Protein–RNA interactions for Protein: P29350

PTPN6, Tyrosine-protein phosphatase non-receptor type 6, humanhuman

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6P29350 RNU6-796P-201ENST00000391086 107 ntBASIC4.06□□□□□ -1.76
PTPN6P29350 HMGB3P18-201ENST00000406327 590 ntBASIC4.06□□□□□ -1.76
PTPN6P29350 MTATP6P31-201ENST00000406985 692 ntBASIC4.06□□□□□ -1.76
PTPN6P29350 RN7SKP177-201ENST00000410567 355 ntBASIC4.06□□□□□ -1.76
PTPN6P29350 USP9YP19-201ENST00000412165 485 ntBASIC4.06□□□□□ -1.76
PTPN6P29350 PRELID3BP11-201ENST00000414230 479 ntBASIC4.06□□□□□ -1.76
PTPN6P29350 AL592293.2-201ENST00000422292 996 ntBASIC4.06□□□□□ -1.76
PTPN6P29350 AC068599.1-201ENST00000422558 567 ntTSL 4 BASIC4.06□□□□□ -1.76
PTPN6P29350 UTS2B-203ENST00000427544 676 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
PTPN6P29350 FKBP7-205ENST00000434643 666 ntAPPRIS ALT2 TSL 1 (best) BASIC4.06□□□□□ -1.76
PTPN6P29350 AC074367.1-201ENST00000438685 1125 ntBASIC4.06□□□□□ -1.76
PTPN6P29350 ELOCP8-201ENST00000439309 332 ntBASIC4.06□□□□□ -1.76
PTPN6P29350 DIAPH2-AS1-201ENST00000439759 971 ntTSL 3 BASIC4.06□□□□□ -1.76
PTPN6P29350 ELOCP15-201ENST00000442090 332 ntBASIC4.06□□□□□ -1.76
PTPN6P29350 LINC00704-202ENST00000443994 418 ntTSL 2 BASIC4.06□□□□□ -1.76
PTPN6P29350 AC007099.2-201ENST00000444852 336 ntTSL 5 BASIC4.06□□□□□ -1.76
PTPN6P29350 RPL23AP24-201ENST00000458203 385 ntBASIC4.06□□□□□ -1.76
PTPN6P29350 AC096992.1-201ENST00000459808 709 ntBASIC4.06□□□□□ -1.76
PTPN6P29350 RPS23P7-201ENST00000466210 444 ntBASIC4.06□□□□□ -1.76
PTPN6P29350 RN7SL585P-201ENST00000470538 280 ntBASIC4.06□□□□□ -1.76
PTPN6P29350 RN7SL812P-201ENST00000493791 279 ntBASIC4.06□□□□□ -1.76
PTPN6P29350 AC008591.1-201ENST00000503616 631 ntTSL 3 BASIC4.06□□□□□ -1.76
PTPN6P29350 PDLIM1P4-201ENST00000504327 1006 ntBASIC4.06□□□□□ -1.76
PTPN6P29350 VWA8P1-201ENST00000510889 176 ntBASIC4.06□□□□□ -1.76
PTPN6P29350 AC133963.2-201ENST00000513686 578 ntBASIC4.06□□□□□ -1.76
PTPN6P29350 RFESD-208ENST00000513950 464 ntTSL 5 BASIC4.06□□□□□ -1.76
PTPN6P29350 IGLVIV-66-1-201ENST00000521832 460 ntBASIC4.06□□□□□ -1.76
PTPN6P29350 LINC02258-201ENST00000551280 777 ntTSL 2 BASIC4.06□□□□□ -1.76
PTPN6P29350 AC074029.1-201ENST00000552531 1044 ntBASIC4.06□□□□□ -1.76
PTPN6P29350 AC007424.1-205ENST00000552615 579 ntTSL 4 BASIC4.06□□□□□ -1.76
PTPN6P29350 AL590235.2-201ENST00000602641 632 ntTSL 5 BASIC4.06□□□□□ -1.76
PTPN6P29350 LLPHP1-201ENST00000603571 367 ntBASIC4.06□□□□□ -1.76
PTPN6P29350 HSPE1-MOB4-201ENST00000604458 890 ntAPPRIS P1 TSL 3 BASIC4.06□□□□□ -1.76
PTPN6P29350 LRRC2-AS1-202ENST00000614743 633 ntTSL 3 BASIC4.06□□□□□ -1.76
PTPN6P29350 AC083809.1-201ENST00000615051 472 ntBASIC4.06□□□□□ -1.76
PTPN6P29350 MIR6758-201ENST00000620653 63 ntBASIC4.06□□□□□ -1.76
PTPN6P29350 AC004943.1-201ENST00000620814 561 ntTSL 5 BASIC4.06□□□□□ -1.76
PTPN6P29350 GPR34-203ENST00000620846 1282 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
PTPN6P29350 KIAA1524-208ENST00000625495 147 ntTSL 5 BASIC4.06□□□□□ -1.76
PTPN6P29350 UBE4A-201ENST00000252108 6103 ntAPPRIS ALT1 TSL 1 (best) BASIC4.06□□□□□ -1.76
PTPN6P29350 OTOGL-202ENST00000458043 8083 ntAPPRIS P5 TSL 5 BASIC4.06□□□□□ -1.76
PTPN6P29350 FAM133A-201ENST00000322139 3292 ntAPPRIS P1 TSL 4 BASIC4.06□□□□□ -1.76
PTPN6P29350 PLEKHG7-203ENST00000638590 3267 ntAPPRIS P1 TSL 2 BASIC4.06□□□□□ -1.76
PTPN6P29350 HEATR5B-201ENST00000233099 6905 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
PTPN6P29350 ENPP3-202ENST00000358229 3026 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
PTPN6P29350 ITCH-202ENST00000374864 6401 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
PTPN6P29350 CYP3A7-201ENST00000336374 1971 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
PTPN6P29350 DTWD2-201ENST00000304058 4365 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
PTPN6P29350 SELENOI-201ENST00000260585 8101 ntAPPRIS P2 TSL 1 (best) BASIC4.05□□□□□ -1.76
PTPN6P29350 RNU6-792P-201ENST00000363490 107 ntBASIC4.05□□□□□ -1.76
PTPN6P29350 RNA5SP509-201ENST00000364577 119 ntBASIC4.05□□□□□ -1.76
PTPN6P29350 ATF1P1-201ENST00000406040 927 ntBASIC4.05□□□□□ -1.76
PTPN6P29350 AC098872.1-201ENST00000413304 543 ntTSL 3 BASIC4.05□□□□□ -1.76
PTPN6P29350 LINC01198-201ENST00000416521 500 ntTSL 3 BASIC4.05□□□□□ -1.76
PTPN6P29350 DAB1-AS1-201ENST00000416598 1262 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
PTPN6P29350 P2RY10P2-201ENST00000416730 913 ntBASIC4.05□□□□□ -1.76
PTPN6P29350 MYCBP2-AS1-201ENST00000422231 519 ntTSL 3 BASIC4.05□□□□□ -1.76
PTPN6P29350 AC015971.1-204ENST00000424788 1147 ntTSL 5 BASIC4.05□□□□□ -1.76
PTPN6P29350 AL139824.1-201ENST00000431983 453 ntTSL 3 BASIC4.05□□□□□ -1.76
PTPN6P29350 ELOCP18-201ENST00000434209 337 ntBASIC4.05□□□□□ -1.76
PTPN6P29350 AC008278.2-201ENST00000438178 409 ntTSL 3 BASIC4.05□□□□□ -1.76
PTPN6P29350 PPIAP3-201ENST00000450588 505 ntBASIC4.05□□□□□ -1.76
PTPN6P29350 AC011276.1-201ENST00000469688 323 ntBASIC4.05□□□□□ -1.76
PTPN6P29350 AC006517.1-201ENST00000480485 328 ntBASIC4.05□□□□□ -1.76
PTPN6P29350 AC025445.1-201ENST00000502728 300 ntBASIC4.05□□□□□ -1.76
PTPN6P29350 PGRMC2-203ENST00000503588 818 ntTSL 4 BASIC4.05□□□□□ -1.76
PTPN6P29350 AC083923.2-202ENST00000517773 498 ntTSL 3 BASIC4.05□□□□□ -1.76
PTPN6P29350 AC008562.1-201ENST00000521763 330 ntBASIC4.05□□□□□ -1.76
PTPN6P29350 AF181450.1-201ENST00000522980 410 ntTSL 3 BASIC4.05□□□□□ -1.76
PTPN6P29350 AC009509.2-201ENST00000538640 429 ntTSL 2 BASIC4.05□□□□□ -1.76
PTPN6P29350 CACNA1C-IT2-201ENST00000541871 589 ntTSL 2 BASIC4.05□□□□□ -1.76
PTPN6P29350 LINC01479-202ENST00000546170 444 ntTSL 2 BASIC4.05□□□□□ -1.76
PTPN6P29350 AC130462.1-201ENST00000548144 549 ntTSL 5 BASIC4.05□□□□□ -1.76
PTPN6P29350 TMEM106C-220ENST00000552561 810 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
PTPN6P29350 NUFIP2-202ENST00000579665 559 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
PTPN6P29350 PSMD5-AS1-203ENST00000589026 525 ntTSL 5 BASIC4.05□□□□□ -1.76
PTPN6P29350 AC069304.3-201ENST00000603938 1084 ntBASIC4.05□□□□□ -1.76
PTPN6P29350 AC012603.1-201ENST00000606424 528 ntBASIC4.05□□□□□ -1.76
PTPN6P29350 AC004825.2-201ENST00000616634 455 ntBASIC4.05□□□□□ -1.76
PTPN6P29350 MIR6864-201ENST00000617935 70 ntBASIC4.05□□□□□ -1.76
PTPN6P29350 LINC01002-227ENST00000633363 541 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
PTPN6P29350 AL589740.1-205ENST00000635561 565 ntTSL 5 BASIC4.05□□□□□ -1.76
PTPN6P29350 U6.107-201ENST00000637108 79 ntBASIC4.05□□□□□ -1.76
PTPN6P29350 AC008013.2-202ENST00000637965 364 ntBASIC4.05□□□□□ -1.76
PTPN6P29350 LINC01247-201ENST00000448901 4209 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
PTPN6P29350 CENPF-201ENST00000366955 10307 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
PTPN6P29350 AC097504.1-201ENST00000515103 2415 ntBASIC4.05□□□□□ -1.76
PTPN6P29350 MS4A14-203ENST00000395005 2813 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
PTPN6P29350 OR10D3-203ENST00000641546 3566 ntAPPRIS P1 BASIC4.05□□□□□ -1.76
PTPN6P29350 DMXL2-202ENST00000449909 7465 ntAPPRIS ALT2 TSL 1 (best) BASIC4.04□□□□□ -1.76
PTPN6P29350 IQCH-206ENST00000546225 3112 ntTSL 5 BASIC4.04□□□□□ -1.76
PTPN6P29350 AP1G1-207ENST00000564155 2723 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
PTPN6P29350 POLK-201ENST00000241436 5911 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
PTPN6P29350 LGALS13-201ENST00000221797 602 ntAPPRIS P2 TSL 1 (best) BASIC4.04□□□□□ -1.76
PTPN6P29350 OR5P1P-201ENST00000299512 925 ntBASIC4.04□□□□□ -1.76
PTPN6P29350 CFHR1-202ENST00000367424 1070 ntTSL 5 BASIC4.04□□□□□ -1.76
PTPN6P29350 OR52E6-202ENST00000379946 954 ntBASIC4.04□□□□□ -1.76
PTPN6P29350 LAP3P1-201ENST00000403648 294 ntBASIC4.04□□□□□ -1.76
PTPN6P29350 RNU4-25P-201ENST00000410569 230 ntBASIC4.04□□□□□ -1.76
PTPN6P29350 RNA5SP104-201ENST00000410989 118 ntBASIC4.04□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 106.8 ms