Protein–RNA interactions for Protein: P19447

ERCC3, TFIIH basal transcription factor complex helicase XPB subunit, humanhuman

Predictions only

Length 782 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3P19447 AP000893.1-201ENST00000474462 794 ntBASIC6.55□□□□□ -1.36
ERCC3P19447 AC093270.2-201ENST00000486157 792 ntBASIC6.55□□□□□ -1.36
ERCC3P19447 AC096751.1-202ENST00000502691 1067 ntBASIC6.55□□□□□ -1.36
ERCC3P19447 AC024558.1-201ENST00000505008 528 ntBASIC6.55□□□□□ -1.36
ERCC3P19447 NDUFB4P2-201ENST00000509515 391 ntBASIC6.55□□□□□ -1.36
ERCC3P19447 AC074255.1-201ENST00000511259 501 ntBASIC6.55□□□□□ -1.36
ERCC3P19447 AC024589.1-201ENST00000512207 263 ntBASIC6.55□□□□□ -1.36
ERCC3P19447 AC034159.1-201ENST00000513885 583 ntBASIC6.55□□□□□ -1.36
ERCC3P19447 RNU6-941P-201ENST00000516346 108 ntBASIC6.55□□□□□ -1.36
ERCC3P19447 PAICSP4-201ENST00000517543 1253 ntBASIC6.55□□□□□ -1.36
ERCC3P19447 AC069113.2-201ENST00000517735 359 ntTSL 3 BASIC6.55□□□□□ -1.36
ERCC3P19447 AC022861.1-201ENST00000522981 663 ntBASIC6.55□□□□□ -1.36
ERCC3P19447 IL18-204ENST00000528832 795 ntAPPRIS P3 TSL 3 BASIC6.55□□□□□ -1.36
ERCC3P19447 AP003557.1-201ENST00000531715 585 ntTSL 3 BASIC6.55□□□□□ -1.36
ERCC3P19447 OR10G5P-201ENST00000532733 358 ntBASIC6.55□□□□□ -1.36
ERCC3P19447 AL390334.1-201ENST00000556395 450 ntBASIC6.55□□□□□ -1.36
ERCC3P19447 LINC02129-201ENST00000564381 692 ntTSL 5 BASIC6.55□□□□□ -1.36
ERCC3P19447 AC087500.2-201ENST00000575056 498 ntTSL 5 BASIC6.55□□□□□ -1.36
ERCC3P19447 AC068112.1-201ENST00000580057 346 ntTSL 3 BASIC6.55□□□□□ -1.36
ERCC3P19447 AL121989.1-201ENST00000585888 746 ntTSL 3 BASIC6.55□□□□□ -1.36
ERCC3P19447 AP003465.2-201ENST00000602571 373 ntBASIC6.55□□□□□ -1.36
ERCC3P19447 AL512329.2-201ENST00000607350 548 ntBASIC6.55□□□□□ -1.36
ERCC3P19447 MIR6864-201ENST00000617935 70 ntBASIC6.55□□□□□ -1.36
ERCC3P19447 AC118658.2-201ENST00000618697 459 ntBASIC6.55□□□□□ -1.36
ERCC3P19447 SEPT14P19-203ENST00000633205 211 ntBASIC6.55□□□□□ -1.36
ERCC3P19447 SAMMSON-227ENST00000642114 1199 ntBASIC6.55□□□□□ -1.36
ERCC3P19447 ZFYVE9-202ENST00000357206 4567 ntAPPRIS ALT1 TSL 1 (best) BASIC6.55□□□□□ -1.36
ERCC3P19447 TDRD5-202ENST00000367614 3632 ntAPPRIS P3 TSL 2 BASIC6.55□□□□□ -1.36
ERCC3P19447 ADAM21-201ENST00000603540 2658 ntAPPRIS P1 TSL 3 BASIC6.55□□□□□ -1.36
ERCC3P19447 PSG9-202ENST00000270077 1705 ntAPPRIS P2 TSL 1 (best) BASIC6.55□□□□□ -1.36
ERCC3P19447 AL031119.1-201ENST00000404707 1879 ntBASIC6.55□□□□□ -1.36
ERCC3P19447 LINC02421-201ENST00000542219 3135 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
ERCC3P19447 ANK3-216ENST00000503366 5792 ntAPPRIS ALT2 TSL 2 BASIC6.55□□□□□ -1.36
ERCC3P19447 IPCEF1-203ENST00000422970 3267 ntAPPRIS ALT2 TSL 1 (best) BASIC6.55□□□□□ -1.36
ERCC3P19447 TRRAP-204ENST00000446306 12492 ntAPPRIS ALT2 TSL 5 BASIC6.55□□□□□ -1.36
ERCC3P19447 MUC17-201ENST00000306151 14247 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
ERCC3P19447 IRAK4-203ENST00000448290 1381 ntTSL 5 BASIC6.55□□□□□ -1.36
ERCC3P19447 ESRRG-205ENST00000366937 5365 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
ERCC3P19447 COL14A1-209ENST00000537875 3119 ntTSL 5 BASIC6.54□□□□□ -1.36
ERCC3P19447 AP001267.1-201ENST00000531742 2074 ntTSL 2 BASIC6.54□□□□□ -1.36
ERCC3P19447 C15orf54-202ENST00000625107 3078 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
ERCC3P19447 MTTP-203ENST00000457717 4092 ntAPPRIS P1 TSL 5 BASIC6.54□□□□□ -1.36
ERCC3P19447 TTTY13-201ENST00000330337 659 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
ERCC3P19447 RNA5SP30-201ENST00000365552 115 ntBASIC6.54□□□□□ -1.36
ERCC3P19447 NFIB-202ENST00000380924 840 ntTSL 5 BASIC6.54□□□□□ -1.36
ERCC3P19447 RNU6-533P-201ENST00000384144 107 ntBASIC6.54□□□□□ -1.36
ERCC3P19447 HMGB1P17-201ENST00000403495 628 ntBASIC6.54□□□□□ -1.36
ERCC3P19447 FLJ27354-201ENST00000415584 788 ntTSL 2 BASIC6.54□□□□□ -1.36
ERCC3P19447 NUP35P2-201ENST00000416748 943 ntBASIC6.54□□□□□ -1.36
ERCC3P19447 AC073136.2-201ENST00000417282 849 ntBASIC6.54□□□□□ -1.36
ERCC3P19447 AL139008.2-201ENST00000420315 395 ntTSL 3 BASIC6.54□□□□□ -1.36
ERCC3P19447 AL713851.2-201ENST00000431209 332 ntTSL 2 BASIC6.54□□□□□ -1.36
ERCC3P19447 RPL23AP74-201ENST00000437246 471 ntBASIC6.54□□□□□ -1.36
ERCC3P19447 GDI2P2-201ENST00000445131 608 ntBASIC6.54□□□□□ -1.36
ERCC3P19447 AL590365.1-201ENST00000450788 243 ntBASIC6.54□□□□□ -1.36
ERCC3P19447 AC004129.2-201ENST00000457229 287 ntBASIC6.54□□□□□ -1.36
ERCC3P19447 snoU109.1-201ENST00000459339 135 ntBASIC6.54□□□□□ -1.36
ERCC3P19447 RPS4XP1-201ENST00000482189 787 ntBASIC6.54□□□□□ -1.36
ERCC3P19447 AC004069.1-201ENST00000504082 549 ntTSL 4 BASIC6.54□□□□□ -1.36
ERCC3P19447 AC027343.1-201ENST00000504765 407 ntTSL 4 BASIC6.54□□□□□ -1.36
ERCC3P19447 HIGD1AP14-201ENST00000507617 282 ntBASIC6.54□□□□□ -1.36
ERCC3P19447 AC087241.1-201ENST00000508615 429 ntTSL 5 BASIC6.54□□□□□ -1.36
ERCC3P19447 AC063979.2-201ENST00000513767 958 ntTSL 5 BASIC6.54□□□□□ -1.36
ERCC3P19447 AC108727.1-201ENST00000513802 393 ntTSL 2 BASIC6.54□□□□□ -1.36
ERCC3P19447 UBE2Q2P10-201ENST00000514854 900 ntBASIC6.54□□□□□ -1.36
ERCC3P19447 AC090193.1-201ENST00000518633 543 ntTSL 4 BASIC6.54□□□□□ -1.36
ERCC3P19447 AC084116.2-201ENST00000520171 415 ntTSL 4 BASIC6.54□□□□□ -1.36
ERCC3P19447 OR5G4P-201ENST00000525251 760 ntBASIC6.54□□□□□ -1.36
ERCC3P19447 LINC02384-205ENST00000539404 785 ntTSL 3 BASIC6.54□□□□□ -1.36
ERCC3P19447 APPL2-203ENST00000546731 684 ntTSL 2 BASIC6.54□□□□□ -1.36
ERCC3P19447 AC090109.1-201ENST00000548885 819 ntTSL 3 BASIC6.54□□□□□ -1.36
ERCC3P19447 AL355096.1-201ENST00000553561 447 ntTSL 3 BASIC6.54□□□□□ -1.36
ERCC3P19447 AC055874.1-201ENST00000561458 479 ntTSL 2 BASIC6.54□□□□□ -1.36
ERCC3P19447 MIR5697-201ENST00000578045 78 ntBASIC6.54□□□□□ -1.36
ERCC3P19447 LINC02563-201ENST00000579474 277 ntTSL 3 BASIC6.54□□□□□ -1.36
ERCC3P19447 AC005702.2-201ENST00000591035 481 ntAPPRIS P1 TSL 3 BASIC6.54□□□□□ -1.36
ERCC3P19447 AC097717.1-249ENST00000608040 401 ntTSL 5 BASIC6.54□□□□□ -1.36
ERCC3P19447 AC013476.2-201ENST00000614456 459 ntBASIC6.54□□□□□ -1.36
ERCC3P19447 AL355974.3-201ENST00000617383 467 ntBASIC6.54□□□□□ -1.36
ERCC3P19447 AC132068.1-201ENST00000623805 459 ntBASIC6.54□□□□□ -1.36
ERCC3P19447 AC000095.2-202ENST00000637415 154 ntBASIC6.54□□□□□ -1.36
ERCC3P19447 ZNF850-202ENST00000591344 7714 ntAPPRIS P3 TSL 1 (best) BASIC6.54□□□□□ -1.36
ERCC3P19447 FAM229B-201ENST00000368656 2543 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
ERCC3P19447 GABRA2-202ENST00000381620 2525 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
ERCC3P19447 SCAPER-207ENST00000563290 5028 ntAPPRIS P1 TSL 5 BASIC6.54□□□□□ -1.36
ERCC3P19447 ZMAT1-201ENST00000372782 3185 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
ERCC3P19447 DSC2-201ENST00000251081 4826 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
ERCC3P19447 MYBPC1-209ENST00000547509 3749 ntAPPRIS ALT2 TSL 5 BASIC6.53□□□□□ -1.36
ERCC3P19447 TAF7L-201ENST00000324762 2107 ntAPPRIS ALT2 TSL 2 BASIC6.53□□□□□ -1.36
ERCC3P19447 ATF2-221ENST00000538946 1325 ntTSL 5 BASIC6.53□□□□□ -1.36
ERCC3P19447 AC109446.4-201ENST00000623235 2755 ntBASIC6.53□□□□□ -1.36
ERCC3P19447 ARHGAP20-206ENST00000533353 6066 ntAPPRIS ALT2 TSL 1 (best) BASIC6.53□□□□□ -1.36
ERCC3P19447 CTAGE5-217ENST00000557038 2869 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
ERCC3P19447 KBTBD3-201ENST00000526793 3751 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
ERCC3P19447 ANKRD36BP1-202ENST00000604892 1417 ntBASIC6.53□□□□□ -1.36
ERCC3P19447 CNGA1-207ENST00000514170 2837 ntAPPRIS P3 TSL 5 BASIC6.53□□□□□ -1.36
ERCC3P19447 RFC1-202ENST00000381897 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC6.53□□□□□ -1.36
ERCC3P19447 AC008060.2-201ENST00000415333 468 ntTSL 3 BASIC6.53□□□□□ -1.36
ERCC3P19447 LINC01359-201ENST00000415842 1157 ntTSL 2 BASIC6.53□□□□□ -1.36
ERCC3P19447 RAD23BP2-201ENST00000416003 1207 ntBASIC6.53□□□□□ -1.36
Retrieved 100 of 98,524 protein–RNA pairs in 105.5 ms