Protein–RNA interactions for Protein: P49959

MRE11, Double-strand break repair protein MRE11, humanhuman

Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRE11P49959 AC008814.1-201ENST00000603797 406 ntBASIC5.84□□□□□ -1.47
MRE11P49959 CLPTM1LP1-201ENST00000604519 484 ntBASIC5.84□□□□□ -1.47
MRE11P49959 AL139286.2-201ENST00000606838 396 ntBASIC5.84□□□□□ -1.47
MRE11P49959 AC091979.2-201ENST00000607514 214 ntBASIC5.84□□□□□ -1.47
MRE11P49959 FRG1HP-204ENST00000617940 757 ntBASIC5.84□□□□□ -1.47
MRE11P49959 AC068631.1-223ENST00000625877 472 ntTSL 5 BASIC5.84□□□□□ -1.47
MRE11P49959 AL121759.2-201ENST00000636173 570 ntTSL 4 BASIC5.84□□□□□ -1.47
MRE11P49959 AC134980.1-211ENST00000638243 1094 ntTSL 2 BASIC5.84□□□□□ -1.47
MRE11P49959 MYNN-203ENST00000544106 4815 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
MRE11P49959 PTPN22-201ENST00000359785 3654 ntAPPRIS P2 TSL 1 (best) BASIC5.84□□□□□ -1.48
MRE11P49959 OR1L8-201ENST00000304865 1061 ntAPPRIS P1 BASIC5.83□□□□□ -1.48
MRE11P49959 Y_RNA.192-201ENST00000363977 102 ntBASIC5.83□□□□□ -1.48
MRE11P49959 RN7SKP227-201ENST00000364445 330 ntBASIC5.83□□□□□ -1.48
MRE11P49959 TRAV12-2-201ENST00000390437 445 ntAPPRIS P1 BASIC5.83□□□□□ -1.48
MRE11P49959 RNU6ATAC7P-201ENST00000408111 127 ntBASIC5.83□□□□□ -1.48
MRE11P49959 AL390774.1-201ENST00000411924 246 ntBASIC5.83□□□□□ -1.48
MRE11P49959 AC027644.1-201ENST00000419595 298 ntBASIC5.83□□□□□ -1.48
MRE11P49959 EIF4HP2-201ENST00000424380 563 ntBASIC5.83□□□□□ -1.48
MRE11P49959 BMS1P19-201ENST00000433925 393 ntBASIC5.83□□□□□ -1.48
MRE11P49959 AC023590.1-204ENST00000434023 431 ntTSL 5 BASIC5.83□□□□□ -1.48
MRE11P49959 MTCYBP34-201ENST00000439552 670 ntBASIC5.83□□□□□ -1.48
MRE11P49959 AL365258.1-201ENST00000440885 247 ntTSL 3 BASIC5.83□□□□□ -1.48
MRE11P49959 AL606662.1-201ENST00000445763 553 ntBASIC5.83□□□□□ -1.48
MRE11P49959 BMI1P1-201ENST00000445879 941 ntBASIC5.83□□□□□ -1.48
MRE11P49959 AC092832.2-201ENST00000456621 389 ntTSL 2 BASIC5.83□□□□□ -1.48
MRE11P49959 AC090114.3-201ENST00000479267 829 ntBASIC5.83□□□□□ -1.48
MRE11P49959 AC026979.1-201ENST00000492525 396 ntBASIC5.83□□□□□ -1.48
MRE11P49959 AC016651.1-201ENST00000502680 822 ntTSL 3 BASIC5.83□□□□□ -1.48
MRE11P49959 AC084024.2-201ENST00000503480 791 ntBASIC5.83□□□□□ -1.48
MRE11P49959 SNRPCP2-201ENST00000504370 475 ntBASIC5.83□□□□□ -1.48
MRE11P49959 STMN1P2-201ENST00000508435 439 ntBASIC5.83□□□□□ -1.48
MRE11P49959 AC006206.2-202ENST00000537714 648 ntTSL 5 BASIC5.83□□□□□ -1.48
MRE11P49959 AC024940.3-201ENST00000538551 316 ntBASIC5.83□□□□□ -1.48
MRE11P49959 AKIRIN1P1-201ENST00000547384 544 ntBASIC5.83□□□□□ -1.48
MRE11P49959 LINC02327-203ENST00000550122 738 ntTSL 2 BASIC5.83□□□□□ -1.48
MRE11P49959 AC144548.2-201ENST00000550231 946 ntTSL 3 BASIC5.83□□□□□ -1.48
MRE11P49959 PWRN4-201ENST00000563016 420 ntTSL 5 BASIC5.83□□□□□ -1.48
MRE11P49959 AL031600.2-201ENST00000563223 307 ntTSL 5 BASIC5.83□□□□□ -1.48
MRE11P49959 ARL2BPP3-202ENST00000580773 420 ntTSL 5 BASIC5.83□□□□□ -1.48
MRE11P49959 AC090125.1-201ENST00000581541 493 ntTSL 3 BASIC5.83□□□□□ -1.48
MRE11P49959 AC015802.3-201ENST00000590241 570 ntTSL 4 BASIC5.83□□□□□ -1.48
MRE11P49959 DARS-AS1-217ENST00000599279 544 ntTSL 5 BASIC5.83□□□□□ -1.48
MRE11P49959 RBM11P1-201ENST00000604951 799 ntBASIC5.83□□□□□ -1.48
MRE11P49959 AL135786.2-201ENST00000608422 615 ntBASIC5.83□□□□□ -1.48
MRE11P49959 AL592148.2-201ENST00000612210 372 ntBASIC5.83□□□□□ -1.48
MRE11P49959 AC004223.4-201ENST00000612426 332 ntBASIC5.83□□□□□ -1.48
MRE11P49959 AC090246.1-201ENST00000616499 426 ntBASIC5.83□□□□□ -1.48
MRE11P49959 CCL4L2-215ENST00000620055 537 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
MRE11P49959 AC063952.1-204ENST00000635496 927 ntTSL 5 BASIC5.83□□□□□ -1.48
MRE11P49959 SYNE2-203ENST00000357395 21555 ntTSL 5 BASIC5.83□□□□□ -1.48
MRE11P49959 AC139713.2-215ENST00000641428 5037 ntBASIC5.83□□□□□ -1.48
MRE11P49959 USP8-204ENST00000425032 3559 ntTSL 2 BASIC5.83□□□□□ -1.48
MRE11P49959 LINC01419-201ENST00000522365 1521 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
MRE11P49959 EPHA3-202ENST00000452448 2546 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
MRE11P49959 AC092435.4-201ENST00000623012 4159 ntBASIC5.83□□□□□ -1.48
MRE11P49959 C21orf91-201ENST00000284881 5433 ntAPPRIS P4 TSL 2 BASIC5.83□□□□□ -1.48
MRE11P49959 OFD1P9Y-201ENST00000417699 1491 ntBASIC5.83□□□□□ -1.48
MRE11P49959 IREB2-201ENST00000258886 6354 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
MRE11P49959 MRE11P1-201ENST00000464884 2127 ntBASIC5.83□□□□□ -1.48
MRE11P49959 TPTE2-205ENST00000400230 1793 ntAPPRIS P1 TSL 5 BASIC5.83□□□□□ -1.48
MRE11P49959 CLCA1-201ENST00000234701 3310 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
MRE11P49959 ZNF681-201ENST00000402377 6497 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
MRE11P49959 AC005332.5-201ENST00000591222 2919 ntBASIC5.82□□□□□ -1.48
MRE11P49959 WDHD1-201ENST00000360586 5996 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
MRE11P49959 TNFAIP8-207ENST00000513374 1385 ntTSL 2 BASIC5.82□□□□□ -1.48
MRE11P49959 ZFAND6-223ENST00000616533 1653 ntAPPRIS P1 TSL 5 BASIC5.82□□□□□ -1.48
MRE11P49959 IQGAP2-204ENST00000502745 3404 ntTSL 2 BASIC5.82□□□□□ -1.48
MRE11P49959 AL158835.1-203ENST00000415305 3149 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
MRE11P49959 MAPK10-320ENST00000641462 6696 ntBASIC5.82□□□□□ -1.48
MRE11P49959 IL6ST-212ENST00000522633 1878 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
MRE11P49959 PLCB1-211ENST00000617005 6458 ntTSL 5 BASIC5.82□□□□□ -1.48
MRE11P49959 SPAG5-AS1-202ENST00000424210 1551 ntTSL 2 BASIC5.82□□□□□ -1.48
MRE11P49959 SELL-201ENST00000236147 2436 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
MRE11P49959 CSTA-201ENST00000264474 751 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
MRE11P49959 snoZ40.1-201ENST00000364540 72 ntBASIC5.82□□□□□ -1.48
MRE11P49959 RNA5SP131-201ENST00000365452 119 ntBASIC5.82□□□□□ -1.48
MRE11P49959 RNU6-398P-201ENST00000384143 109 ntBASIC5.82□□□□□ -1.48
MRE11P49959 MIR195-201ENST00000385194 87 ntBASIC5.82□□□□□ -1.48
MRE11P49959 AL079342.2-201ENST00000403367 482 ntBASIC5.82□□□□□ -1.48
MRE11P49959 AC093157.1-203ENST00000416329 713 ntTSL 5 BASIC5.82□□□□□ -1.48
MRE11P49959 AL133268.3-201ENST00000428903 577 ntTSL 5 BASIC5.82□□□□□ -1.48
MRE11P49959 LINC01807-201ENST00000432481 676 ntTSL 3 BASIC5.82□□□□□ -1.48
MRE11P49959 AC097499.1-201ENST00000444277 208 ntBASIC5.82□□□□□ -1.48
MRE11P49959 AL049552.1-201ENST00000444302 577 ntTSL 2 BASIC5.82□□□□□ -1.48
MRE11P49959 CDC27P1-201ENST00000445384 715 ntBASIC5.82□□□□□ -1.48
MRE11P49959 LINC00601-201ENST00000456514 1168 ntTSL 3 BASIC5.82□□□□□ -1.48
MRE11P49959 EIF4A2P4-201ENST00000458691 1196 ntBASIC5.82□□□□□ -1.48
MRE11P49959 AC011979.1-201ENST00000472300 483 ntBASIC5.82□□□□□ -1.48
MRE11P49959 RPL30P6-201ENST00000475925 342 ntBASIC5.82□□□□□ -1.48
MRE11P49959 AC004884.2-201ENST00000476569 546 ntTSL 4 BASIC5.82□□□□□ -1.48
MRE11P49959 BX284632.1-201ENST00000478218 541 ntBASIC5.82□□□□□ -1.48
MRE11P49959 AC092045.1-201ENST00000495716 1231 ntBASIC5.82□□□□□ -1.48
MRE11P49959 AC021146.8-201ENST00000507455 733 ntBASIC5.82□□□□□ -1.48
MRE11P49959 LINC02100-201ENST00000512978 238 ntTSL 3 BASIC5.82□□□□□ -1.48
MRE11P49959 RPS27AP18-201ENST00000515536 459 ntBASIC5.82□□□□□ -1.48
MRE11P49959 AC103957.1-202ENST00000519814 735 ntTSL 3 BASIC5.82□□□□□ -1.48
MRE11P49959 AC022915.1-201ENST00000521660 289 ntTSL 3 BASIC5.82□□□□□ -1.48
MRE11P49959 MRPS16P1-201ENST00000523462 412 ntBASIC5.82□□□□□ -1.48
MRE11P49959 AC132219.1-201ENST00000524337 478 ntTSL 5 BASIC5.82□□□□□ -1.48
MRE11P49959 OR5M10-201ENST00000526812 1052 ntAPPRIS P1 BASIC5.82□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 119.3 ms