Protein–RNA interactions for Protein: P78527

PRKDC, DNA-dependent protein kinase catalytic subunit, humanhuman

Known RBP Predictions only

Length 4,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDCP78527 LINC00845-201ENST00000417931 696 ntTSL 2 BASIC2.53□□□□□ -2
PRKDCP78527 AL139002.1-201ENST00000435281 902 ntTSL 5 BASIC2.53□□□□□ -2
PRKDCP78527 AC013762.1-201ENST00000531136 467 ntTSL 3 BASIC2.53□□□□□ -2
PRKDCP78527 AC006116.8-203ENST00000587448 465 ntTSL 3 BASIC2.53□□□□□ -2
PRKDCP78527 AGL-201ENST00000294724 7446 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
PRKDCP78527 ZFP14-201ENST00000270001 7489 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
PRKDCP78527 PWRN2-202ENST00000567246 4295 ntTSL 1 (best) BASIC2.53□□□□□ -2.01
PRKDCP78527 PTPRT-202ENST00000373184 12483 ntAPPRIS ALT2 TSL 5 BASIC2.53□□□□□ -2.01
PRKDCP78527 KIAA0586-214ENST00000619416 8233 ntAPPRIS ALT2 TSL 1 (best) BASIC2.53□□□□□ -2.01
PRKDCP78527 OR4F6-201ENST00000328882 1238 ntAPPRIS P1 BASIC2.53□□□□□ -2.01
PRKDCP78527 MFAP3L-206ENST00000506110 548 ntTSL 3 BASIC2.53□□□□□ -2.01
PRKDCP78527 PWRN1-209ENST00000568019 359 ntTSL 3 BASIC2.53□□□□□ -2.01
PRKDCP78527 AC008759.1-201ENST00000589783 983 ntBASIC2.53□□□□□ -2.01
PRKDCP78527 ATM-230ENST00000640388 578 ntTSL 5 BASIC2.53□□□□□ -2.01
PRKDCP78527 DOCK10-202ENST00000409592 7288 ntAPPRIS ALT2 TSL 1 (best) BASIC2.52□□□□□ -2.01
PRKDCP78527 SLC15A5-201ENST00000344941 2923 ntAPPRIS P1 TSL 5 BASIC2.52□□□□□ -2.01
PRKDCP78527 ATMIN-204ENST00000564241 4803 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
PRKDCP78527 ABCA5-208ENST00000588877 6525 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
PRKDCP78527 AC010300.1-201ENST00000600671 5134 ntBASIC2.52□□□□□ -2.01
PRKDCP78527 PCLO-201ENST00000333891 20329 ntAPPRIS P1 TSL 2 BASIC2.52□□□□□ -2.01
PRKDCP78527 OR5AU1-202ENST00000641039 8232 ntAPPRIS P1 BASIC2.52□□□□□ -2.01
PRKDCP78527 ADGRL2-209ENST00000370727 5164 ntTSL 5 BASIC2.52□□□□□ -2.01
PRKDCP78527 TRPM3-209ENST00000377110 12258 ntAPPRIS ALT1 TSL 1 (best) BASIC2.52□□□□□ -2.01
PRKDCP78527 C1orf105-201ENST00000367725 888 ntTSL 2 BASIC2.52□□□□□ -2.01
PRKDCP78527 RNA5SP424-201ENST00000390988 115 ntBASIC2.52□□□□□ -2.01
PRKDCP78527 OR51A6P-201ENST00000418680 1004 ntBASIC2.52□□□□□ -2.01
PRKDCP78527 AC005189.1-201ENST00000431286 310 ntBASIC2.52□□□□□ -2.01
PRKDCP78527 AC006028.1-201ENST00000438379 402 ntBASIC2.52□□□□□ -2.01
PRKDCP78527 AC099563.1-201ENST00000456086 418 ntBASIC2.52□□□□□ -2.01
PRKDCP78527 CLCA3P-202ENST00000466454 3412 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
PRKDCP78527 NECTIN3-AS1-202ENST00000467426 664 ntTSL 3 BASIC2.52□□□□□ -2.01
PRKDCP78527 LINC00901-201ENST00000487512 1452 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
PRKDCP78527 MDM4-213ENST00000507825 481 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
PRKDCP78527 AC138938.1-201ENST00000515431 782 ntBASIC2.52□□□□□ -2.01
PRKDCP78527 OR4C2P-201ENST00000530855 1064 ntBASIC2.52□□□□□ -2.01
PRKDCP78527 AP001318.2-201ENST00000533378 492 ntTSL 3 BASIC2.52□□□□□ -2.01
PRKDCP78527 PUS7L-207ENST00000551923 3313 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
PRKDCP78527 AC005899.4-201ENST00000581915 514 ntTSL 4 BASIC2.52□□□□□ -2.01
PRKDCP78527 AC241585.2-209ENST00000638217 143 ntBASIC2.52□□□□□ -2.01
PRKDCP78527 GHR-207ENST00000537449 4419 ntAPPRIS P1 TSL 5 BASIC2.52□□□□□ -2.01
PRKDCP78527 SORT1-209ENST00000538502 6993 ntTSL 2 BASIC2.52□□□□□ -2.01
PRKDCP78527 TMEM67-202ENST00000409623 3255 ntTSL 2 BASIC2.52□□□□□ -2.01
PRKDCP78527 CPS1-204ENST00000451903 4770 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
PRKDCP78527 AC093849.1-201ENST00000563631 2209 ntBASIC2.52□□□□□ -2.01
PRKDCP78527 SDHC-202ENST00000367975 13566 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
PRKDCP78527 AC007685.1-201ENST00000329806 452 ntBASIC2.52□□□□□ -2.01
PRKDCP78527 OR5K4-201ENST00000354924 966 ntAPPRIS P1 BASIC2.52□□□□□ -2.01
PRKDCP78527 AC063979.1-201ENST00000415539 377 ntBASIC2.52□□□□□ -2.01
PRKDCP78527 AL021026.1-201ENST00000422841 658 ntTSL 3 BASIC2.52□□□□□ -2.01
PRKDCP78527 AL035407.1-201ENST00000429211 571 ntBASIC2.52□□□□□ -2.01
PRKDCP78527 GABRG3-AS1-201ENST00000439938 970 ntTSL 2 BASIC2.52□□□□□ -2.01
PRKDCP78527 AC096554.1-201ENST00000458182 529 ntTSL 5 BASIC2.52□□□□□ -2.01
PRKDCP78527 AC005699.1-205ENST00000510639 427 ntTSL 2 BASIC2.52□□□□□ -2.01
PRKDCP78527 AC127024.3-201ENST00000582841 460 ntTSL 3 BASIC2.52□□□□□ -2.01
PRKDCP78527 MKKS-203ENST00000609375 882 ntTSL 2 BASIC2.52□□□□□ -2.01
PRKDCP78527 AC105227.2-201ENST00000615075 605 ntBASIC2.52□□□□□ -2.01
PRKDCP78527 SMCR2_2.1-201ENST00000619783 161 ntBASIC2.52□□□□□ -2.01
PRKDCP78527 AC018692.3-201ENST00000623929 123 ntBASIC2.52□□□□□ -2.01
PRKDCP78527 EPHA3-202ENST00000452448 2546 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
PRKDCP78527 BAZ2B-202ENST00000343439 2364 ntTSL 5 BASIC2.52□□□□□ -2.01
PRKDCP78527 ZNF780A-205ENST00000594395 2044 ntAPPRIS ALT2 TSL 2 BASIC2.52□□□□□ -2.01
PRKDCP78527 GON4L-203ENST00000368331 7823 ntAPPRIS ALT2 TSL 1 (best) BASIC2.52□□□□□ -2.01
PRKDCP78527 LINC01043-201ENST00000565936 6897 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
PRKDCP78527 OCLN-205ENST00000538151 5391 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
PRKDCP78527 NAV3-201ENST00000397909 9821 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
PRKDCP78527 OR52I2-203ENST00000641896 6591 ntAPPRIS ALT2 BASIC2.52□□□□□ -2.01
PRKDCP78527 RNU1-70P-201ENST00000362618 164 ntBASIC2.52□□□□□ -2.01
PRKDCP78527 SNRPCP3-201ENST00000474888 476 ntBASIC2.52□□□□□ -2.01
PRKDCP78527 AC005828.3-201ENST00000583552 591 ntTSL 5 BASIC2.52□□□□□ -2.01
PRKDCP78527 PARD3B-214ENST00000622699 7442 ntTSL 5 BASIC2.52□□□□□ -2.01
PRKDCP78527 KCNMB2-210ENST00000617329 2214 ntTSL 2 BASIC2.52□□□□□ -2.01
PRKDCP78527 PPFIA2-201ENST00000333447 5517 ntTSL 5 BASIC2.52□□□□□ -2.01
PRKDCP78527 RAPGEF2-201ENST00000264431 6949 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
PRKDCP78527 DPCR1-202ENST00000462446 5314 ntAPPRIS P2 TSL 5 BASIC2.51□□□□□ -2.01
PRKDCP78527 NF1-202ENST00000358273 12425 ntAPPRIS ALT1 TSL 1 (best) BASIC2.51□□□□□ -2.01
PRKDCP78527 MUC12-206ENST00000536621 16321 ntAPPRIS P2 TSL 5 BASIC2.51□□□□□ -2.01
PRKDCP78527 AL589946.1-201ENST00000421465 420 ntTSL 3 BASIC2.51□□□□□ -2.01
PRKDCP78527 AC008154.1-201ENST00000453087 327 ntTSL 3 BASIC2.51□□□□□ -2.01
PRKDCP78527 LINC00456-201ENST00000453862 692 ntTSL 3 BASIC2.51□□□□□ -2.01
PRKDCP78527 FSBP-201ENST00000481490 1158 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
PRKDCP78527 AC069360.1-201ENST00000503469 431 ntTSL 2 BASIC2.51□□□□□ -2.01
PRKDCP78527 AC006363.1-201ENST00000603806 463 ntBASIC2.51□□□□□ -2.01
PRKDCP78527 AL354760.1-201ENST00000608357 643 ntBASIC2.51□□□□□ -2.01
PRKDCP78527 AC084816.1-212ENST00000625240 1114 ntTSL 5 BASIC2.51□□□□□ -2.01
PRKDCP78527 CHRM3-AS2-209ENST00000628573 766 ntTSL 5 BASIC2.51□□□□□ -2.01
PRKDCP78527 AC007750.1-202ENST00000418968 4098 ntTSL 5 BASIC2.51□□□□□ -2.01
PRKDCP78527 LINC02120-201ENST00000505518 2008 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
PRKDCP78527 FBXO8-205ENST00000615392 1591 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
PRKDCP78527 G3BP1-202ENST00000394123 10240 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
PRKDCP78527 PHLDB2-201ENST00000393923 5673 ntTSL 2 BASIC2.51□□□□□ -2.01
PRKDCP78527 DCX-203ENST00000371993 9231 ntAPPRIS ALT1 TSL 5 BASIC2.51□□□□□ -2.01
PRKDCP78527 TIGD2-201ENST00000317005 2083 ntAPPRIS P1 BASIC2.51□□□□□ -2.01
PRKDCP78527 NR3C1-212ENST00000504572 3389 ntAPPRIS ALT1 TSL 1 (best) BASIC2.51□□□□□ -2.01
PRKDCP78527 ATP7A-202ENST00000343533 8289 ntTSL 5 BASIC2.51□□□□□ -2.01
PRKDCP78527 CNTN6-201ENST00000350110 3814 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
PRKDCP78527 MIR887-201ENST00000401258 79 ntBASIC2.51□□□□□ -2.01
PRKDCP78527 AL357075.1-201ENST00000404107 726 ntBASIC2.51□□□□□ -2.01
PRKDCP78527 AL513477.1-202ENST00000417061 214 ntBASIC2.51□□□□□ -2.01
PRKDCP78527 PRKG1-AS1-202ENST00000426785 1111 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
PRKDCP78527 AL139132.1-201ENST00000431587 344 ntBASIC2.51□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 143.8 ms