Protein–RNA interactions for Protein: P67936

TPM4, Tropomyosin alpha-4 chain, humanhuman

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4P67936 NBPF20-201ENST00000369373 18760 ntAPPRIS ALT2 TSL 5 BASIC4.19□□□□□ -1.74
TPM4P67936 DCUN1D1-201ENST00000292782 7954 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
TPM4P67936 LPAR4-201ENST00000435339 2611 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
TPM4P67936 MFN1-201ENST00000263969 2754 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
TPM4P67936 UBE2D2-201ENST00000253815 444 ntAPPRIS ALT1 TSL 5 BASIC4.19□□□□□ -1.74
TPM4P67936 DPPA3-201ENST00000345088 1079 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
TPM4P67936 RNU6-673P-201ENST00000365084 104 ntBASIC4.19□□□□□ -1.74
TPM4P67936 POLR1D-202ENST00000399696 668 ntAPPRIS ALT1 TSL 5 BASIC4.19□□□□□ -1.74
TPM4P67936 RNU4-6P-201ENST00000410804 122 ntBASIC4.19□□□□□ -1.74
TPM4P67936 HMGB3P20-201ENST00000417997 600 ntBASIC4.19□□□□□ -1.74
TPM4P67936 LINC01773-201ENST00000437598 787 ntTSL 2 BASIC4.19□□□□□ -1.74
TPM4P67936 ANP32BP2-201ENST00000454525 545 ntBASIC4.19□□□□□ -1.74
TPM4P67936 AC010468.1-201ENST00000461022 817 ntBASIC4.19□□□□□ -1.74
TPM4P67936 AC105137.1-201ENST00000484355 562 ntBASIC4.19□□□□□ -1.74
TPM4P67936 AC025674.1-201ENST00000507074 324 ntBASIC4.19□□□□□ -1.74
TPM4P67936 RAC1P2-201ENST00000511164 579 ntBASIC4.19□□□□□ -1.74
TPM4P67936 RN7SKP60-201ENST00000516985 239 ntBASIC4.19□□□□□ -1.74
TPM4P67936 TBCA-203ENST00000517679 545 ntTSL 3 BASIC4.19□□□□□ -1.74
TPM4P67936 AC068992.1-201ENST00000521411 543 ntTSL 5 BASIC4.19□□□□□ -1.74
TPM4P67936 AC092326.1-201ENST00000567465 674 ntTSL 3 BASIC4.19□□□□□ -1.74
TPM4P67936 AC009019.1-202ENST00000568410 405 ntTSL 3 BASIC4.19□□□□□ -1.74
TPM4P67936 AP005901.4-201ENST00000577336 569 ntBASIC4.19□□□□□ -1.74
TPM4P67936 AC003687.1-201ENST00000578040 427 ntTSL 3 BASIC4.19□□□□□ -1.74
TPM4P67936 MIR4738-201ENST00000579134 87 ntBASIC4.19□□□□□ -1.74
TPM4P67936 AC103987.2-201ENST00000583436 417 ntTSL 2 BASIC4.19□□□□□ -1.74
TPM4P67936 AC021517.1-203ENST00000590257 421 ntTSL 3 BASIC4.19□□□□□ -1.74
TPM4P67936 PNISR-201ENST00000369239 5112 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
TPM4P67936 DOCK7-201ENST00000251157 7084 ntAPPRIS ALT2 TSL 5 BASIC4.19□□□□□ -1.74
TPM4P67936 ZNF345-213ENST00000589046 3120 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
TPM4P67936 ZNF85-201ENST00000300540 1531 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
TPM4P67936 AC007685.1-201ENST00000329806 452 ntBASIC4.18□□□□□ -1.74
TPM4P67936 RNU6-283P-201ENST00000364788 107 ntBASIC4.18□□□□□ -1.74
TPM4P67936 CFHR2-201ENST00000367415 1059 ntAPPRIS P2 TSL 1 (best) BASIC4.18□□□□□ -1.74
TPM4P67936 RNA5SP424-201ENST00000390988 115 ntBASIC4.18□□□□□ -1.74
TPM4P67936 AMZ2P2-201ENST00000406819 1057 ntBASIC4.18□□□□□ -1.74
TPM4P67936 RPL31P12-201ENST00000422587 358 ntBASIC4.18□□□□□ -1.74
TPM4P67936 AL732292.1-201ENST00000426692 226 ntBASIC4.18□□□□□ -1.74
TPM4P67936 MRPS18BP2-201ENST00000434310 759 ntBASIC4.18□□□□□ -1.74
TPM4P67936 TRAPPC2P9-201ENST00000434556 343 ntBASIC4.18□□□□□ -1.74
TPM4P67936 HMGB3P8-201ENST00000449709 577 ntBASIC4.18□□□□□ -1.74
TPM4P67936 AL034349.1-201ENST00000458367 549 ntTSL 5 BASIC4.18□□□□□ -1.74
TPM4P67936 CFHR2-203ENST00000476712 1020 ntAPPRIS ALT2 TSL 3 BASIC4.18□□□□□ -1.74
TPM4P67936 LINC00903-201ENST00000497854 223 ntTSL 3 BASIC4.18□□□□□ -1.74
TPM4P67936 AC106806.2-201ENST00000509365 500 ntBASIC4.18□□□□□ -1.74
TPM4P67936 AC016550.2-202ENST00000511940 581 ntTSL 2 BASIC4.18□□□□□ -1.74
TPM4P67936 AF117829.1-202ENST00000524166 836 ntTSL 3 BASIC4.18□□□□□ -1.74
TPM4P67936 AC073172.2-201ENST00000527770 571 ntTSL 4 BASIC4.18□□□□□ -1.74
TPM4P67936 AC079089.1-202ENST00000528800 1256 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
TPM4P67936 OR5AP1P-201ENST00000529730 940 ntBASIC4.18□□□□□ -1.74
TPM4P67936 AL139174.1-201ENST00000531489 886 ntBASIC4.18□□□□□ -1.74
TPM4P67936 TOMM20P2-201ENST00000540082 421 ntBASIC4.18□□□□□ -1.74
TPM4P67936 AL161713.1-201ENST00000555538 145 ntBASIC4.18□□□□□ -1.74
TPM4P67936 DISC1FP1-201ENST00000561596 545 ntTSL 5 BASIC4.18□□□□□ -1.74
TPM4P67936 MIR5047-201ENST00000579212 100 ntBASIC4.18□□□□□ -1.74
TPM4P67936 LINC01028-202ENST00000588782 458 ntTSL 3 BASIC4.18□□□□□ -1.74
TPM4P67936 Mico1.1-201ENST00000611698 204 ntBASIC4.18□□□□□ -1.74
TPM4P67936 AC073530.2-201ENST00000623987 261 ntBASIC4.18□□□□□ -1.74
TPM4P67936 LGI1-209ENST00000627699 664 ntTSL 3 BASIC4.18□□□□□ -1.74
TPM4P67936 AF001550.2-201ENST00000636643 217 ntBASIC4.18□□□□□ -1.74
TPM4P67936 ARAP2-210ENST00000618163 2592 ntTSL 5 BASIC4.18□□□□□ -1.74
TPM4P67936 FMNL2-202ENST00000475377 3648 ntTSL 5 BASIC4.18□□□□□ -1.74
TPM4P67936 FAM81B-201ENST00000283357 1560 ntAPPRIS P2 TSL 1 (best) BASIC4.18□□□□□ -1.74
TPM4P67936 C6orf10-204ENST00000447241 2148 ntAPPRIS P3 TSL 5 BASIC4.18□□□□□ -1.74
TPM4P67936 SLC8A1-207ENST00000406785 20987 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
TPM4P67936 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC4.17□□□□□ -1.74
TPM4P67936 BPY2-202ENST00000382585 321 ntAPPRIS P5 TSL 1 (best) BASIC4.17□□□□□ -1.74
TPM4P67936 LY6G5C-210ENST00000383237 674 ntAPPRIS P2 TSL 1 (best) BASIC4.17□□□□□ -1.74
TPM4P67936 LINC02337-201ENST00000401043 374 ntTSL 3 BASIC4.17□□□□□ -1.74
TPM4P67936 RPS27AP11-201ENST00000402798 447 ntBASIC4.17□□□□□ -1.74
TPM4P67936 AC096559.1-201ENST00000414086 399 ntTSL 2 BASIC4.17□□□□□ -1.74
TPM4P67936 RPL30P3-201ENST00000424262 333 ntBASIC4.17□□□□□ -1.74
TPM4P67936 AC009965.2-201ENST00000425328 970 ntBASIC4.17□□□□□ -1.74
TPM4P67936 AL583835.2-201ENST00000435483 500 ntTSL 2 BASIC4.17□□□□□ -1.74
TPM4P67936 SNORA71B-202ENST00000439232 272 ntBASIC4.17□□□□□ -1.74
TPM4P67936 AC104653.1-202ENST00000446401 390 ntTSL 3 BASIC4.17□□□□□ -1.74
TPM4P67936 GSTA9P-202ENST00000448991 521 ntTSL 3 BASIC4.17□□□□□ -1.74
TPM4P67936 LINC02527-201ENST00000449069 762 ntTSL 3 BASIC4.17□□□□□ -1.74
TPM4P67936 LINC01376-204ENST00000449124 626 ntTSL 2 BASIC4.17□□□□□ -1.74
TPM4P67936 SNRPGP5-201ENST00000456003 220 ntBASIC4.17□□□□□ -1.74
TPM4P67936 AC021205.1-201ENST00000468797 348 ntBASIC4.17□□□□□ -1.74
TPM4P67936 AC018816.1-205ENST00000489771 509 ntTSL 2 BASIC4.17□□□□□ -1.74
TPM4P67936 RPL7P47-201ENST00000497299 556 ntBASIC4.17□□□□□ -1.74
TPM4P67936 AC109830.1-202ENST00000515491 860 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
TPM4P67936 NDUFA5P2-201ENST00000519723 344 ntBASIC4.17□□□□□ -1.74
TPM4P67936 LINC01965-204ENST00000545549 575 ntTSL 4 BASIC4.17□□□□□ -1.74
TPM4P67936 AP001972.3-202ENST00000603012 375 ntTSL 3 BASIC4.17□□□□□ -1.74
TPM4P67936 AC084373.1-201ENST00000603311 235 ntBASIC4.17□□□□□ -1.74
TPM4P67936 RNU4-89P-201ENST00000607443 133 ntBASIC4.17□□□□□ -1.74
TPM4P67936 BPY2B-204ENST00000615850 321 ntAPPRIS P5 TSL 1 (best) BASIC4.17□□□□□ -1.74
TPM4P67936 BPY2C-204ENST00000618574 321 ntAPPRIS P5 TSL 1 (best) BASIC4.17□□□□□ -1.74
TPM4P67936 AC245452.5-201ENST00000620649 780 ntTSL 3 BASIC4.17□□□□□ -1.74
TPM4P67936 CENPI-202ENST00000372927 3262 ntAPPRIS P3 TSL 5 BASIC4.17□□□□□ -1.74
TPM4P67936 LRRC3B-205ENST00000456208 1551 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
TPM4P67936 SULT1E1-201ENST00000226444 1780 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
TPM4P67936 CRISP1-202ENST00000335847 1911 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
TPM4P67936 ORMDL1-201ENST00000325795 2692 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
TPM4P67936 UTS2-202ENST00000361696 559 ntAPPRIS ALT2 TSL 1 (best) BASIC4.16□□□□□ -1.74
TPM4P67936 C1orf105-201ENST00000367725 888 ntTSL 2 BASIC4.16□□□□□ -1.74
TPM4P67936 TRAJ18-201ENST00000390519 66 ntAPPRIS P1 BASIC4.16□□□□□ -1.74
TPM4P67936 RPS26P8-201ENST00000393490 348 ntBASIC4.16□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 126.1 ms