Protein–RNA interactions for Protein: P41238

APOBEC1, C->U-editing enzyme APOBEC-1, humanhuman

Known RBP Predictions only

Length 236 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC1P41238 LINC02311-201ENST00000556144 383 ntTSL 3 BASIC4.23□□□□□ -1.73
APOBEC1P41238 AC002094.2-201ENST00000577850 1121 ntTSL 5 BASIC4.23□□□□□ -1.73
APOBEC1P41238 AC011824.2-203ENST00000579975 633 ntTSL 3 BASIC4.23□□□□□ -1.73
APOBEC1P41238 AC017100.2-201ENST00000584628 355 ntBASIC4.23□□□□□ -1.73
APOBEC1P41238 BNIP3P26-201ENST00000600827 554 ntBASIC4.23□□□□□ -1.73
APOBEC1P41238 AC098617.1-216ENST00000602099 708 ntTSL 5 BASIC4.23□□□□□ -1.73
APOBEC1P41238 AC025811.1-201ENST00000604312 472 ntBASIC4.23□□□□□ -1.73
APOBEC1P41238 AC010998.2-201ENST00000605549 625 ntTSL 5 BASIC4.23□□□□□ -1.73
APOBEC1P41238 COX6CP4-201ENST00000605798 228 ntBASIC4.23□□□□□ -1.73
APOBEC1P41238 AC007308.1-201ENST00000608856 373 ntTSL 3 BASIC4.23□□□□□ -1.73
APOBEC1P41238 AC107075.1-201ENST00000613695 314 ntBASIC4.23□□□□□ -1.73
APOBEC1P41238 RPL36A-210ENST00000614077 881 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
APOBEC1P41238 AC120349.3-201ENST00000624377 529 ntBASIC4.23□□□□□ -1.73
APOBEC1P41238 AC079416.3-201ENST00000624479 549 ntBASIC4.23□□□□□ -1.73
APOBEC1P41238 AP003072.4-201ENST00000624580 310 ntBASIC4.23□□□□□ -1.73
APOBEC1P41238 AC008703.1-201ENST00000637629 1174 ntTSL 5 BASIC4.23□□□□□ -1.73
APOBEC1P41238 NAIP-210ENST00000523981 4543 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
APOBEC1P41238 B3GNT5-201ENST00000326505 4123 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
APOBEC1P41238 TRIM77-201ENST00000398290 1353 ntAPPRIS P1 TSL 5 BASIC4.23□□□□□ -1.73
APOBEC1P41238 ASB5-201ENST00000296525 3031 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
APOBEC1P41238 IL1RL1-201ENST00000233954 2058 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
APOBEC1P41238 INPP4B-220ENST00000513000 8831 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
APOBEC1P41238 PSMA4-201ENST00000044462 4411 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
APOBEC1P41238 DTNA-229ENST00000598142 2509 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
APOBEC1P41238 STEAP2-203ENST00000394622 6612 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
APOBEC1P41238 MRPL50-201ENST00000374865 3332 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
APOBEC1P41238 LRP6-201ENST00000261349 10020 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
APOBEC1P41238 ENPP3-201ENST00000357639 3162 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
APOBEC1P41238 CYLD-212ENST00000568704 3292 ntTSL 5 BASIC4.22□□□□□ -1.73
APOBEC1P41238 AC125257.1-201ENST00000560400 2930 ntBASIC4.22□□□□□ -1.73
APOBEC1P41238 SLC13A1-201ENST00000194130 3815 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
APOBEC1P41238 CHD9-221ENST00000615216 10603 ntTSL 5 BASIC4.22□□□□□ -1.73
APOBEC1P41238 PTPN13-201ENST00000316707 7546 ntAPPRIS ALT2 TSL 1 (best) BASIC4.22□□□□□ -1.73
APOBEC1P41238 OR10K1-203ENST00000641432 3775 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
APOBEC1P41238 RASA1-205ENST00000512763 3060 ntAPPRIS ALT2 TSL 2 BASIC4.22□□□□□ -1.73
APOBEC1P41238 SGIP1-204ENST00000371039 4080 ntAPPRIS ALT2 TSL 1 (best) BASIC4.22□□□□□ -1.73
APOBEC1P41238 FOXP2-220ENST00000634411 4065 ntTSL 5 BASIC4.22□□□□□ -1.73
APOBEC1P41238 ADCY10-202ENST00000367851 5051 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
APOBEC1P41238 ZNF732-202ENST00000619749 2179 ntAPPRIS ALT2 TSL 2 BASIC4.22□□□□□ -1.73
APOBEC1P41238 RASSF6-204ENST00000395777 2735 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
APOBEC1P41238 PDCL2-201ENST00000295645 861 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
APOBEC1P41238 CKS1B-201ENST00000308987 759 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
APOBEC1P41238 MLIP-203ENST00000370877 1234 ntAPPRIS ALT2 TSL 5 BASIC4.22□□□□□ -1.73
APOBEC1P41238 SNORA68.2-201ENST00000391263 128 ntBASIC4.22□□□□□ -1.73
APOBEC1P41238 CACYBP-203ENST00000406752 243 ntTSL 5 BASIC4.22□□□□□ -1.73
APOBEC1P41238 RPL31P52-201ENST00000407532 367 ntBASIC4.22□□□□□ -1.73
APOBEC1P41238 AC096669.1-202ENST00000413708 616 ntTSL 2 BASIC4.22□□□□□ -1.73
APOBEC1P41238 AC107081.1-201ENST00000414975 361 ntBASIC4.22□□□□□ -1.73
APOBEC1P41238 LINC01065-201ENST00000417989 577 ntTSL 3 BASIC4.22□□□□□ -1.73
APOBEC1P41238 LINC01646-201ENST00000420522 682 ntTSL 3 BASIC4.22□□□□□ -1.73
APOBEC1P41238 AL590609.2-201ENST00000421430 368 ntBASIC4.22□□□□□ -1.73
APOBEC1P41238 LINC01040-201ENST00000425048 666 ntTSL 2 BASIC4.22□□□□□ -1.73
APOBEC1P41238 AP000695.2-201ENST00000428667 715 ntTSL 5 BASIC4.22□□□□□ -1.73
APOBEC1P41238 AL451070.1-201ENST00000430143 439 ntTSL 5 BASIC4.22□□□□□ -1.73
APOBEC1P41238 AC068058.1-201ENST00000435782 389 ntTSL 5 BASIC4.22□□□□□ -1.73
APOBEC1P41238 ZBTB40-IT1-201ENST00000438551 273 ntTSL 3 BASIC4.22□□□□□ -1.73
APOBEC1P41238 AC006466.1-201ENST00000438721 289 ntBASIC4.22□□□□□ -1.73
APOBEC1P41238 AC068491.2-201ENST00000438897 617 ntTSL 2 BASIC4.22□□□□□ -1.73
APOBEC1P41238 AC093155.1-201ENST00000440164 826 ntBASIC4.22□□□□□ -1.73
APOBEC1P41238 AC099654.1-201ENST00000442649 407 ntTSL 3 BASIC4.22□□□□□ -1.73
APOBEC1P41238 TDGF1P1-201ENST00000445734 527 ntBASIC4.22□□□□□ -1.73
APOBEC1P41238 AC004160.1-211ENST00000445839 565 ntTSL 4 BASIC4.22□□□□□ -1.73
APOBEC1P41238 AL589765.3-201ENST00000446084 462 ntBASIC4.22□□□□□ -1.73
APOBEC1P41238 RPL23AP15-201ENST00000450202 459 ntBASIC4.22□□□□□ -1.73
APOBEC1P41238 LINC01767-201ENST00000451914 545 ntTSL 2 BASIC4.22□□□□□ -1.73
APOBEC1P41238 NECAP1P2-201ENST00000455668 727 ntBASIC4.22□□□□□ -1.73
APOBEC1P41238 AL445433.1-201ENST00000457507 257 ntBASIC4.22□□□□□ -1.73
APOBEC1P41238 AC108751.2-201ENST00000469993 231 ntBASIC4.22□□□□□ -1.73
APOBEC1P41238 ATP6V1G1P6-201ENST00000504007 334 ntBASIC4.22□□□□□ -1.73
APOBEC1P41238 AC011352.3-201ENST00000505162 593 ntBASIC4.22□□□□□ -1.73
APOBEC1P41238 AL033397.2-201ENST00000508884 547 ntTSL 2 BASIC4.22□□□□□ -1.73
APOBEC1P41238 AC093297.1-201ENST00000511712 591 ntTSL 4 BASIC4.22□□□□□ -1.73
APOBEC1P41238 RNU6-488P-201ENST00000515918 99 ntBASIC4.22□□□□□ -1.73
APOBEC1P41238 AC099520.1-208ENST00000518276 472 ntTSL 3 BASIC4.22□□□□□ -1.73
APOBEC1P41238 AC087808.1-201ENST00000520501 361 ntBASIC4.22□□□□□ -1.73
APOBEC1P41238 AC109466.1-214ENST00000522762 583 ntTSL 2 BASIC4.22□□□□□ -1.73
APOBEC1P41238 MRPS36P5-201ENST00000551909 298 ntBASIC4.22□□□□□ -1.73
APOBEC1P41238 GAPLINC-202ENST00000579007 643 ntTSL 3 BASIC4.22□□□□□ -1.73
APOBEC1P41238 HMGB2P1-201ENST00000591146 634 ntBASIC4.22□□□□□ -1.73
APOBEC1P41238 AC010320.2-202ENST00000599125 595 ntTSL 4 BASIC4.22□□□□□ -1.73
APOBEC1P41238 AL390838.2-201ENST00000602394 274 ntBASIC4.22□□□□□ -1.73
APOBEC1P41238 FAM25E-202ENST00000608562 189 ntBASIC4.22□□□□□ -1.73
APOBEC1P41238 AC092954.1-201ENST00000609121 445 ntBASIC4.22□□□□□ -1.73
APOBEC1P41238 AL359757.1-201ENST00000623176 255 ntBASIC4.22□□□□□ -1.73
APOBEC1P41238 AC019226.2-201ENST00000625973 424 ntBASIC4.22□□□□□ -1.73
APOBEC1P41238 MTND2P41-201ENST00000637599 773 ntBASIC4.22□□□□□ -1.73
APOBEC1P41238 SALL4P2-201ENST00000423288 2910 ntBASIC4.22□□□□□ -1.73
APOBEC1P41238 USP44-201ENST00000258499 4022 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
APOBEC1P41238 AC064875.1-201ENST00000425974 1942 ntTSL 2 BASIC4.22□□□□□ -1.73
APOBEC1P41238 PARP11-201ENST00000228820 4424 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
APOBEC1P41238 PARP11-203ENST00000427057 4406 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
APOBEC1P41238 MAPK10-303ENST00000641324 3959 ntBASIC4.22□□□□□ -1.73
APOBEC1P41238 ITGB1-205ENST00000423113 3729 ntAPPRIS ALT1 TSL 5 BASIC4.22□□□□□ -1.73
APOBEC1P41238 USP29-202ENST00000598197 3284 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
APOBEC1P41238 C1orf112-202ENST00000359326 4002 ntAPPRIS P3 TSL 1 (best) BASIC4.22□□□□□ -1.73
APOBEC1P41238 AL451142.2-201ENST00000429076 2090 ntBASIC4.22□□□□□ -1.73
APOBEC1P41238 ODAM-201ENST00000396094 1319 ntAPPRIS P1 TSL 5 BASIC4.21□□□□□ -1.73
APOBEC1P41238 AC092821.1-201ENST00000640129 4180 ntAPPRIS P1 TSL 5 BASIC4.21□□□□□ -1.73
APOBEC1P41238 MAP3K19-201ENST00000358371 3719 ntTSL 1 (best) BASIC4.21□□□□□ -1.73
APOBEC1P41238 CSPP1-203ENST00000519668 3715 ntAPPRIS ALT2 TSL 1 (best) BASIC4.21□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 79.7 ms