Protein–RNA interactions for Protein: P30622

CLIP1, CAP-Gly domain-containing linker protein 1, humanhuman

Predictions only

Length 1,438 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1P30622 AC034223.2-201ENST00000511840 425 ntTSL 3 BASIC5.7□□□□□ -1.5
CLIP1P30622 AP006245.1-201ENST00000522549 120 ntBASIC5.7□□□□□ -1.5
CLIP1P30622 AC025437.3-201ENST00000523178 771 ntTSL 5 BASIC5.7□□□□□ -1.5
CLIP1P30622 AL360157.1-201ENST00000565962 87 ntBASIC5.7□□□□□ -1.5
CLIP1P30622 APAF1-208ENST00000549007 3492 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
CLIP1P30622 CYYR1-AS1-201ENST00000357401 3412 ntTSL 2 BASIC5.7□□□□□ -1.5
CLIP1P30622 AC011912.1-201ENST00000623483 5819 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
CLIP1P30622 ADGRL2-207ENST00000370723 5254 ntTSL 5 BASIC5.7□□□□□ -1.5
CLIP1P30622 ADGRL2-208ENST00000370725 5293 ntAPPRIS ALT2 TSL 5 BASIC5.7□□□□□ -1.5
CLIP1P30622 TET2-203ENST00000380013 9679 ntAPPRIS P2 TSL 5 BASIC5.7□□□□□ -1.5
CLIP1P30622 AC093849.1-201ENST00000563631 2209 ntBASIC5.7□□□□□ -1.5
CLIP1P30622 GHR-208ENST00000612382 4699 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
CLIP1P30622 CD80-201ENST00000264246 2725 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
CLIP1P30622 KPNA2P2-201ENST00000419546 1489 ntBASIC5.69□□□□□ -1.5
CLIP1P30622 KBTBD3-207ENST00000534815 3396 ntTSL 5 BASIC5.69□□□□□ -1.5
CLIP1P30622 IL18R1-202ENST00000334376 537 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
CLIP1P30622 RNU1-18P-201ENST00000363062 164 ntBASIC5.69□□□□□ -1.5
CLIP1P30622 RNA5SP42-201ENST00000364278 115 ntBASIC5.69□□□□□ -1.5
CLIP1P30622 AC097717.1-228ENST00000417006 754 ntTSL 3 BASIC5.69□□□□□ -1.5
CLIP1P30622 LINC01757-201ENST00000435552 480 ntTSL 2 BASIC5.69□□□□□ -1.5
CLIP1P30622 AC115115.1-201ENST00000449927 248 ntBASIC5.69□□□□□ -1.5
CLIP1P30622 LINC02110-201ENST00000503870 546 ntTSL 3 BASIC5.69□□□□□ -1.5
CLIP1P30622 LINC02374-202ENST00000515222 578 ntTSL 4 BASIC5.69□□□□□ -1.5
CLIP1P30622 AP000442.2-202ENST00000531311 601 ntTSL 3 BASIC5.69□□□□□ -1.5
CLIP1P30622 GYPA-211ENST00000535709 695 ntAPPRIS ALT2 TSL 1 (best) BASIC5.69□□□□□ -1.5
CLIP1P30622 DEFB109F-202ENST00000542600 509 ntTSL 2 BASIC5.69□□□□□ -1.5
CLIP1P30622 TIMM9-206ENST00000555593 796 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
CLIP1P30622 ADPRM-204ENST00000609540 1138 ntTSL 5 BASIC5.69□□□□□ -1.5
CLIP1P30622 AP001002.2-201ENST00000625137 386 ntBASIC5.69□□□□□ -1.5
CLIP1P30622 TEX41-265ENST00000627785 704 ntTSL 5 BASIC5.69□□□□□ -1.5
CLIP1P30622 TEX41-280ENST00000629185 591 ntTSL 5 BASIC5.69□□□□□ -1.5
CLIP1P30622 PKN2-AS1-202ENST00000458097 3542 ntTSL 2 BASIC5.69□□□□□ -1.5
CLIP1P30622 AC087190.4-201ENST00000574616 8334 ntBASIC5.69□□□□□ -1.5
CLIP1P30622 AL589745.1-201ENST00000421190 3336 ntTSL 5 BASIC5.68□□□□□ -1.5
CLIP1P30622 OR4K13-201ENST00000315693 915 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
CLIP1P30622 OR10A7-201ENST00000326258 951 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
CLIP1P30622 RNU4-35P-201ENST00000362588 141 ntBASIC5.68□□□□□ -1.5
CLIP1P30622 AC003035.1-201ENST00000391359 544 ntTSL 3 BASIC5.68□□□□□ -1.5
CLIP1P30622 EIF4EBP2P3-201ENST00000403144 334 ntBASIC5.68□□□□□ -1.5
CLIP1P30622 HSPE1P8-201ENST00000406997 288 ntBASIC5.68□□□□□ -1.5
CLIP1P30622 AL591503.2-201ENST00000442314 1005 ntBASIC5.68□□□□□ -1.5
CLIP1P30622 NUDT6-203ENST00000502270 678 ntTSL 5 BASIC5.68□□□□□ -1.5
CLIP1P30622 FTH1P24-201ENST00000503502 462 ntBASIC5.68□□□□□ -1.5
CLIP1P30622 CXCL11-202ENST00000503860 767 ntAPPRIS P1 TSL 3 BASIC5.68□□□□□ -1.5
CLIP1P30622 AP000786.1-201ENST00000541092 581 ntTSL 4 BASIC5.68□□□□□ -1.5
CLIP1P30622 RPL21P12-201ENST00000559810 515 ntBASIC5.68□□□□□ -1.5
CLIP1P30622 AC006116.10-201ENST00000591836 581 ntBASIC5.68□□□□□ -1.5
CLIP1P30622 AC018816.2-201ENST00000621460 353 ntBASIC5.68□□□□□ -1.5
CLIP1P30622 U4.6-201ENST00000621618 127 ntBASIC5.68□□□□□ -1.5
CLIP1P30622 TTN-AS1-267ENST00000628826 662 ntTSL 5 BASIC5.68□□□□□ -1.5
CLIP1P30622 OR2L3-201ENST00000359959 2792 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
CLIP1P30622 TCP11X1-203ENST00000623912 1715 ntTSL 5 BASIC5.68□□□□□ -1.5
CLIP1P30622 UFM1-201ENST00000239878 3138 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
CLIP1P30622 MTUS1-216ENST00000519263 4089 ntTSL 2 BASIC5.68□□□□□ -1.5
CLIP1P30622 SUPT3H-202ENST00000371459 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC5.67□□□□□ -1.5
CLIP1P30622 AC058791.1-201ENST00000608412 3198 ntBASIC5.67□□□□□ -1.5
CLIP1P30622 POLK-210ENST00000508526 2019 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
CLIP1P30622 OR5K4-201ENST00000354924 966 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
CLIP1P30622 RNU6-283P-201ENST00000364788 107 ntBASIC5.67□□□□□ -1.5
CLIP1P30622 U3.39-201ENST00000408569 239 ntBASIC5.67□□□□□ -1.5
CLIP1P30622 AC005019.1-201ENST00000436455 431 ntBASIC5.67□□□□□ -1.5
CLIP1P30622 NPM1P39-201ENST00000449818 867 ntBASIC5.67□□□□□ -1.5
CLIP1P30622 BX510359.1-201ENST00000456973 237 ntBASIC5.67□□□□□ -1.5
CLIP1P30622 AC114741.1-201ENST00000504357 464 ntTSL 2 BASIC5.67□□□□□ -1.5
CLIP1P30622 AP000889.1-201ENST00000530968 660 ntBASIC5.67□□□□□ -1.5
CLIP1P30622 AC084838.1-201ENST00000532973 312 ntTSL 3 BASIC5.67□□□□□ -1.5
CLIP1P30622 AC078962.4-201ENST00000546135 254 ntTSL 3 BASIC5.67□□□□□ -1.5
CLIP1P30622 AC098617.1-215ENST00000594798 1152 ntTSL 5 BASIC5.67□□□□□ -1.5
CLIP1P30622 AC006077.1-201ENST00000604746 343 ntBASIC5.67□□□□□ -1.5
CLIP1P30622 MIR4727-201ENST00000622232 55 ntBASIC5.67□□□□□ -1.5
CLIP1P30622 ABBA01000935.2-201ENST00000637477 838 ntBASIC5.67□□□□□ -1.5
CLIP1P30622 MTRNR2L11-201ENST00000604646 1552 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
CLIP1P30622 RIMS1-206ENST00000425662 2799 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
CLIP1P30622 GPRC6A-203ENST00000530250 2310 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
CLIP1P30622 MBD5-202ENST00000407073 9512 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
CLIP1P30622 SNORD17-201ENST00000390930 237 ntBASIC5.66□□□□□ -1.5
CLIP1P30622 AL138749.1-201ENST00000397864 791 ntTSL 5 BASIC5.66□□□□□ -1.5
CLIP1P30622 AC096664.2-201ENST00000411843 406 ntBASIC5.66□□□□□ -1.5
CLIP1P30622 AC073071.1-201ENST00000412410 388 ntTSL 3 BASIC5.66□□□□□ -1.5
CLIP1P30622 MIRLET7DHG-201ENST00000416309 1294 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
CLIP1P30622 NPM1P17-201ENST00000479221 602 ntBASIC5.66□□□□□ -1.5
CLIP1P30622 AC104619.2-201ENST00000514293 646 ntTSL 3 BASIC5.66□□□□□ -1.5
CLIP1P30622 MS4A4E-206ENST00000528394 555 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
CLIP1P30622 AC020661.4-201ENST00000561388 500 ntTSL 3 BASIC5.66□□□□□ -1.5
CLIP1P30622 AC138305.2-201ENST00000561595 556 ntTSL 4 BASIC5.66□□□□□ -1.5
CLIP1P30622 AC233280.2-201ENST00000603917 1070 ntBASIC5.66□□□□□ -1.5
CLIP1P30622 AC115621.1-201ENST00000604653 858 ntBASIC5.66□□□□□ -1.5
CLIP1P30622 MIR8058-201ENST00000615737 89 ntBASIC5.66□□□□□ -1.5
CLIP1P30622 PRKAA2-202ENST00000610361 9280 ntAPPRIS ALT1 TSL 5 BASIC5.66□□□□□ -1.5
CLIP1P30622 CRB1-201ENST00000367397 9023 ntTSL 2 BASIC5.66□□□□□ -1.5
CLIP1P30622 YWHAZ-211ENST00000457309 3007 ntAPPRIS P1 TSL 2 BASIC5.66□□□□□ -1.5
CLIP1P30622 OBSCN-214ENST00000636875 23907 ntTSL 5 BASIC5.66□□□□□ -1.5
CLIP1P30622 PALMD-203ENST00000605497 1942 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
CLIP1P30622 USP8P1-201ENST00000494673 3183 ntBASIC5.66□□□□□ -1.5
CLIP1P30622 KIAA0825-203ENST00000513200 4942 ntTSL 5 BASIC5.66□□□□□ -1.5
CLIP1P30622 AC005326.1-201ENST00000429197 123 ntBASIC5.65□□□□□ -1.5
CLIP1P30622 U3.44-201ENST00000458938 192 ntBASIC5.65□□□□□ -1.5
CLIP1P30622 AC084357.1-201ENST00000473404 255 ntBASIC5.65□□□□□ -1.5
CLIP1P30622 AC027613.1-201ENST00000508414 457 ntTSL 3 BASIC5.65□□□□□ -1.5
CLIP1P30622 LINC02112-202ENST00000512976 464 ntTSL 3 BASIC5.65□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 74.7 ms