Protein–RNA interactions for Protein: P13378

HOXD8, Homeobox protein Hox-D8, humanhuman

Predicted RBP Predictions only

Length 290 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD8P13378 LINC01835-202ENST00000589345 450 ntTSL 3 BASIC6.43□□□□□ -1.38
HOXD8P13378 AL133215.3-201ENST00000609801 448 ntBASIC6.43□□□□□ -1.38
HOXD8P13378 AL133173.2-201ENST00000614270 90 ntBASIC6.43□□□□□ -1.38
HOXD8P13378 Xist_exon4.1-201ENST00000615964 126 ntBASIC6.43□□□□□ -1.38
HOXD8P13378 AC069234.4-201ENST00000621276 412 ntBASIC6.43□□□□□ -1.38
HOXD8P13378 MAMDC2-AS1-201ENST00000377178 1504 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
HOXD8P13378 AL161911.1-202ENST00000464488 1534 ntAPPRIS P1 TSL 5 BASIC6.43□□□□□ -1.38
HOXD8P13378 ATMIN-204ENST00000564241 4803 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
HOXD8P13378 GPX8-201ENST00000296734 3245 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
HOXD8P13378 MTAP-210ENST00000580900 7557 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
HOXD8P13378 DSC1-202ENST00000257198 4225 ntAPPRIS P4 TSL 2 BASIC6.43□□□□□ -1.38
HOXD8P13378 DLEU7-AS1-201ENST00000413510 1806 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
HOXD8P13378 RPL37-201ENST00000274242 7686 ntAPPRIS P2 TSL 1 (best) BASIC6.43□□□□□ -1.38
HOXD8P13378 LINC00702-203ENST00000608792 6300 ntTSL 4 BASIC6.43□□□□□ -1.38
HOXD8P13378 PCNX4-201ENST00000317623 17339 ntAPPRIS P3 TSL 5 BASIC6.43□□□□□ -1.38
HOXD8P13378 LRRC7-203ENST00000370958 2375 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
HOXD8P13378 CTAGE5-217ENST00000557038 2869 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
HOXD8P13378 CHD6-203ENST00000373233 10818 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
HOXD8P13378 PCAT19-201ENST00000588495 3472 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
HOXD8P13378 EED-203ENST00000351625 1696 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
HOXD8P13378 MED12L-206ENST00000474524 10744 ntAPPRIS P2 TSL 1 (best) BASIC6.42□□□□□ -1.38
HOXD8P13378 AL022323.4-201ENST00000623980 13120 ntBASIC6.42□□□□□ -1.38
HOXD8P13378 OFD1P5Y-201ENST00000447585 2590 ntBASIC6.42□□□□□ -1.38
HOXD8P13378 PHC3-203ENST00000467570 2595 ntTSL 2 BASIC6.42□□□□□ -1.38
HOXD8P13378 AC105105.2-201ENST00000590797 4521 ntTSL 2 BASIC6.42□□□□□ -1.38
HOXD8P13378 LRRC37A16P-202ENST00000586022 3725 ntBASIC6.42□□□□□ -1.38
HOXD8P13378 MUC5B-204ENST00000529681 17911 ntAPPRIS P1 TSL 5 BASIC6.42□□□□□ -1.38
HOXD8P13378 RNA5SP443-201ENST00000363083 132 ntBASIC6.42□□□□□ -1.38
HOXD8P13378 RNU6-289P-201ENST00000364093 107 ntBASIC6.42□□□□□ -1.38
HOXD8P13378 SNORA58B-201ENST00000364259 136 ntBASIC6.42□□□□□ -1.38
HOXD8P13378 MRPL42P2-201ENST00000403169 426 ntBASIC6.42□□□□□ -1.38
HOXD8P13378 AL122016.1-201ENST00000403365 367 ntBASIC6.42□□□□□ -1.38
HOXD8P13378 AL354719.1-201ENST00000406535 843 ntBASIC6.42□□□□□ -1.38
HOXD8P13378 GAPDHP42-201ENST00000406848 981 ntBASIC6.42□□□□□ -1.38
HOXD8P13378 RNU2-28P-201ENST00000410457 189 ntBASIC6.42□□□□□ -1.38
HOXD8P13378 RNU2-8P-201ENST00000410727 190 ntBASIC6.42□□□□□ -1.38
HOXD8P13378 RNU6-373P-201ENST00000411247 98 ntBASIC6.42□□□□□ -1.38
HOXD8P13378 AL354733.1-204ENST00000412069 424 ntTSL 5 BASIC6.42□□□□□ -1.38
HOXD8P13378 ATP2B2-IT2-201ENST00000419591 507 ntTSL 2 BASIC6.42□□□□□ -1.38
HOXD8P13378 AL353193.1-201ENST00000421444 268 ntBASIC6.42□□□□□ -1.38
HOXD8P13378 LINC02523-201ENST00000423208 2963 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
HOXD8P13378 AL589872.1-201ENST00000426602 288 ntBASIC6.42□□□□□ -1.38
HOXD8P13378 AP001476.3-201ENST00000429512 415 ntTSL 3 BASIC6.42□□□□□ -1.38
HOXD8P13378 AL049749.1-201ENST00000430281 632 ntTSL 2 BASIC6.42□□□□□ -1.38
HOXD8P13378 LINC00484-204ENST00000439438 454 ntTSL 3 BASIC6.42□□□□□ -1.38
HOXD8P13378 FOCAD-AS1-201ENST00000439876 359 ntTSL 2 BASIC6.42□□□□□ -1.38
HOXD8P13378 AL450996.1-201ENST00000445574 1202 ntBASIC6.42□□□□□ -1.38
HOXD8P13378 MRPL50P4-201ENST00000446432 475 ntBASIC6.42□□□□□ -1.38
HOXD8P13378 AL450023.1-201ENST00000450868 751 ntBASIC6.42□□□□□ -1.38
HOXD8P13378 AC239798.3-201ENST00000454459 408 ntBASIC6.42□□□□□ -1.38
HOXD8P13378 RN7SL799P-201ENST00000475891 298 ntBASIC6.42□□□□□ -1.38
HOXD8P13378 AC016556.1-201ENST00000510004 935 ntTSL 2 BASIC6.42□□□□□ -1.38
HOXD8P13378 RN7SKP288-201ENST00000516227 268 ntBASIC6.42□□□□□ -1.38
HOXD8P13378 RNA5SP34-201ENST00000516887 130 ntBASIC6.42□□□□□ -1.38
HOXD8P13378 HIGD1AP6-201ENST00000521833 279 ntBASIC6.42□□□□□ -1.38
HOXD8P13378 PHBP17-201ENST00000528576 541 ntBASIC6.42□□□□□ -1.38
HOXD8P13378 AP003781.1-201ENST00000543403 404 ntTSL 3 BASIC6.42□□□□□ -1.38
HOXD8P13378 DUX4L52-201ENST00000549363 777 ntBASIC6.42□□□□□ -1.38
HOXD8P13378 HSPE1P2-201ENST00000554777 306 ntBASIC6.42□□□□□ -1.38
HOXD8P13378 LINC02168-201ENST00000565327 352 ntTSL 2 BASIC6.42□□□□□ -1.38
HOXD8P13378 AC015720.2-201ENST00000567709 334 ntBASIC6.42□□□□□ -1.38
HOXD8P13378 MIR4700-201ENST00000578311 74 ntBASIC6.42□□□□□ -1.38
HOXD8P13378 AC119868.1-202ENST00000584741 347 ntTSL 2 BASIC6.42□□□□□ -1.38
HOXD8P13378 CEP164P1-207ENST00000608660 504 ntTSL 5 BASIC6.42□□□□□ -1.38
HOXD8P13378 CERS6-AS1-209ENST00000609766 642 ntTSL 5 BASIC6.42□□□□□ -1.38
HOXD8P13378 AL356515.1-201ENST00000611081 415 ntTSL 3 BASIC6.42□□□□□ -1.38
HOXD8P13378 uc_338.5-201ENST00000611839 155 ntBASIC6.42□□□□□ -1.38
HOXD8P13378 AL603758.1-201ENST00000618654 241 ntBASIC6.42□□□□□ -1.38
HOXD8P13378 AC008121.3-201ENST00000618726 433 ntBASIC6.42□□□□□ -1.38
HOXD8P13378 CAPZA2-214ENST00000628758 525 ntTSL 5 BASIC6.42□□□□□ -1.38
HOXD8P13378 PDE4D-229ENST00000638939 375 ntTSL 5 BASIC6.42□□□□□ -1.38
HOXD8P13378 ATXN7-208ENST00000484332 2741 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
HOXD8P13378 CLSPN-202ENST00000318121 4169 ntAPPRIS P3 TSL 1 (best) BASIC6.42□□□□□ -1.38
HOXD8P13378 MTPAP-201ENST00000263063 5601 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
HOXD8P13378 DMD-202ENST00000343523 5623 ntTSL 5 BASIC6.42□□□□□ -1.38
HOXD8P13378 STON1-202ENST00000406226 5614 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
HOXD8P13378 ACADM-203ENST00000420607 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC6.42□□□□□ -1.38
HOXD8P13378 NLRP11-201ENST00000589093 3417 ntAPPRIS P2 TSL 1 (best) BASIC6.42□□□□□ -1.38
HOXD8P13378 MYBPC1-214ENST00000549145 4031 ntAPPRIS ALT2 TSL 5 BASIC6.42□□□□□ -1.38
HOXD8P13378 AMZ2-206ENST00000577985 2257 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
HOXD8P13378 SNX13-213ENST00000611725 6817 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
HOXD8P13378 CEP85L-201ENST00000360290 1736 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
HOXD8P13378 ADAM21-201ENST00000603540 2658 ntAPPRIS P1 TSL 3 BASIC6.42□□□□□ -1.38
HOXD8P13378 ALB-219ENST00000621085 1418 ntTSL 5 BASIC6.42□□□□□ -1.38
HOXD8P13378 ATF7IP2-204ENST00000396560 3665 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
HOXD8P13378 RNF6P1-201ENST00000444889 1784 ntBASIC6.41□□□□□ -1.38
HOXD8P13378 TRAPPC11-209ENST00000512476 2546 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
HOXD8P13378 ARMCX5-201ENST00000246174 2899 ntAPPRIS P1 TSL 2 BASIC6.41□□□□□ -1.38
HOXD8P13378 RPL7-204ENST00000396467 1526 ntTSL 3 BASIC6.41□□□□□ -1.38
HOXD8P13378 LINC01375-201ENST00000428485 1860 ntTSL 2 BASIC6.41□□□□□ -1.38
HOXD8P13378 IL23R-201ENST00000347310 2912 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
HOXD8P13378 LINC01450-201ENST00000443406 3263 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
HOXD8P13378 NOSTRIN-207ENST00000445023 1569 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
HOXD8P13378 PSG1-206ENST00000595356 1903 ntAPPRIS ALT2 TSL 1 (best) BASIC6.41□□□□□ -1.38
HOXD8P13378 DGKB-202ENST00000402815 5595 ntAPPRIS ALT1 TSL 5 BASIC6.41□□□□□ -1.38
HOXD8P13378 PRRC2C-202ENST00000367742 10366 ntAPPRIS ALT2 TSL 5 BASIC6.41□□□□□ -1.38
HOXD8P13378 DEFB114-201ENST00000322066 253 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
HOXD8P13378 RNA5SP234-201ENST00000363916 119 ntBASIC6.41□□□□□ -1.38
HOXD8P13378 RNU6-777P-201ENST00000364265 104 ntBASIC6.41□□□□□ -1.38
HOXD8P13378 RNU6-282P-201ENST00000365357 103 ntBASIC6.41□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 73.3 ms