Protein–RNA interactions for Protein: P20585

MSH3, DNA mismatch repair protein Msh3, humanhuman

Predictions only

Length 1,137 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSH3P20585 MIR708-201ENST00000390708 88 ntBASIC4.36□□□□□ -1.71
MSH3P20585 AC093719.1-202ENST00000392735 373 ntBASIC4.36□□□□□ -1.71
MSH3P20585 RPL7P27-201ENST00000403775 720 ntBASIC4.36□□□□□ -1.71
MSH3P20585 HMGB3P18-201ENST00000406327 590 ntBASIC4.36□□□□□ -1.71
MSH3P20585 SNORA74C-2-201ENST00000411179 201 ntBASIC4.36□□□□□ -1.71
MSH3P20585 AL133480.1-201ENST00000411561 638 ntTSL 2 BASIC4.36□□□□□ -1.71
MSH3P20585 AC013404.1-201ENST00000413068 249 ntBASIC4.36□□□□□ -1.71
MSH3P20585 AC098872.1-201ENST00000413304 543 ntTSL 3 BASIC4.36□□□□□ -1.71
MSH3P20585 VTA1P1-201ENST00000414044 866 ntBASIC4.36□□□□□ -1.71
MSH3P20585 AL592310.1-201ENST00000414330 671 ntBASIC4.36□□□□□ -1.71
MSH3P20585 AL590727.1-201ENST00000418652 771 ntTSL 2 BASIC4.36□□□□□ -1.71
MSH3P20585 AC003075.1-202ENST00000419382 720 ntTSL 3 BASIC4.36□□□□□ -1.71
MSH3P20585 AC048351.1-201ENST00000420064 602 ntBASIC4.36□□□□□ -1.71
MSH3P20585 AC006007.1-201ENST00000422084 672 ntTSL 2 BASIC4.36□□□□□ -1.71
MSH3P20585 LINC01492-202ENST00000425157 659 ntTSL 5 BASIC4.36□□□□□ -1.71
MSH3P20585 MOBP-206ENST00000428261 561 ntAPPRIS ALT2 TSL 4 BASIC4.36□□□□□ -1.71
MSH3P20585 AF230666.1-201ENST00000429151 786 ntTSL 2 BASIC4.36□□□□□ -1.71
MSH3P20585 DYNLL1P7-201ENST00000429273 258 ntBASIC4.36□□□□□ -1.71
MSH3P20585 PPEF1-AS1-201ENST00000430641 430 ntTSL 5 BASIC4.36□□□□□ -1.71
MSH3P20585 AC005828.1-201ENST00000431604 524 ntTSL 5 BASIC4.36□□□□□ -1.71
MSH3P20585 AL132765.1-201ENST00000434165 553 ntBASIC4.36□□□□□ -1.71
MSH3P20585 ELOCP10-201ENST00000440624 327 ntBASIC4.36□□□□□ -1.71
MSH3P20585 AC024597.1-201ENST00000442753 706 ntTSL 5 BASIC4.36□□□□□ -1.71
MSH3P20585 MTOR-AS1-202ENST00000445982 705 ntTSL 5 BASIC4.36□□□□□ -1.71
MSH3P20585 MTND1P33-201ENST00000446251 917 ntBASIC4.36□□□□□ -1.71
MSH3P20585 PHBP16-201ENST00000446318 950 ntBASIC4.36□□□□□ -1.71
MSH3P20585 OR51B8P-201ENST00000449892 769 ntBASIC4.36□□□□□ -1.71
MSH3P20585 ZNF736P8Y-201ENST00000451913 669 ntBASIC4.36□□□□□ -1.71
MSH3P20585 AL035407.2-201ENST00000454090 378 ntBASIC4.36□□□□□ -1.71
MSH3P20585 DHFRP3-201ENST00000455595 559 ntBASIC4.36□□□□□ -1.71
MSH3P20585 AL122008.1-201ENST00000456078 452 ntTSL 3 BASIC4.36□□□□□ -1.71
MSH3P20585 SNORD11.1-201ENST00000459482 85 ntBASIC4.36□□□□□ -1.71
MSH3P20585 RPL6P9-201ENST00000466502 859 ntBASIC4.36□□□□□ -1.71
MSH3P20585 CREM-230ENST00000474931 626 ntTSL 2 BASIC4.36□□□□□ -1.71
MSH3P20585 RN7SL810P-201ENST00000493031 276 ntBASIC4.36□□□□□ -1.71
MSH3P20585 AC113420.1-201ENST00000507903 571 ntBASIC4.36□□□□□ -1.71
MSH3P20585 ATP1B1P1-201ENST00000509767 915 ntBASIC4.36□□□□□ -1.71
MSH3P20585 LINC02231-201ENST00000510459 447 ntTSL 3 BASIC4.36□□□□□ -1.71
MSH3P20585 RNU6-347P-201ENST00000516658 105 ntBASIC4.36□□□□□ -1.71
MSH3P20585 RNU6-1028P-201ENST00000517164 93 ntBASIC4.36□□□□□ -1.71
MSH3P20585 AC133634.1-201ENST00000517695 566 ntTSL 3 BASIC4.36□□□□□ -1.71
MSH3P20585 RAB9BP1-201ENST00000519581 626 ntBASIC4.36□□□□□ -1.71
MSH3P20585 EEF1A1P37-201ENST00000522748 715 ntBASIC4.36□□□□□ -1.71
MSH3P20585 LINC00944-201ENST00000536517 421 ntTSL 2 BASIC4.36□□□□□ -1.71
MSH3P20585 AL161757.2-201ENST00000553800 421 ntTSL 3 BASIC4.36□□□□□ -1.71
MSH3P20585 MIR5096-201ENST00000583713 70 ntBASIC4.36□□□□□ -1.71
MSH3P20585 AC007952.9-201ENST00000584365 191 ntTSL 3 BASIC4.36□□□□□ -1.71
MSH3P20585 AC092902.2-202ENST00000599350 686 ntTSL 3 BASIC4.36□□□□□ -1.71
MSH3P20585 ELOCP34-201ENST00000604436 327 ntBASIC4.36□□□□□ -1.71
MSH3P20585 AC106052.1-201ENST00000608029 497 ntBASIC4.36□□□□□ -1.71
MSH3P20585 AL138721.1-201ENST00000616756 179 ntBASIC4.36□□□□□ -1.71
MSH3P20585 MIR6891-201ENST00000618788 93 ntBASIC4.36□□□□□ -1.71
MSH3P20585 AC074387.1-201ENST00000632044 823 ntTSL 2 BASIC4.36□□□□□ -1.71
MSH3P20585 AC139713.2-210ENST00000641741 992 ntBASIC4.36□□□□□ -1.71
MSH3P20585 LINC02432-202ENST00000509161 2839 ntTSL 2 BASIC4.36□□□□□ -1.71
MSH3P20585 TAX1BP1-202ENST00000396319 2892 ntAPPRIS P3 TSL 1 (best) BASIC4.36□□□□□ -1.71
MSH3P20585 AL133243.3-201ENST00000617415 3004 ntBASIC4.36□□□□□ -1.71
MSH3P20585 CD200R1-204ENST00000471858 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC4.36□□□□□ -1.71
MSH3P20585 OR5M3-202ENST00000641993 1400 ntAPPRIS P1 BASIC4.36□□□□□ -1.71
MSH3P20585 THOC2-202ENST00000355725 4930 ntAPPRIS P1 TSL 5 BASIC4.36□□□□□ -1.71
MSH3P20585 ADGRL2-205ENST00000370717 5873 ntAPPRIS ALT2 TSL 5 BASIC4.36□□□□□ -1.71
MSH3P20585 SCAI-201ENST00000336505 12079 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
MSH3P20585 KTN1-223ENST00000555573 1712 ntTSL 2 BASIC4.35□□□□□ -1.71
MSH3P20585 LYST-201ENST00000389793 13480 ntAPPRIS P1 TSL 5 BASIC4.35□□□□□ -1.71
MSH3P20585 ALG6-201ENST00000263440 1895 ntAPPRIS ALT1 TSL 5 BASIC4.35□□□□□ -1.71
MSH3P20585 TUG1-201ENST00000519077 5673 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
MSH3P20585 MBNL1-211ENST00000463374 5092 ntAPPRIS P4 TSL 1 (best) BASIC4.35□□□□□ -1.71
MSH3P20585 DMD-230ENST00000620040 13746 ntAPPRIS ALT2 TSL 5 BASIC4.35□□□□□ -1.71
MSH3P20585 RBMS1-202ENST00000392753 3781 ntTSL 5 BASIC4.35□□□□□ -1.71
MSH3P20585 AC008033.1-201ENST00000216407 1162 ntBASIC4.35□□□□□ -1.71
MSH3P20585 LGALS13-201ENST00000221797 602 ntAPPRIS P2 TSL 1 (best) BASIC4.35□□□□□ -1.71
MSH3P20585 HOMER1-201ENST00000282260 774 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
MSH3P20585 RNU1-32P-201ENST00000363937 159 ntBASIC4.35□□□□□ -1.71
MSH3P20585 FAM26F-203ENST00000368606 546 ntTSL 3 BASIC4.35□□□□□ -1.71
MSH3P20585 CoTC_ribozyme.1-201ENST00000408104 192 ntBASIC4.35□□□□□ -1.71
MSH3P20585 AP000357.1-201ENST00000409926 1165 ntBASIC4.35□□□□□ -1.71
MSH3P20585 ELOCP19-201ENST00000411919 318 ntBASIC4.35□□□□□ -1.71
MSH3P20585 AL031674.1-202ENST00000413070 465 ntTSL 3 BASIC4.35□□□□□ -1.71
MSH3P20585 AC015971.1-204ENST00000424788 1147 ntTSL 5 BASIC4.35□□□□□ -1.71
MSH3P20585 SCP2-206ENST00000430330 938 ntTSL 2 BASIC4.35□□□□□ -1.71
MSH3P20585 MTND1P26-201ENST00000440488 538 ntBASIC4.35□□□□□ -1.71
MSH3P20585 AC114495.1-201ENST00000441274 436 ntBASIC4.35□□□□□ -1.71
MSH3P20585 AL033380.1-201ENST00000442781 421 ntTSL 2 BASIC4.35□□□□□ -1.71
MSH3P20585 GEMIN8P3-201ENST00000445417 720 ntBASIC4.35□□□□□ -1.71
MSH3P20585 AL133260.2-201ENST00000445833 396 ntTSL 3 BASIC4.35□□□□□ -1.71
MSH3P20585 MTND2P8-201ENST00000450555 1025 ntBASIC4.35□□□□□ -1.71
MSH3P20585 TPTE2P6-203ENST00000450973 649 ntTSL 5 BASIC4.35□□□□□ -1.71
MSH3P20585 AC010976.1-211ENST00000454503 644 ntTSL 2 BASIC4.35□□□□□ -1.71
MSH3P20585 RPL7P32-201ENST00000457119 744 ntBASIC4.35□□□□□ -1.71
MSH3P20585 RPL23AP24-201ENST00000458203 385 ntBASIC4.35□□□□□ -1.71
MSH3P20585 AL139824.2-201ENST00000458731 1095 ntBASIC4.35□□□□□ -1.71
MSH3P20585 C1orf143-202ENST00000491260 813 ntTSL 3 BASIC4.35□□□□□ -1.71
MSH3P20585 LINC02017-201ENST00000496829 474 ntTSL 3 BASIC4.35□□□□□ -1.71
MSH3P20585 AC109349.1-201ENST00000503299 758 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
MSH3P20585 PGRMC2-203ENST00000503588 818 ntTSL 4 BASIC4.35□□□□□ -1.71
MSH3P20585 AC112695.1-201ENST00000504213 592 ntTSL 2 BASIC4.35□□□□□ -1.71
MSH3P20585 AC026719.1-201ENST00000506059 456 ntTSL 3 BASIC4.35□□□□□ -1.71
MSH3P20585 AC079921.1-201ENST00000509449 946 ntTSL 3 BASIC4.35□□□□□ -1.71
MSH3P20585 PGBD4P4-201ENST00000509673 613 ntBASIC4.35□□□□□ -1.71
MSH3P20585 AC097103.2-204ENST00000510068 569 ntTSL 3 BASIC4.35□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 98.5 ms