Protein–RNA interactions for Protein: P55290

CDH13, Cadherin-13, humanhuman

Predictions only

Length 713 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13P55290 IGKV1OR2-9-201ENST00000603957 287 ntBASIC4.34□□□□□ -1.71
CDH13P55290 IGKV1OR2-11-201ENST00000604120 287 ntBASIC4.34□□□□□ -1.71
CDH13P55290 MIR4500HG-205ENST00000606590 579 ntTSL 4 BASIC4.34□□□□□ -1.71
CDH13P55290 CYCSP41-201ENST00000616920 296 ntBASIC4.34□□□□□ -1.71
CDH13P55290 MIR6864-201ENST00000617935 70 ntBASIC4.34□□□□□ -1.71
CDH13P55290 VPS29-212ENST00000621131 1124 ntTSL 3 BASIC4.34□□□□□ -1.71
CDH13P55290 SATB1-AS1-266ENST00000630271 813 ntTSL 5 BASIC4.34□□□□□ -1.71
CDH13P55290 MEG8-222ENST00000637332 1237 ntTSL 5 BASIC4.34□□□□□ -1.71
CDH13P55290 CEP295-201ENST00000325212 8057 ntAPPRIS P2 TSL 2 BASIC4.34□□□□□ -1.71
CDH13P55290 AC018529.3-201ENST00000624212 2254 ntBASIC4.34□□□□□ -1.72
CDH13P55290 LINC01187-201ENST00000506431 2314 ntTSL 5 BASIC4.34□□□□□ -1.72
CDH13P55290 RNF13-202ENST00000361785 1939 ntTSL 2 BASIC4.33□□□□□ -1.72
CDH13P55290 RABGAP1L-202ENST00000325589 1880 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
CDH13P55290 C17orf78-204ENST00000615133 1862 ntAPPRIS P3 TSL 1 (best) BASIC4.33□□□□□ -1.72
CDH13P55290 LGI1-228ENST00000637689 1802 ntTSL 5 BASIC4.33□□□□□ -1.72
CDH13P55290 ADGRL3-215ENST00000512091 12636 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
CDH13P55290 MUCL1-201ENST00000308796 470 ntAPPRIS P2 TSL 1 (best) BASIC4.33□□□□□ -1.72
CDH13P55290 OR1L1-201ENST00000309623 933 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
CDH13P55290 PLET1-201ENST00000338832 1215 ntAPPRIS P1 TSL 5 BASIC4.33□□□□□ -1.72
CDH13P55290 ELSPBP1-201ENST00000339841 1052 ntAPPRIS P2 TSL 1 (best) BASIC4.33□□□□□ -1.72
CDH13P55290 OR51A7-201ENST00000359350 1048 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
CDH13P55290 OR1L1-202ENST00000373686 1083 ntBASIC4.33□□□□□ -1.72
CDH13P55290 RPS20P14-201ENST00000412545 360 ntBASIC4.33□□□□□ -1.72
CDH13P55290 PAICSP7-201ENST00000419829 962 ntBASIC4.33□□□□□ -1.72
CDH13P55290 TEX41-203ENST00000420472 765 ntTSL 3 BASIC4.33□□□□□ -1.72
CDH13P55290 AL138785.1-201ENST00000425821 331 ntBASIC4.33□□□□□ -1.72
CDH13P55290 AL451042.1-201ENST00000426353 544 ntTSL 3 BASIC4.33□□□□□ -1.72
CDH13P55290 AL645634.2-201ENST00000431956 411 ntTSL 3 BASIC4.33□□□□□ -1.72
CDH13P55290 AL049745.1-201ENST00000433953 286 ntBASIC4.33□□□□□ -1.72
CDH13P55290 AC105402.2-201ENST00000438503 358 ntBASIC4.33□□□□□ -1.72
CDH13P55290 AC064874.1-202ENST00000440101 287 ntTSL 3 BASIC4.33□□□□□ -1.72
CDH13P55290 MTCO1P53-201ENST00000441633 699 ntBASIC4.33□□□□□ -1.72
CDH13P55290 AC011753.3-201ENST00000443436 406 ntBASIC4.33□□□□□ -1.72
CDH13P55290 GYG2-AS1-201ENST00000445107 515 ntTSL 5 BASIC4.33□□□□□ -1.72
CDH13P55290 AL365271.1-201ENST00000448909 603 ntTSL 3 BASIC4.33□□□□□ -1.72
CDH13P55290 GJE1-201ENST00000450456 916 ntAPPRIS P1 TSL 5 BASIC4.33□□□□□ -1.72
CDH13P55290 C1orf143-202ENST00000491260 813 ntTSL 3 BASIC4.33□□□□□ -1.72
CDH13P55290 SEMA6A-AS2-201ENST00000508766 482 ntTSL 3 BASIC4.33□□□□□ -1.72
CDH13P55290 OR51K1P-201ENST00000510214 950 ntBASIC4.33□□□□□ -1.72
CDH13P55290 RN7SKP82-201ENST00000516786 223 ntBASIC4.33□□□□□ -1.72
CDH13P55290 PDCD5P1-201ENST00000543528 309 ntBASIC4.33□□□□□ -1.72
CDH13P55290 AC020612.3-201ENST00000550644 570 ntTSL 2 BASIC4.33□□□□□ -1.72
CDH13P55290 GPATCH2L-203ENST00000553588 776 ntTSL 2 BASIC4.33□□□□□ -1.72
CDH13P55290 AC026462.4-202ENST00000564331 532 ntTSL 3 BASIC4.33□□□□□ -1.72
CDH13P55290 AJ003147.1-201ENST00000576762 454 ntTSL 3 BASIC4.33□□□□□ -1.72
CDH13P55290 AC116003.2-201ENST00000579278 748 ntTSL 2 BASIC4.33□□□□□ -1.72
CDH13P55290 MIR4436B2-201ENST00000581415 91 ntBASIC4.33□□□□□ -1.72
CDH13P55290 MIR4436B1-201ENST00000583272 91 ntBASIC4.33□□□□□ -1.72
CDH13P55290 AC005899.1-201ENST00000584125 563 ntTSL 5 BASIC4.33□□□□□ -1.72
CDH13P55290 AC017100.2-201ENST00000584628 355 ntBASIC4.33□□□□□ -1.72
CDH13P55290 AC090912.3-201ENST00000609775 533 ntBASIC4.33□□□□□ -1.72
CDH13P55290 AL354821.1-201ENST00000617598 809 ntTSL 3 BASIC4.33□□□□□ -1.72
CDH13P55290 PDCD6IPP1-202ENST00000622242 1064 ntBASIC4.33□□□□□ -1.72
CDH13P55290 ZNF345-216ENST00000640438 963 ntTSL 5 BASIC4.33□□□□□ -1.72
CDH13P55290 FAM107B-229ENST00000622567 3510 ntAPPRIS P1 TSL 2 BASIC4.33□□□□□ -1.72
CDH13P55290 EIF2S1-202ENST00000466499 2390 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
CDH13P55290 AL049555.1-201ENST00000562834 1933 ntBASIC4.33□□□□□ -1.72
CDH13P55290 NT5C3A-203ENST00000396152 1788 ntAPPRIS P3 TSL 1 (best) BASIC4.32□□□□□ -1.72
CDH13P55290 TAS2R20-201ENST00000538986 1381 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
CDH13P55290 ZNF415-201ENST00000243643 2270 ntAPPRIS P3 TSL 1 (best) BASIC4.32□□□□□ -1.72
CDH13P55290 FSBP-203ENST00000611249 2181 ntAPPRIS P1 TSL 5 BASIC4.32□□□□□ -1.72
CDH13P55290 TAS2R9-201ENST00000240691 1075 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
CDH13P55290 RNU1-15P-201ENST00000353977 144 ntBASIC4.32□□□□□ -1.72
CDH13P55290 MIR448-201ENST00000362131 111 ntBASIC4.32□□□□□ -1.72
CDH13P55290 SNRPE-201ENST00000367208 355 ntTSL 2 BASIC4.32□□□□□ -1.72
CDH13P55290 FAM26F-203ENST00000368606 546 ntTSL 3 BASIC4.32□□□□□ -1.72
CDH13P55290 AC019155.1-201ENST00000382242 574 ntBASIC4.32□□□□□ -1.72
CDH13P55290 OR6C4-201ENST00000394256 1046 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
CDH13P55290 ESCO2-202ENST00000397418 720 ntTSL 5 BASIC4.32□□□□□ -1.72
CDH13P55290 TMSB4XP8-201ENST00000402089 135 ntBASIC4.32□□□□□ -1.72
CDH13P55290 CEBPZOS-205ENST00000406711 687 ntAPPRIS P1 TSL 5 BASIC4.32□□□□□ -1.72
CDH13P55290 AC073071.1-201ENST00000412410 388 ntTSL 3 BASIC4.32□□□□□ -1.72
CDH13P55290 SNRPFP1-201ENST00000414761 252 ntBASIC4.32□□□□□ -1.72
CDH13P55290 TMSB4XP6-201ENST00000415187 135 ntBASIC4.32□□□□□ -1.72
CDH13P55290 TMSB4XP1-201ENST00000424567 135 ntBASIC4.32□□□□□ -1.72
CDH13P55290 AC073335.1-201ENST00000427776 363 ntBASIC4.32□□□□□ -1.72
CDH13P55290 VN1R54P-201ENST00000435210 1049 ntBASIC4.32□□□□□ -1.72
CDH13P55290 UBE2V1P3-201ENST00000439651 417 ntBASIC4.32□□□□□ -1.72
CDH13P55290 CEACAMP6-201ENST00000452007 574 ntBASIC4.32□□□□□ -1.72
CDH13P55290 AL512303.1-201ENST00000458693 465 ntTSL 3 BASIC4.32□□□□□ -1.72
CDH13P55290 RN7SL329P-201ENST00000467740 299 ntBASIC4.32□□□□□ -1.72
CDH13P55290 AC098851.1-201ENST00000476561 570 ntTSL 4 BASIC4.32□□□□□ -1.72
CDH13P55290 GAPDHP39-201ENST00000481866 979 ntBASIC4.32□□□□□ -1.72
CDH13P55290 AC079203.1-201ENST00000487972 404 ntBASIC4.32□□□□□ -1.72
CDH13P55290 IGLV2-34-201ENST00000490007 283 ntBASIC4.32□□□□□ -1.72
CDH13P55290 HMGB1P21-201ENST00000502313 581 ntBASIC4.32□□□□□ -1.72
CDH13P55290 TRAV31-201ENST00000502780 342 ntBASIC4.32□□□□□ -1.72
CDH13P55290 UBE2V1P12-201ENST00000503954 474 ntBASIC4.32□□□□□ -1.72
CDH13P55290 EIF4E-208ENST00000505992 898 ntTSL 5 BASIC4.32□□□□□ -1.72
CDH13P55290 AC008780.2-201ENST00000509844 820 ntTSL 2 BASIC4.32□□□□□ -1.72
CDH13P55290 AC093752.1-206ENST00000511823 336 ntBASIC4.32□□□□□ -1.72
CDH13P55290 IGKV1OR2-1-201ENST00000514060 354 ntBASIC4.32□□□□□ -1.72
CDH13P55290 RNU6-488P-201ENST00000515918 99 ntBASIC4.32□□□□□ -1.72
CDH13P55290 RNA5SP497-201ENST00000516081 97 ntBASIC4.32□□□□□ -1.72
CDH13P55290 AC079209.1-201ENST00000519412 820 ntTSL 3 BASIC4.32□□□□□ -1.72
CDH13P55290 AL035078.3-201ENST00000525382 241 ntTSL 3 BASIC4.32□□□□□ -1.72
CDH13P55290 MTCO3P15-201ENST00000526563 574 ntBASIC4.32□□□□□ -1.72
CDH13P55290 AP001781.1-201ENST00000530977 207 ntBASIC4.32□□□□□ -1.72
CDH13P55290 LRRC37A5P-202ENST00000536054 1095 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
CDH13P55290 AC078880.1-201ENST00000546696 553 ntTSL 4 BASIC4.32□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 81.2 ms