Protein–RNA interactions for Protein: P31415

CASQ1, Calsequestrin-1, humanhuman

Predictions only

Length 396 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASQ1P31415 BLM-208ENST00000560509 3966 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
CASQ1P31415 AC006042.3-201ENST00000454684 1469 ntBASIC4.24□□□□□ -1.73
CASQ1P31415 LBR-202ENST00000338179 3812 ntAPPRIS P1 TSL 5 BASIC4.23□□□□□ -1.73
CASQ1P31415 TUG1-201ENST00000519077 5673 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
CASQ1P31415 SPRR2D-203ENST00000368757 800 ntAPPRIS P1 TSL 3 BASIC4.23□□□□□ -1.73
CASQ1P31415 UBE2U-201ENST00000371076 1136 ntAPPRIS P2 TSL 1 (best) BASIC4.23□□□□□ -1.73
CASQ1P31415 RPS27AP11-201ENST00000402798 447 ntBASIC4.23□□□□□ -1.73
CASQ1P31415 RPL7AP73-201ENST00000413490 353 ntBASIC4.23□□□□□ -1.73
CASQ1P31415 XKRYP4-201ENST00000414395 483 ntBASIC4.23□□□□□ -1.73
CASQ1P31415 RPL12P3-201ENST00000440080 396 ntBASIC4.23□□□□□ -1.73
CASQ1P31415 TXNP1-201ENST00000441872 371 ntBASIC4.23□□□□□ -1.73
CASQ1P31415 AL161621.1-201ENST00000444796 340 ntTSL 3 BASIC4.23□□□□□ -1.73
CASQ1P31415 XKRYP5-201ENST00000449659 483 ntBASIC4.23□□□□□ -1.73
CASQ1P31415 AC005871.1-201ENST00000450247 475 ntTSL 3 BASIC4.23□□□□□ -1.73
CASQ1P31415 AC092691.2-201ENST00000461787 803 ntBASIC4.23□□□□□ -1.73
CASQ1P31415 RN7SL98P-201ENST00000462271 300 ntBASIC4.23□□□□□ -1.73
CASQ1P31415 RPS3AP41-201ENST00000462701 778 ntBASIC4.23□□□□□ -1.73
CASQ1P31415 DCUN1D1-204ENST00000469954 970 ntTSL 3 BASIC4.23□□□□□ -1.73
CASQ1P31415 TRBV12-2-201ENST00000489763 344 ntBASIC4.23□□□□□ -1.73
CASQ1P31415 RPL35P6-201ENST00000490024 372 ntBASIC4.23□□□□□ -1.73
CASQ1P31415 RN7SL691P-201ENST00000494487 301 ntBASIC4.23□□□□□ -1.73
CASQ1P31415 LINC01181-201ENST00000503718 556 ntTSL 4 BASIC4.23□□□□□ -1.73
CASQ1P31415 AC113404.3-201ENST00000506621 555 ntTSL 5 BASIC4.23□□□□□ -1.73
CASQ1P31415 AC021146.7-201ENST00000509604 775 ntBASIC4.23□□□□□ -1.73
CASQ1P31415 AC099520.1-208ENST00000518276 472 ntTSL 3 BASIC4.23□□□□□ -1.73
CASQ1P31415 AC007688.2-201ENST00000545158 369 ntTSL 3 BASIC4.23□□□□□ -1.73
CASQ1P31415 PCNPP1-201ENST00000552501 511 ntBASIC4.23□□□□□ -1.73
CASQ1P31415 LINC02168-201ENST00000565327 352 ntTSL 2 BASIC4.23□□□□□ -1.73
CASQ1P31415 AC142086.4-201ENST00000568904 650 ntTSL 3 BASIC4.23□□□□□ -1.73
CASQ1P31415 MTND4LP24-201ENST00000572277 291 ntBASIC4.23□□□□□ -1.73
CASQ1P31415 AC005899.4-201ENST00000581915 514 ntTSL 4 BASIC4.23□□□□□ -1.73
CASQ1P31415 AC025682.1-201ENST00000582389 437 ntTSL 5 BASIC4.23□□□□□ -1.73
CASQ1P31415 AC011468.4-201ENST00000603942 409 ntBASIC4.23□□□□□ -1.73
CASQ1P31415 AL390816.3-201ENST00000604527 1066 ntBASIC4.23□□□□□ -1.73
CASQ1P31415 AC113194.1-201ENST00000606037 500 ntBASIC4.23□□□□□ -1.73
CASQ1P31415 LINC00458-206ENST00000607494 849 ntTSL 3 BASIC4.23□□□□□ -1.73
CASQ1P31415 AC092653.1-201ENST00000608509 531 ntBASIC4.23□□□□□ -1.73
CASQ1P31415 RMST_8.1-201ENST00000610287 165 ntBASIC4.23□□□□□ -1.73
CASQ1P31415 RNVU1-4-201ENST00000612985 164 ntBASIC4.23□□□□□ -1.73
CASQ1P31415 5S_rRNA.12-201ENST00000617631 107 ntBASIC4.23□□□□□ -1.73
CASQ1P31415 AL139089.1-201ENST00000620372 975 ntBASIC4.23□□□□□ -1.73
CASQ1P31415 AC019080.5-201ENST00000624891 757 ntBASIC4.23□□□□□ -1.73
CASQ1P31415 CAPS2-206ENST00000409799 1859 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
CASQ1P31415 USH2A-202ENST00000366942 6320 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
CASQ1P31415 LINC01094-203ENST00000504675 1985 ntTSL 2 BASIC4.23□□□□□ -1.73
CASQ1P31415 LRRN3-203ENST00000422987 3513 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
CASQ1P31415 AC024560.2-201ENST00000507981 1497 ntBASIC4.23□□□□□ -1.73
CASQ1P31415 FAM91A3P-201ENST00000456826 2544 ntBASIC4.23□□□□□ -1.73
CASQ1P31415 RNF111-206ENST00000559209 5278 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
CASQ1P31415 CEP170P1-201ENST00000502249 4587 ntBASIC4.22□□□□□ -1.73
CASQ1P31415 EPS15-202ENST00000371730 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC4.22□□□□□ -1.73
CASQ1P31415 AL353746.1-201ENST00000566293 6881 ntBASIC4.22□□□□□ -1.73
CASQ1P31415 WFDC6-202ENST00000372670 620 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
CASQ1P31415 PMS1-202ENST00000374826 948 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
CASQ1P31415 MIR184-201ENST00000384962 84 ntBASIC4.22□□□□□ -1.73
CASQ1P31415 AP000567.1-201ENST00000406413 156 ntBASIC4.22□□□□□ -1.73
CASQ1P31415 RN7SKP182-201ENST00000410772 298 ntBASIC4.22□□□□□ -1.73
CASQ1P31415 LINC00161-201ENST00000412526 870 ntTSL 2 BASIC4.22□□□□□ -1.73
CASQ1P31415 LINC00266-4P-201ENST00000427373 842 ntTSL 3 BASIC4.22□□□□□ -1.73
CASQ1P31415 AC093581.1-202ENST00000430890 391 ntTSL 2 BASIC4.22□□□□□ -1.73
CASQ1P31415 ISM1-AS1-201ENST00000431407 652 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
CASQ1P31415 MTCO1P45-201ENST00000431457 267 ntBASIC4.22□□□□□ -1.73
CASQ1P31415 NEK4P1-201ENST00000433383 879 ntBASIC4.22□□□□□ -1.73
CASQ1P31415 RPS17P13-201ENST00000448974 407 ntBASIC4.22□□□□□ -1.73
CASQ1P31415 AL442647.1-201ENST00000449485 481 ntTSL 5 BASIC4.22□□□□□ -1.73
CASQ1P31415 AC098824.1-201ENST00000453565 980 ntBASIC4.22□□□□□ -1.73
CASQ1P31415 C1GALT1C1L-201ENST00000475092 1172 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
CASQ1P31415 AL035404.1-201ENST00000497982 568 ntBASIC4.22□□□□□ -1.73
CASQ1P31415 AC090071.1-201ENST00000507713 644 ntBASIC4.22□□□□□ -1.73
CASQ1P31415 AC016550.2-202ENST00000511940 581 ntTSL 2 BASIC4.22□□□□□ -1.73
CASQ1P31415 EGFLAM-AS2-201ENST00000512603 466 ntTSL 5 BASIC4.22□□□□□ -1.73
CASQ1P31415 EGFLAM-AS2-202ENST00000514377 539 ntTSL 3 BASIC4.22□□□□□ -1.73
CASQ1P31415 TRAV8-5-201ENST00000537369 341 ntBASIC4.22□□□□□ -1.73
CASQ1P31415 SOX5-AS1-201ENST00000539583 573 ntTSL 4 BASIC4.22□□□□□ -1.73
CASQ1P31415 AC073651.3-201ENST00000545999 417 ntTSL 3 BASIC4.22□□□□□ -1.73
CASQ1P31415 AC012464.2-201ENST00000551257 779 ntTSL 5 BASIC4.22□□□□□ -1.73
CASQ1P31415 AC090888.3-201ENST00000558917 509 ntBASIC4.22□□□□□ -1.73
CASQ1P31415 ALDH3A2-208ENST00000571163 590 ntTSL 5 BASIC4.22□□□□□ -1.73
CASQ1P31415 AC006946.3-201ENST00000609791 756 ntBASIC4.22□□□□□ -1.73
CASQ1P31415 PCDH15-208ENST00000395432 6901 ntTSL 5 BASIC4.22□□□□□ -1.73
CASQ1P31415 PAN3-202ENST00000399613 4940 ntAPPRIS ALT2 TSL 5 BASIC4.22□□□□□ -1.73
CASQ1P31415 NDST4-201ENST00000264363 3351 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
CASQ1P31415 OR11H4-202ENST00000641082 1585 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
CASQ1P31415 ZNF92-204ENST00000450302 2957 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
CASQ1P31415 SERPINI2-201ENST00000264677 1678 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
CASQ1P31415 ADGRG4-203ENST00000394143 9931 ntAPPRIS P2 TSL 1 (best) BASIC4.21□□□□□ -1.73
CASQ1P31415 FAM126B-202ENST00000418596 9333 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
CASQ1P31415 LYST-201ENST00000389793 13480 ntAPPRIS P1 TSL 5 BASIC4.21□□□□□ -1.74
CASQ1P31415 FGD4-213ENST00000546442 3503 ntTSL 5 BASIC4.21□□□□□ -1.74
CASQ1P31415 TAS2R9-201ENST00000240691 1075 ntAPPRIS P1 BASIC4.21□□□□□ -1.74
CASQ1P31415 OR4K15-201ENST00000305051 1216 ntBASIC4.21□□□□□ -1.74
CASQ1P31415 GLIPR1L1-201ENST00000312442 1132 ntAPPRIS P3 TSL 1 (best) BASIC4.21□□□□□ -1.74
CASQ1P31415 LINC02337-201ENST00000401043 374 ntTSL 3 BASIC4.21□□□□□ -1.74
CASQ1P31415 ST13P16-201ENST00000401760 781 ntBASIC4.21□□□□□ -1.74
CASQ1P31415 AL109941.1-201ENST00000401925 229 ntBASIC4.21□□□□□ -1.74
CASQ1P31415 MTCO3P31-201ENST00000405526 789 ntBASIC4.21□□□□□ -1.74
CASQ1P31415 RN7SKP285-201ENST00000410137 318 ntBASIC4.21□□□□□ -1.74
CASQ1P31415 AL133343.3-201ENST00000413983 469 ntTSL 2 BASIC4.21□□□□□ -1.74
CASQ1P31415 MTND2P16-201ENST00000419987 799 ntBASIC4.21□□□□□ -1.74
CASQ1P31415 RPEP3-201ENST00000425462 676 ntBASIC4.21□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 111.8 ms