ -1.87
FOXF1Q12946 ANK3-207ENST00000460468 677 ntTSL 3 BASIC3.35□□□□□ -1.87
FOXF1Q12946 AC078828.1-201ENST00000471993 458 ntTSL 3 BASIC3.35□□□□□ -1.87
FOXF1Q12946 UBE2CP3-201ENST00000502715 450 ntBASIC3.35□□□□□ -1.87
FOXF1Q12946 AC005798.1-201ENST00000513715 387 ntBASIC3.35□□□□□ -1.87
FOXF1Q12946 MTHFD2P4-201ENST00000515074 1025 ntBASIC3.35□□□□□ -1.87
FOXF1Q12946 NARSP2-201ENST00000518524 679 ntBASIC3.35□□□□□ -1.87
FOXF1Q12946 CARD8-211ENST00000519332 500 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
FOXF1Q12946 AC087672.2-201ENST00000522498 429 ntTSL 2 BASIC3.35□□□□□ -1.87
FOXF1Q12946 AC090819.1-201ENST00000523800 1111 ntBASIC3.35□□□□□ -1.87
FOXF1Q12946 PAFAH1B2-206ENST00000530272 850 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
FOXF1Q12946 CLEC7A-212ENST00000533022 625 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
FOXF1Q12946 FAXC-204ENST00000538471 941 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
FOXF1Q12946 AF111169.4-202ENST00000553507 262 ntTSL 3 BASIC3.35□□□□□ -1.87
FOXF1Q12946 AL133457.1-201ENST00000564251 987 ntBASIC3.35□□□□□ -1.87
FOXF1Q12946 MIR4644-201ENST00000579929 84 ntBASIC3.35□□□□□ -1.87
FOXF1Q12946 SNORD39.2-201ENST00000579995 76 ntBASIC3.35□□□□□ -1.87
FOXF1Q12946 MSMB-201ENST00000581478 386 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
FOXF1Q12946 AP001542.3-201ENST00000587619 527 ntTSL 5 BASIC3.35□□□□□ -1.87
FOXF1Q12946 AC093227.2-201ENST00000589357 285 ntBASIC3.35□□□□□ -1.87
FOXF1Q12946 AC244505.7-201ENST00000599675 272 ntBASIC3.35□□□□□ -1.87
FOXF1Q12946 AL109618.2-201ENST00000605527 211 ntBASIC3.35□□□□□ -1.87
FOXF1Q12946 U7.8-201ENST00000619968 63 ntBASIC3.35□□□□□ -1.87
FOXF1Q12946 NLGN1-201ENST00000361589 5092 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
FOXF1Q12946 FMNL2-202ENST00000475377 3648 ntTSL 5 BASIC3.35□□□□□ -1.87
FOXF1Q12946 GTDC1-206ENST00000409214 2954 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
FOXF1Q12946 SEC31A-215ENST00000505472 4159 ntTSL 5 BASIC3.35□□□□□ -1.87
FOXF1Q12946 TNFAIP6-201ENST00000243347 1424 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
FOXF1Q12946 CYP1D1P-201ENST00000416662 1433 ntBASIC3.35□□□□□ -1.87
FOXF1Q12946 CASC19-284ENST00000642142 1868 ntBASIC3.35□□□□□ -1.87
FOXF1Q12946 LINC02532-209ENST00000602934 2464 ntTSL 2 BASIC3.34□□□□□ -1.87
FOXF1Q12946 GABRA2-202ENST00000381620 2525 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
FOXF1Q12946 ENPP3-202ENST00000358229 3026 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
FOXF1Q12946 SCEL-202ENST00000377246 3081 ntAPPRIS ALT2 TSL 1 (best) BASIC3.34□□□□□ -1.87
FOXF1Q12946 CD36-221ENST00000534394 1741 ntTSL 2 BASIC3.34□□□□□ -1.87
FOXF1Q12946 RPS6KA6-204ENST00000620340 8169 ntTSL 5 BASIC3.34□□□□□ -1.87
FOXF1Q12946 FKTN-201ENST00000223528 7364 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
FOXF1Q12946 RNA5SP124-201ENST00000362739 110 ntBASIC3.34□□□□□ -1.87
FOXF1Q12946 AL158212.2-201ENST00000369391 460 ntTSL 3 BASIC3.34□□□□□ -1.87
FOXF1Q12946 TCEAL7-202ENST00000372666 852 ntAPPRIS P1 TSL 2 BASIC3.34□□□□□ -1.87
FOXF1Q12946 TRPM3-206ENST00000377097 554 ntTSL 2 BASIC3.34□□□□□ -1.87
FOXF1Q12946 SNORD3H-201ENST00000384486 214 ntBASIC3.34□□□□□ -1.87
FOXF1Q12946 MIR554-201ENST00000384874 96 ntBASIC3.34□□□□□ -1.87
FOXF1Q12946 AC098592.2-201ENST00000413158 265 ntBASIC3.34□□□□□ -1.87
FOXF1Q12946 AC062031.1-201ENST00000414967 747 ntTSL 3 BASIC3.34□□□□□ -1.87
FOXF1Q12946 VN1R31P-201ENST00000417498 730 ntBASIC3.34□□□□□ -1.87
FOXF1Q12946 AC244033.1-201ENST00000426826 870 ntBASIC3.34□□□□□ -1.87
FOXF1Q12946 AC090617.2-201ENST00000433167 404 ntTSL 3 BASIC3.34□□□□□ -1.87
FOXF1Q12946 AL035246.1-201ENST00000433554 1255 ntBASIC3.34□□□□□ -1.87
FOXF1Q12946 RRM2P4-201ENST00000441721 562 ntBASIC3.34□□□□□ -1.87
FOXF1Q12946 VN1R96P-201ENST00000446052 858 ntBASIC3.34□□□□□ -1.87
FOXF1Q12946 AC099563.1-201ENST00000456086 418 ntBASIC3.34□□□□□ -1.87
FOXF1Q12946 LINC01312-202ENST00000456347 813 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
FOXF1Q12946 RN7SL93P-201ENST00000463035 293 ntBASIC3.34□□□□□ -1.87
FOXF1Q12946 LINC00971-203ENST00000491849 452 ntTSL 3 BASIC3.34□□□□□ -1.87
FOXF1Q12946 SNORA26.10-201ENST00000516427 141 ntBASIC3.34□□□□□ -1.87
FOXF1Q12946 AP001207.3-201ENST00000520268 491 ntTSL 3 BASIC3.34□□□□□ -1.87
FOXF1Q12946 AF181450.1-201ENST00000522980 410 ntTSL 3 BASIC3.34□□□□□ -1.87
FOXF1Q12946 AP001267.3-202ENST00000525992 448 ntTSL 3 BASIC3.34□□□□□ -1.87
FOXF1Q12946 AL356215.1-201ENST00000528366 1102 ntTSL 2 BASIC3.34□□□□□ -1.87
FOXF1Q12946 AP002989.1-201ENST00000533459 562 ntTSL 4 BASIC3.34□□□□□ -1.87
FOXF1Q12946 RFPL1S-203ENST00000539579 330 ntBASIC3.34□□□□□ -1.87
FOXF1Q12946 NDUFB1-204ENST00000555441 458 ntAPPRIS P1 TSL 3 BASIC3.34□□□□□ -1.87
FOXF1Q12946 TRAV15-201ENST00000556680 249 ntBASIC3.34□□□□□ -1.87
FOXF1Q12946 AC090125.1-201ENST00000581541 493 ntTSL 3 BASIC3.34□□□□□ -1.87
FOXF1Q12946 AL049634.3-201ENST00000604968 457 ntBASIC3.34□□□□□ -1.87
FOXF1Q12946 RNU1-30P-201ENST00000606575 163 ntBASIC3.34□□□□□ -1.87
FOXF1Q12946 AL391497.1-201ENST00000608671 547 ntBASIC3.34□□□□□ -1.87
FOXF1Q12946 AC004825.2-201ENST00000616634 455 ntBASIC3.34□□□□□ -1.87
FOXF1Q12946 LINC01002-206ENST00000631772 539 ntTSL 4 BASIC3.34□□□□□ -1.87
FOXF1Q12946 MIR6715B-201ENST00000637172 77 ntBASIC3.34□□□□□ -1.87
FOXF1Q12946 FILIP1L-209ENST00000487087 2321 ntTSL 5 BASIC3.34□□□□□ -1.87
FOXF1Q12946 RNF38-203ENST00000353739 4945 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
FOXF1Q12946 CFAP44-202ENST00000393845 7069 ntAPPRIS ALT2 TSL 5 BASIC3.34□□□□□ -1.87
FOXF1Q12946 MLF1-208ENST00000478894 1372 ntTSL 2 BASIC3.34□□□□□ -1.88
FOXF1Q12946 NPSR1-AS1-205ENST00000436945 1406 ntTSL 1 (best) BASIC3.34□□□□□ -1.88
FOXF1Q12946 AJ009632.2-202ENST00000634644 1513 ntTSL 5 BASIC3.34□□□□□ -1.88
FOXF1Q12946 ADAM7-202ENST00000380789 3358 ntAPPRIS ALT2 TSL 5 BASIC3.34□□□□□ -1.88
FOXF1Q12946 NAIP-205ENST00000508426 4153 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
FOXF1Q12946 CENPJ-205ENST00000545981 4299 ntTSL 2 BASIC3.33□□□□□ -1.88
FOXF1Q12946 MUC19-205ENST00000454784 24775 ntTSL 5 BASIC3.33□□□□□ -1.88
FOXF1Q12946 RNF17-201ENST00000255324 5119 ntAPPRIS P1 TSL 2 BASIC3.33□□□□□ -1.88
FOXF1Q12946 ZNF682-207ENST00000595736 1710 ntTSL 2 BASIC3.33□□□□□ -1.88
FOXF1Q12946 PCDH15-203ENST00000373955 4230 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
FOXF1Q12946 MSTN-201ENST00000260950 2822 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
FOXF1Q12946 SLITRK5-201ENST00000325089 21103 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
FOXF1Q12946 RNU1-18P-201ENST00000363062 164 ntBASIC3.33□□□□□ -1.88
FOXF1Q12946 NCSTNP1-201ENST00000406229 144 ntBASIC3.33□□□□□ -1.88
FOXF1Q12946 RNU6ATAC-201ENST00000408749 126 ntBASIC3.33□□□□□ -1.88
FOXF1Q12946 LINC01349-201ENST00000416343 497 ntTSL 3 BASIC3.33□□□□□ -1.88
FOXF1Q12946 AC096644.3-201ENST00000416788 338 ntBASIC3.33□□□□□ -1.88
FOXF1Q12946 RPL36AP36-201ENST00000418616 301 ntBASIC3.33□□□□□ -1.88
FOXF1Q12946 AL645931.1-201ENST00000439737 410 ntBASIC3.33□□□□□ -1.88
FOXF1Q12946 AC009263.1-201ENST00000441193 1239 ntBASIC3.33□□□□□ -1.88
FOXF1Q12946 AC060834.2-201ENST00000447999 618 ntTSL 3 BASIC3.33□□□□□ -1.88
FOXF1Q12946 AL359073.1-201ENST00000448036 403 ntBASIC3.33□□□□□ -1.88
FOXF1Q12946 AL672167.3-201ENST00000465951 960 ntBASIC3.33□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 117.2 ms