Protein–RNA interactions for Protein: P43378

PTPN9, Tyrosine-protein phosphatase non-receptor type 9, humanhuman

Predictions only

Length 593 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN9P43378 LINC00901.1-201ENST00000617252 152 ntBASIC4.75□□□□□ -1.65
PTPN9P43378 AL157770.1-201ENST00000623049 439 ntBASIC4.75□□□□□ -1.65
PTPN9P43378 AC019226.2-201ENST00000625973 424 ntBASIC4.75□□□□□ -1.65
PTPN9P43378 ARHGAP21-218ENST00000636789 4210 ntTSL 2 BASIC4.75□□□□□ -1.65
PTPN9P43378 MTND4P10-201ENST00000446199 1363 ntBASIC4.75□□□□□ -1.65
PTPN9P43378 DAOA-211ENST00000618629 1368 ntAPPRIS P3 TSL 5 BASIC4.75□□□□□ -1.65
PTPN9P43378 HIPK3-204ENST00000525975 3668 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
PTPN9P43378 LINC02070-201ENST00000460586 1321 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
PTPN9P43378 CACNB4-273ENST00000638091 4061 ntTSL 5 BASIC4.74□□□□□ -1.65
PTPN9P43378 DHX40P1-201ENST00000588725 1412 ntBASIC4.74□□□□□ -1.65
PTPN9P43378 ABCA8-215ENST00000615593 3264 ntTSL 5 BASIC4.74□□□□□ -1.65
PTPN9P43378 OR52B1P-201ENST00000316506 909 ntBASIC4.74□□□□□ -1.65
PTPN9P43378 AC079741.1-201ENST00000321498 212 ntBASIC4.74□□□□□ -1.65
PTPN9P43378 ELSPBP1-201ENST00000339841 1052 ntAPPRIS P2 TSL 1 (best) BASIC4.74□□□□□ -1.65
PTPN9P43378 RNU6-1242P-201ENST00000391052 103 ntBASIC4.74□□□□□ -1.65
PTPN9P43378 RRM2B-203ENST00000395912 900 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
PTPN9P43378 AL049545.1-201ENST00000401856 572 ntBASIC4.74□□□□□ -1.65
PTPN9P43378 PGAP1-203ENST00000409188 1246 ntTSL 2 BASIC4.74□□□□□ -1.65
PTPN9P43378 LINC01065-201ENST00000417989 577 ntTSL 3 BASIC4.74□□□□□ -1.65
PTPN9P43378 LINC02020-202ENST00000421006 575 ntTSL 4 BASIC4.74□□□□□ -1.65
PTPN9P43378 AL159174.1-202ENST00000425588 442 ntTSL 3 BASIC4.74□□□□□ -1.65
PTPN9P43378 DYNLL1P7-201ENST00000429273 258 ntBASIC4.74□□□□□ -1.65
PTPN9P43378 HIGD1AP4-201ENST00000430194 280 ntBASIC4.74□□□□□ -1.65
PTPN9P43378 AL031123.1-201ENST00000432823 568 ntTSL 2 BASIC4.74□□□□□ -1.65
PTPN9P43378 ARHGAP26-IT1-201ENST00000433186 388 ntTSL 3 BASIC4.74□□□□□ -1.65
PTPN9P43378 LINC00484-204ENST00000439438 454 ntTSL 3 BASIC4.74□□□□□ -1.65
PTPN9P43378 LINC00376-201ENST00000439454 693 ntTSL 5 BASIC4.74□□□□□ -1.65
PTPN9P43378 AP003774.4-201ENST00000447028 672 ntTSL 2 BASIC4.74□□□□□ -1.65
PTPN9P43378 AC073587.1-201ENST00000447093 876 ntBASIC4.74□□□□□ -1.65
PTPN9P43378 AC007327.1-201ENST00000447461 264 ntBASIC4.74□□□□□ -1.65
PTPN9P43378 AC073264.2-201ENST00000448886 166 ntBASIC4.74□□□□□ -1.65
PTPN9P43378 AC233982.1-201ENST00000451247 436 ntBASIC4.74□□□□□ -1.65
PTPN9P43378 AL583803.1-201ENST00000454262 334 ntTSL 3 BASIC4.74□□□□□ -1.65
PTPN9P43378 AL512303.1-201ENST00000458693 465 ntTSL 3 BASIC4.74□□□□□ -1.65
PTPN9P43378 RN7SL809P-201ENST00000482040 297 ntBASIC4.74□□□□□ -1.65
PTPN9P43378 C1orf143-202ENST00000491260 813 ntTSL 3 BASIC4.74□□□□□ -1.65
PTPN9P43378 AC108022.1-201ENST00000493466 478 ntBASIC4.74□□□□□ -1.65
PTPN9P43378 CASP12-210ENST00000494737 961 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
PTPN9P43378 AC106821.1-201ENST00000502861 572 ntTSL 5 BASIC4.74□□□□□ -1.65
PTPN9P43378 AC034244.1-201ENST00000507687 207 ntBASIC4.74□□□□□ -1.65
PTPN9P43378 DYNLL1P4-201ENST00000549314 266 ntBASIC4.74□□□□□ -1.65
PTPN9P43378 MRPS36P5-201ENST00000551909 298 ntBASIC4.74□□□□□ -1.65
PTPN9P43378 AC044913.1-201ENST00000557200 430 ntBASIC4.74□□□□□ -1.65
PTPN9P43378 AC091117.1-201ENST00000560967 426 ntTSL 5 BASIC4.74□□□□□ -1.65
PTPN9P43378 AC023813.2-201ENST00000564321 469 ntBASIC4.74□□□□□ -1.65
PTPN9P43378 AC133065.1-201ENST00000572017 575 ntTSL 3 BASIC4.74□□□□□ -1.65
PTPN9P43378 MIR5708-201ENST00000579723 85 ntBASIC4.74□□□□□ -1.65
PTPN9P43378 AP005901.2-201ENST00000581690 525 ntTSL 3 BASIC4.74□□□□□ -1.65
PTPN9P43378 CERS6-AS1-204ENST00000599361 536 ntTSL 4 BASIC4.74□□□□□ -1.65
PTPN9P43378 AP005137.2-201ENST00000609238 400 ntBASIC4.74□□□□□ -1.65
PTPN9P43378 AC231759.1-201ENST00000616455 597 ntBASIC4.74□□□□□ -1.65
PTPN9P43378 AP002967.1-201ENST00000624203 539 ntBASIC4.74□□□□□ -1.65
PTPN9P43378 AC109462.4-201ENST00000637882 581 ntTSL 5 BASIC4.74□□□□□ -1.65
PTPN9P43378 OR52N4-202ENST00000641350 1276 ntAPPRIS P1 BASIC4.74□□□□□ -1.65
PTPN9P43378 ZNF663P-202ENST00000641770 1131 ntBASIC4.74□□□□□ -1.65
PTPN9P43378 CHL1-216ENST00000620033 7311 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
PTPN9P43378 BCLAF1-207ENST00000527759 4373 ntAPPRIS ALT2 TSL 1 (best) BASIC4.74□□□□□ -1.65
PTPN9P43378 ZNF445-201ENST00000396077 18299 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
PTPN9P43378 ENPP3-201ENST00000357639 3162 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
PTPN9P43378 RABGAP1L-203ENST00000347255 1744 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
PTPN9P43378 STON1-GTF2A1L-204ENST00000405008 3821 ntAPPRIS P1 TSL 5 BASIC4.74□□□□□ -1.65
PTPN9P43378 AL672167.1-203ENST00000641299 2975 ntBASIC4.74□□□□□ -1.65
PTPN9P43378 POPDC3-201ENST00000254765 1345 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
PTPN9P43378 BMPR2-201ENST00000374574 9683 ntTSL 2 BASIC4.73□□□□□ -1.65
PTPN9P43378 AC006994.2-202ENST00000639259 3828 ntTSL 5 BASIC4.73□□□□□ -1.65
PTPN9P43378 UGT2A2-201ENST00000604021 1544 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
PTPN9P43378 OR4E2-202ENST00000641524 2855 ntAPPRIS P1 BASIC4.73□□□□□ -1.65
PTPN9P43378 SERPINA7-202ENST00000372563 1600 ntAPPRIS P1 TSL 5 BASIC4.73□□□□□ -1.65
PTPN9P43378 BCLAF1P2-201ENST00000624956 2609 ntBASIC4.73□□□□□ -1.65
PTPN9P43378 AC119744.1-201ENST00000454746 1715 ntBASIC4.73□□□□□ -1.65
PTPN9P43378 MAP3K19-201ENST00000358371 3719 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
PTPN9P43378 OR1L1-201ENST00000309623 933 ntAPPRIS P1 BASIC4.73□□□□□ -1.65
PTPN9P43378 OR1L1-202ENST00000373686 1083 ntBASIC4.73□□□□□ -1.65
PTPN9P43378 MLLT3-201ENST00000380321 708 ntTSL 3 BASIC4.73□□□□□ -1.65
PTPN9P43378 MIR659-201ENST00000384963 97 ntBASIC4.73□□□□□ -1.65
PTPN9P43378 RNU6-575P-201ENST00000411326 105 ntBASIC4.73□□□□□ -1.65
PTPN9P43378 OR51A3P-201ENST00000413596 924 ntBASIC4.73□□□□□ -1.65
PTPN9P43378 AL590139.1-201ENST00000416267 400 ntBASIC4.73□□□□□ -1.65
PTPN9P43378 AC009302.1-201ENST00000417147 390 ntBASIC4.73□□□□□ -1.65
PTPN9P43378 AL133419.1-201ENST00000423153 640 ntTSL 3 BASIC4.73□□□□□ -1.65
PTPN9P43378 AL391832.1-201ENST00000423963 423 ntTSL 5 BASIC4.73□□□□□ -1.65
PTPN9P43378 LINC01826-201ENST00000432894 584 ntTSL 4 BASIC4.73□□□□□ -1.65
PTPN9P43378 GTF2IP7-202ENST00000436677 309 ntBASIC4.73□□□□□ -1.65
PTPN9P43378 AC092013.1-201ENST00000438795 332 ntBASIC4.73□□□□□ -1.65
PTPN9P43378 ACTR3P2-201ENST00000439585 1257 ntBASIC4.73□□□□□ -1.65
PTPN9P43378 UBE2V1P5-201ENST00000440070 405 ntBASIC4.73□□□□□ -1.65
PTPN9P43378 AP000146.1-202ENST00000441666 441 ntTSL 3 BASIC4.73□□□□□ -1.65
PTPN9P43378 AL513412.1-201ENST00000445708 553 ntTSL 4 BASIC4.73□□□□□ -1.65
PTPN9P43378 AL162591.2-201ENST00000449634 317 ntBASIC4.73□□□□□ -1.65
PTPN9P43378 RPL37P3-201ENST00000456825 293 ntBASIC4.73□□□□□ -1.65
PTPN9P43378 MTND2P14-201ENST00000482139 351 ntBASIC4.73□□□□□ -1.65
PTPN9P43378 LINC01181-201ENST00000503718 556 ntTSL 4 BASIC4.73□□□□□ -1.65
PTPN9P43378 IGBP1P5-201ENST00000507524 1000 ntBASIC4.73□□□□□ -1.65
PTPN9P43378 TATDN1-202ENST00000517678 815 ntTSL 3 BASIC4.73□□□□□ -1.65
PTPN9P43378 AC067817.1-201ENST00000518535 356 ntTSL 2 BASIC4.73□□□□□ -1.65
PTPN9P43378 IGHVIII-38-1-201ENST00000521454 282 ntBASIC4.73□□□□□ -1.65
PTPN9P43378 LINC02326-201ENST00000552028 540 ntTSL 3 BASIC4.73□□□□□ -1.65
PTPN9P43378 AC063949.1-201ENST00000552900 865 ntBASIC4.73□□□□□ -1.65
PTPN9P43378 AC020891.3-201ENST00000560011 363 ntTSL 3 BASIC4.73□□□□□ -1.65
PTPN9P43378 AC021351.1-201ENST00000560886 652 ntTSL 5 BASIC4.73□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 79.3 ms