Protein–RNA interactions for Protein: P48729

CSNK1A1, Casein kinase I isoform alpha, humanhuman

Predictions only

Length 337 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1A1P48729 PPP1R42-212ENST00000522909 1282 ntAPPRIS ALT2 TSL 5 BASIC3.61□□□□□ -1.83
CSNK1A1P48729 AC113192.1-201ENST00000527270 321 ntTSL 3 BASIC3.61□□□□□ -1.83
CSNK1A1P48729 AP001360.2-201ENST00000534423 562 ntTSL 4 BASIC3.61□□□□□ -1.83
CSNK1A1P48729 AL590385.2-201ENST00000537821 553 ntTSL 5 BASIC3.61□□□□□ -1.83
CSNK1A1P48729 AC107016.1-201ENST00000550463 337 ntBASIC3.61□□□□□ -1.83
CSNK1A1P48729 AC090519.2-201ENST00000559034 655 ntTSL 5 BASIC3.61□□□□□ -1.83
CSNK1A1P48729 AC069366.1-201ENST00000583159 838 ntBASIC3.61□□□□□ -1.83
CSNK1A1P48729 DTNA-232ENST00000599844 853 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
CSNK1A1P48729 AL590235.2-201ENST00000602641 632 ntTSL 5 BASIC3.61□□□□□ -1.83
CSNK1A1P48729 AC090525.3-201ENST00000605601 189 ntBASIC3.61□□□□□ -1.83
CSNK1A1P48729 AC005962.2-201ENST00000611427 652 ntBASIC3.61□□□□□ -1.83
CSNK1A1P48729 AC023043.4-201ENST00000612081 449 ntBASIC3.61□□□□□ -1.83
CSNK1A1P48729 MIR6716-201ENST00000613413 80 ntBASIC3.61□□□□□ -1.83
CSNK1A1P48729 AC099669.2-201ENST00000616549 437 ntBASIC3.61□□□□□ -1.83
CSNK1A1P48729 MIR7151-201ENST00000617477 60 ntBASIC3.61□□□□□ -1.83
CSNK1A1P48729 AL713922.2-201ENST00000619384 716 ntBASIC3.61□□□□□ -1.83
CSNK1A1P48729 MIR6758-201ENST00000620653 63 ntBASIC3.61□□□□□ -1.83
CSNK1A1P48729 LGI1-209ENST00000627699 664 ntTSL 3 BASIC3.61□□□□□ -1.83
CSNK1A1P48729 CCSER1-201ENST00000432775 3927 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
CSNK1A1P48729 PNISR-201ENST00000369239 5112 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
CSNK1A1P48729 ETV1-203ENST00000403527 3363 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
CSNK1A1P48729 ZNF962P-201ENST00000443465 3140 ntBASIC3.6□□□□□ -1.83
CSNK1A1P48729 MYCBP2-211ENST00000544440 14664 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
CSNK1A1P48729 SLC17A4-203ENST00000439485 3699 ntTSL 5 BASIC3.6□□□□□ -1.83
CSNK1A1P48729 ATP6V1G3-203ENST00000367382 611 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
CSNK1A1P48729 BPY2-202ENST00000382585 321 ntAPPRIS P5 TSL 1 (best) BASIC3.6□□□□□ -1.83
CSNK1A1P48729 MIR141-201ENST00000384975 95 ntBASIC3.6□□□□□ -1.83
CSNK1A1P48729 OTUD6B-202ENST00000404789 1089 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
CSNK1A1P48729 AC104462.2-201ENST00000418402 271 ntTSL 3 BASIC3.6□□□□□ -1.83
CSNK1A1P48729 RPS12P23-201ENST00000419579 400 ntBASIC3.6□□□□□ -1.83
CSNK1A1P48729 AL391219.1-201ENST00000422570 483 ntBASIC3.6□□□□□ -1.83
CSNK1A1P48729 AC093698.1-201ENST00000423843 571 ntBASIC3.6□□□□□ -1.83
CSNK1A1P48729 AL358472.1-201ENST00000431295 329 ntBASIC3.6□□□□□ -1.83
CSNK1A1P48729 RPL7P28-201ENST00000437739 740 ntBASIC3.6□□□□□ -1.83
CSNK1A1P48729 AC136489.1-201ENST00000438181 717 ntTSL 3 BASIC3.6□□□□□ -1.83
CSNK1A1P48729 TRIM60P9Y-201ENST00000438459 816 ntBASIC3.6□□□□□ -1.83
CSNK1A1P48729 AC003092.1-202ENST00000438538 743 ntTSL 3 BASIC3.6□□□□□ -1.83
CSNK1A1P48729 AC015971.1-202ENST00000439077 514 ntTSL 3 BASIC3.6□□□□□ -1.83
CSNK1A1P48729 TRIM60P11Y-201ENST00000445313 801 ntBASIC3.6□□□□□ -1.83
CSNK1A1P48729 AL512380.1-202ENST00000447728 543 ntTSL 5 BASIC3.6□□□□□ -1.83
CSNK1A1P48729 RBBP6-204ENST00000452655 854 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
CSNK1A1P48729 FABP3P2-201ENST00000453169 399 ntBASIC3.6□□□□□ -1.83
CSNK1A1P48729 AL603839.1-201ENST00000453437 432 ntTSL 2 BASIC3.6□□□□□ -1.83
CSNK1A1P48729 AL133477.1-201ENST00000457472 514 ntBASIC3.6□□□□□ -1.83
CSNK1A1P48729 RN7SL271P-201ENST00000487601 295 ntBASIC3.6□□□□□ -1.83
CSNK1A1P48729 AC026979.1-201ENST00000492525 396 ntBASIC3.6□□□□□ -1.83
CSNK1A1P48729 FTH1P24-201ENST00000503502 462 ntBASIC3.6□□□□□ -1.83
CSNK1A1P48729 AC112198.3-201ENST00000505950 441 ntTSL 3 BASIC3.6□□□□□ -1.83
CSNK1A1P48729 MFAP3L-206ENST00000506110 548 ntTSL 3 BASIC3.6□□□□□ -1.83
CSNK1A1P48729 LINC01088-203ENST00000507476 785 ntTSL 3 BASIC3.6□□□□□ -1.83
CSNK1A1P48729 AC112196.1-201ENST00000515092 832 ntTSL 3 BASIC3.6□□□□□ -1.83
CSNK1A1P48729 RNU6-760P-201ENST00000516078 97 ntBASIC3.6□□□□□ -1.83
CSNK1A1P48729 AC124069.1-201ENST00000517454 735 ntTSL 3 BASIC3.6□□□□□ -1.83
CSNK1A1P48729 TBCA-203ENST00000517679 545 ntTSL 3 BASIC3.6□□□□□ -1.83
CSNK1A1P48729 AP003733.3-201ENST00000524942 788 ntTSL 2 BASIC3.6□□□□□ -1.83
CSNK1A1P48729 AC013762.1-201ENST00000531136 467 ntTSL 3 BASIC3.6□□□□□ -1.83
CSNK1A1P48729 AC012414.2-201ENST00000559474 187 ntBASIC3.6□□□□□ -1.83
CSNK1A1P48729 AC023158.1-201ENST00000561632 1025 ntBASIC3.6□□□□□ -1.83
CSNK1A1P48729 LINC02131-201ENST00000563289 419 ntTSL 2 BASIC3.6□□□□□ -1.83
CSNK1A1P48729 AC007599.1-201ENST00000568688 1174 ntBASIC3.6□□□□□ -1.83
CSNK1A1P48729 AC127540.1-201ENST00000580311 689 ntTSL 5 BASIC3.6□□□□□ -1.83
CSNK1A1P48729 STARD13-AS-235ENST00000609335 855 ntTSL 5 BASIC3.6□□□□□ -1.83
CSNK1A1P48729 AC128687.2-201ENST00000609657 566 ntBASIC3.6□□□□□ -1.83
CSNK1A1P48729 AC243829.4-202ENST00000610845 410 ntTSL 5 BASIC3.6□□□□□ -1.83
CSNK1A1P48729 BPY2B-204ENST00000615850 321 ntAPPRIS P5 TSL 1 (best) BASIC3.6□□□□□ -1.83
CSNK1A1P48729 AC006338.2-201ENST00000616864 791 ntBASIC3.6□□□□□ -1.83
CSNK1A1P48729 BPY2C-204ENST00000618574 321 ntAPPRIS P5 TSL 1 (best) BASIC3.6□□□□□ -1.83
CSNK1A1P48729 LINC00923-207ENST00000619015 505 ntTSL 5 BASIC3.6□□□□□ -1.83
CSNK1A1P48729 AC023490.1-202ENST00000620909 820 ntTSL 5 BASIC3.6□□□□□ -1.83
CSNK1A1P48729 AC095038.2-201ENST00000621464 1070 ntBASIC3.6□□□□□ -1.83
CSNK1A1P48729 MIR6830-201ENST00000636015 70 ntBASIC3.6□□□□□ -1.83
CSNK1A1P48729 FEZ2-201ENST00000305852 1782 ntTSL 5 BASIC3.6□□□□□ -1.83
CSNK1A1P48729 CRB1-201ENST00000367397 9023 ntTSL 2 BASIC3.6□□□□□ -1.83
CSNK1A1P48729 MACF1-204ENST00000372915 23440 ntAPPRIS ALT2 TSL 5 BASIC3.6□□□□□ -1.83
CSNK1A1P48729 TJP1-204ENST00000400011 6764 ntAPPRIS ALT2 TSL 1 (best) BASIC3.59□□□□□ -1.83
CSNK1A1P48729 SUCNR1-201ENST00000362032 4181 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
CSNK1A1P48729 UBE2D2-201ENST00000253815 444 ntAPPRIS ALT1 TSL 5 BASIC3.59□□□□□ -1.83
CSNK1A1P48729 ENSAP1-201ENST00000392855 326 ntBASIC3.59□□□□□ -1.83
CSNK1A1P48729 RPS26P8-201ENST00000393490 348 ntBASIC3.59□□□□□ -1.83
CSNK1A1P48729 ZNF603P-201ENST00000405613 487 ntBASIC3.59□□□□□ -1.83
CSNK1A1P48729 SNORA3C-201ENST00000408792 125 ntBASIC3.59□□□□□ -1.83
CSNK1A1P48729 RNA5SP306-201ENST00000411087 107 ntBASIC3.59□□□□□ -1.83
CSNK1A1P48729 AL391807.1-202ENST00000419979 534 ntTSL 2 BASIC3.59□□□□□ -1.83
CSNK1A1P48729 AC092647.1-201ENST00000420654 287 ntBASIC3.59□□□□□ -1.83
CSNK1A1P48729 AC234779.1-201ENST00000425910 285 ntBASIC3.59□□□□□ -1.83
CSNK1A1P48729 AP000233.1-201ENST00000426609 291 ntTSL 3 BASIC3.59□□□□□ -1.83
CSNK1A1P48729 LINC00266-4P-201ENST00000427373 842 ntTSL 3 BASIC3.59□□□□□ -1.83
CSNK1A1P48729 YY1P1-201ENST00000427625 668 ntBASIC3.59□□□□□ -1.83
CSNK1A1P48729 AL160175.1-201ENST00000428124 247 ntBASIC3.59□□□□□ -1.83
CSNK1A1P48729 C4BPAP2-201ENST00000428434 478 ntBASIC3.59□□□□□ -1.83
CSNK1A1P48729 VDAC1P6-201ENST00000430062 855 ntBASIC3.59□□□□□ -1.83
CSNK1A1P48729 TRIM60P13-201ENST00000432350 1283 ntBASIC3.59□□□□□ -1.83
CSNK1A1P48729 LINC01826-201ENST00000432894 584 ntTSL 4 BASIC3.59□□□□□ -1.83
CSNK1A1P48729 AC245517.2-201ENST00000442890 346 ntBASIC3.59□□□□□ -1.83
CSNK1A1P48729 VN1R25P-201ENST00000443385 738 ntBASIC3.59□□□□□ -1.83
CSNK1A1P48729 H2AFZP6-201ENST00000444403 394 ntBASIC3.59□□□□□ -1.83
CSNK1A1P48729 VN1R40P-201ENST00000455196 941 ntBASIC3.59□□□□□ -1.83
CSNK1A1P48729 RPS23P7-201ENST00000466210 444 ntBASIC3.59□□□□□ -1.83
CSNK1A1P48729 AC026353.1-201ENST00000470523 558 ntTSL 2 BASIC3.59□□□□□ -1.83
CSNK1A1P48729 CMAHP-205ENST00000471416 1118 ntTSL 2 BASIC3.59□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 73.3 ms