Protein–RNA interactions for Protein: P28288

ABCD3, ATP-binding cassette sub-family D member 3, humanhuman

Predictions only

Length 659 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD3P28288 AC009478.1-201ENST00000429816 562 ntTSL 3 BASIC4.53□□□□□ -1.68
ABCD3P28288 AC116035.1-201ENST00000431057 517 ntTSL 3 BASIC4.53□□□□□ -1.68
ABCD3P28288 AL359878.2-201ENST00000435531 407 ntTSL 3 BASIC4.53□□□□□ -1.68
ABCD3P28288 RPL23AP16-201ENST00000441715 421 ntBASIC4.53□□□□□ -1.68
ABCD3P28288 RPL23AP76-201ENST00000441860 458 ntBASIC4.53□□□□□ -1.68
ABCD3P28288 AL732323.1-201ENST00000445897 456 ntTSL 3 BASIC4.53□□□□□ -1.68
ABCD3P28288 AC004022.1-201ENST00000447766 1066 ntBASIC4.53□□□□□ -1.68
ABCD3P28288 MTCO1P48-201ENST00000448024 1096 ntBASIC4.53□□□□□ -1.68
ABCD3P28288 RPL37P6-202ENST00000464216 403 ntBASIC4.53□□□□□ -1.68
ABCD3P28288 AL035454.1-201ENST00000470758 433 ntTSL 3 BASIC4.53□□□□□ -1.68
ABCD3P28288 PDLIM1P4-201ENST00000504327 1006 ntBASIC4.53□□□□□ -1.68
ABCD3P28288 UBE2Q2P10-201ENST00000514854 900 ntBASIC4.53□□□□□ -1.68
ABCD3P28288 PTH-202ENST00000529816 799 ntAPPRIS P1 TSL 5 BASIC4.53□□□□□ -1.68
ABCD3P28288 AC021006.3-201ENST00000530771 192 ntBASIC4.53□□□□□ -1.68
ABCD3P28288 MTCO2P15-201ENST00000532655 656 ntBASIC4.53□□□□□ -1.68
ABCD3P28288 C8orf59-206ENST00000545322 491 ntTSL 3 BASIC4.53□□□□□ -1.68
ABCD3P28288 AC009803.2-201ENST00000550378 665 ntTSL 5 BASIC4.53□□□□□ -1.68
ABCD3P28288 HMGB3P26-201ENST00000560051 582 ntBASIC4.53□□□□□ -1.68
ABCD3P28288 AC142086.4-201ENST00000568904 650 ntTSL 3 BASIC4.53□□□□□ -1.68
ABCD3P28288 RN7SL802P-201ENST00000577858 299 ntBASIC4.53□□□□□ -1.68
ABCD3P28288 AC069366.1-201ENST00000583159 838 ntBASIC4.53□□□□□ -1.68
ABCD3P28288 SNORD39.3-201ENST00000584451 71 ntBASIC4.53□□□□□ -1.68
ABCD3P28288 AL109935.2-201ENST00000587737 395 ntTSL 5 BASIC4.53□□□□□ -1.68
ABCD3P28288 HMGB2P1-201ENST00000591146 634 ntBASIC4.53□□□□□ -1.68
ABCD3P28288 LINC00649-204ENST00000593977 640 ntTSL 5 BASIC4.53□□□□□ -1.68
ABCD3P28288 CEACAM7-204ENST00000602225 524 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
ABCD3P28288 PRKCQ-AS1-207ENST00000607996 531 ntTSL 5 BASIC4.53□□□□□ -1.68
ABCD3P28288 AC099669.2-201ENST00000616549 437 ntBASIC4.53□□□□□ -1.68
ABCD3P28288 AC073348.1-201ENST00000623002 331 ntBASIC4.53□□□□□ -1.68
ABCD3P28288 AC015871.5-202ENST00000623252 701 ntBASIC4.53□□□□□ -1.68
ABCD3P28288 AF001550.2-201ENST00000636643 217 ntBASIC4.53□□□□□ -1.68
ABCD3P28288 SPART-201ENST00000355182 4820 ntAPPRIS P1 TSL 5 BASIC4.53□□□□□ -1.68
ABCD3P28288 GRIK2-201ENST00000318991 4317 ntTSL 5 BASIC4.53□□□□□ -1.68
ABCD3P28288 ZNF560-201ENST00000301480 2654 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
ABCD3P28288 AC106895.2-201ENST00000511291 1824 ntTSL 3 BASIC4.53□□□□□ -1.68
ABCD3P28288 BCLAF1-202ENST00000392348 2610 ntTSL 5 BASIC4.53□□□□□ -1.68
ABCD3P28288 YWHAZ-201ENST00000353245 2829 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
ABCD3P28288 RACGAP1-202ENST00000427314 3229 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
ABCD3P28288 FAP-203ENST00000443424 2598 ntTSL 2 BASIC4.53□□□□□ -1.68
ABCD3P28288 ELF2-203ENST00000379550 3278 ntTSL 5 BASIC4.52□□□□□ -1.69
ABCD3P28288 TPTE2-202ENST00000382978 1677 ntTSL 5 BASIC4.52□□□□□ -1.69
ABCD3P28288 AC126323.6-202ENST00000568092 3511 ntBASIC4.52□□□□□ -1.69
ABCD3P28288 FAM107B-229ENST00000622567 3510 ntAPPRIS P1 TSL 2 BASIC4.52□□□□□ -1.69
ABCD3P28288 ZNF681-201ENST00000402377 6497 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
ABCD3P28288 CCDC68-201ENST00000337363 1457 ntAPPRIS P1 TSL 2 BASIC4.52□□□□□ -1.69
ABCD3P28288 ANKRD34C-201ENST00000421388 4951 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
ABCD3P28288 AC118758.3-201ENST00000624628 24137 ntTSL 5 BASIC4.52□□□□□ -1.69
ABCD3P28288 TEX35-202ENST00000367639 785 ntAPPRIS ALT2 TSL 1 (best) BASIC4.52□□□□□ -1.69
ABCD3P28288 MLLT3-201ENST00000380321 708 ntTSL 3 BASIC4.52□□□□□ -1.69
ABCD3P28288 MANSC4-201ENST00000381273 1023 ntAPPRIS P1 TSL 5 BASIC4.52□□□□□ -1.69
ABCD3P28288 RNU6-1226P-201ENST00000384317 107 ntBASIC4.52□□□□□ -1.69
ABCD3P28288 SNORA70E-201ENST00000384492 135 ntBASIC4.52□□□□□ -1.69
ABCD3P28288 AL357515.1-201ENST00000402967 542 ntBASIC4.52□□□□□ -1.69
ABCD3P28288 AL023807.1-201ENST00000407932 359 ntBASIC4.52□□□□□ -1.69
ABCD3P28288 RNU2-42P-201ENST00000410697 113 ntBASIC4.52□□□□□ -1.69
ABCD3P28288 AL020994.2-201ENST00000413244 571 ntTSL 4 BASIC4.52□□□□□ -1.69
ABCD3P28288 AL161449.1-201ENST00000414531 1199 ntBASIC4.52□□□□□ -1.69
ABCD3P28288 RPS24P7-201ENST00000416921 246 ntBASIC4.52□□□□□ -1.69
ABCD3P28288 C5orf58-201ENST00000421269 406 ntAPPRIS ALT2 TSL 2 BASIC4.52□□□□□ -1.69
ABCD3P28288 SDCBPP2-201ENST00000424643 885 ntBASIC4.52□□□□□ -1.69
ABCD3P28288 USP9YP11-201ENST00000427537 717 ntBASIC4.52□□□□□ -1.69
ABCD3P28288 HMGB3P5-201ENST00000428894 612 ntBASIC4.52□□□□□ -1.69
ABCD3P28288 SPINK8-201ENST00000434006 444 ntAPPRIS P1 TSL 3 BASIC4.52□□□□□ -1.69
ABCD3P28288 LIX1L-AS1-204ENST00000437207 222 ntTSL 5 BASIC4.52□□□□□ -1.69
ABCD3P28288 LIX1L-AS1-205ENST00000437797 536 ntTSL 3 BASIC4.52□□□□□ -1.69
ABCD3P28288 TBX18-AS1-202ENST00000441863 382 ntTSL 2 BASIC4.52□□□□□ -1.69
ABCD3P28288 MRPL48P1-201ENST00000445390 636 ntBASIC4.52□□□□□ -1.69
ABCD3P28288 AC000111.2-201ENST00000448200 210 ntBASIC4.52□□□□□ -1.69
ABCD3P28288 AL161912.1-201ENST00000448475 524 ntTSL 3 BASIC4.52□□□□□ -1.69
ABCD3P28288 SLC25A18P1-201ENST00000449385 454 ntBASIC4.52□□□□□ -1.69
ABCD3P28288 AC010976.1-211ENST00000454503 644 ntTSL 2 BASIC4.52□□□□□ -1.69
ABCD3P28288 TRBV26-201ENST00000456572 344 ntBASIC4.52□□□□□ -1.69
ABCD3P28288 RPL23AP56-201ENST00000460778 453 ntBASIC4.52□□□□□ -1.69
ABCD3P28288 RN7SL517P-201ENST00000462240 305 ntBASIC4.52□□□□□ -1.69
ABCD3P28288 MDM2-217ENST00000478070 692 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
ABCD3P28288 RPL7P16-201ENST00000479738 738 ntBASIC4.52□□□□□ -1.69
ABCD3P28288 GAPDHP36-201ENST00000480688 918 ntBASIC4.52□□□□□ -1.69
ABCD3P28288 PLSCR5-202ENST00000482567 1018 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
ABCD3P28288 AC069444.1-201ENST00000489428 266 ntTSL 3 BASIC4.52□□□□□ -1.69
ABCD3P28288 AC106821.1-201ENST00000502861 572 ntTSL 5 BASIC4.52□□□□□ -1.69
ABCD3P28288 GAPDHP56-201ENST00000506031 988 ntBASIC4.52□□□□□ -1.69
ABCD3P28288 AC008837.2-201ENST00000513076 418 ntBASIC4.52□□□□□ -1.69
ABCD3P28288 AC069272.1-201ENST00000514843 680 ntTSL 3 BASIC4.52□□□□□ -1.69
ABCD3P28288 HMGB1P19-201ENST00000517578 577 ntBASIC4.52□□□□□ -1.69
ABCD3P28288 AC015468.3-201ENST00000518967 417 ntTSL 2 BASIC4.52□□□□□ -1.69
ABCD3P28288 RPL23AP53-201ENST00000521854 457 ntBASIC4.52□□□□□ -1.69
ABCD3P28288 AC013714.1-201ENST00000524707 747 ntTSL 3 BASIC4.52□□□□□ -1.69
ABCD3P28288 CD44-AS1-201ENST00000528869 587 ntTSL 4 BASIC4.52□□□□□ -1.69
ABCD3P28288 ZNF705CP-201ENST00000530515 889 ntBASIC4.52□□□□□ -1.69
ABCD3P28288 OR4A12P-201ENST00000530847 918 ntBASIC4.52□□□□□ -1.69
ABCD3P28288 AC022081.1-201ENST00000537327 433 ntTSL 2 BASIC4.52□□□□□ -1.69
ABCD3P28288 AC034102.2-201ENST00000548861 489 ntAPPRIS P1 TSL 5 BASIC4.52□□□□□ -1.69
ABCD3P28288 PCNPP1-201ENST00000552501 511 ntBASIC4.52□□□□□ -1.69
ABCD3P28288 AL355096.1-201ENST00000553561 447 ntTSL 3 BASIC4.52□□□□□ -1.69
ABCD3P28288 AL132657.2-201ENST00000564417 358 ntBASIC4.52□□□□□ -1.69
ABCD3P28288 AC138915.2-201ENST00000569776 97 ntBASIC4.52□□□□□ -1.69
ABCD3P28288 AC007599.2-201ENST00000573040 493 ntTSL 5 BASIC4.52□□□□□ -1.69
ABCD3P28288 MIR4436B2-201ENST00000581415 91 ntBASIC4.52□□□□□ -1.69
ABCD3P28288 MIR4436B1-201ENST00000583272 91 ntBASIC4.52□□□□□ -1.69
ABCD3P28288 MIR4443-201ENST00000585052 53 ntBASIC4.52□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 148.9 ms