Protein–RNA interactions for Protein: P0DP91

CSB-PGBD3, Chimeric ERCC6-PGBD3 protein, humanhuman

Predictions only

Length 1,061 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSB-PGBD3P0DP91 AL160191.1-201ENST00000555480 566 ntTSL 4 BASIC7.46□□□□□ -1.22
CSB-PGBD3P0DP91 LINC00640-203ENST00000556479 576 ntTSL 2 BASIC7.46□□□□□ -1.22
CSB-PGBD3P0DP91 AF107885.2-202ENST00000557653 448 ntTSL 5 BASIC7.46□□□□□ -1.22
CSB-PGBD3P0DP91 SPINK14-202ENST00000562793 157 ntTSL 5 BASIC7.46□□□□□ -1.22
CSB-PGBD3P0DP91 AC015845.1-202ENST00000580184 242 ntTSL 3 BASIC7.46□□□□□ -1.22
CSB-PGBD3P0DP91 AC091691.2-201ENST00000581940 567 ntTSL 4 BASIC7.46□□□□□ -1.22
CSB-PGBD3P0DP91 AC091488.1-201ENST00000604239 660 ntBASIC7.46□□□□□ -1.22
CSB-PGBD3P0DP91 DCAF17-212ENST00000611110 975 ntTSL 1 (best) BASIC7.46□□□□□ -1.22
CSB-PGBD3P0DP91 AC009233.1-201ENST00000616477 371 ntBASIC7.46□□□□□ -1.22
CSB-PGBD3P0DP91 C9orf153-205ENST00000617985 333 ntAPPRIS ALT2 TSL 5 BASIC7.46□□□□□ -1.22
CSB-PGBD3P0DP91 AP003122.6-201ENST00000623831 495 ntBASIC7.46□□□□□ -1.22
CSB-PGBD3P0DP91 AL592430.2-201ENST00000633779 486 ntTSL 5 BASIC7.46□□□□□ -1.22
CSB-PGBD3P0DP91 RASGRP1-203ENST00000450598 2296 ntTSL 1 (best) BASIC7.46□□□□□ -1.22
CSB-PGBD3P0DP91 AC099673.1-201ENST00000452199 2296 ntTSL 2 BASIC7.46□□□□□ -1.22
CSB-PGBD3P0DP91 HTR4-206ENST00000520086 2272 ntTSL 2 BASIC7.46□□□□□ -1.22
CSB-PGBD3P0DP91 OSBPL9-203ENST00000428468 2893 ntAPPRIS P3 TSL 1 (best) BASIC7.46□□□□□ -1.22
CSB-PGBD3P0DP91 PREPL-201ENST00000260648 3672 ntAPPRIS P1 TSL 1 (best) BASIC7.46□□□□□ -1.22
CSB-PGBD3P0DP91 ZNF26-202ENST00000534834 4853 ntAPPRIS ALT2 TSL 2 BASIC7.46□□□□□ -1.22
CSB-PGBD3P0DP91 MYBPC1-209ENST00000547509 3749 ntAPPRIS ALT2 TSL 5 BASIC7.46□□□□□ -1.22
CSB-PGBD3P0DP91 DCN-202ENST00000393155 2133 ntAPPRIS P1 TSL 1 (best) BASIC7.46□□□□□ -1.22
CSB-PGBD3P0DP91 ARL14EPL-201ENST00000601302 1914 ntAPPRIS P1 TSL 5 BASIC7.46□□□□□ -1.22
CSB-PGBD3P0DP91 ZNF780A-204ENST00000455521 3600 ntAPPRIS ALT2 TSL 5 BASIC7.46□□□□□ -1.22
CSB-PGBD3P0DP91 ESRRG-205ENST00000366937 5365 ntTSL 1 (best) BASIC7.46□□□□□ -1.22
CSB-PGBD3P0DP91 LINC01450-201ENST00000443406 3263 ntTSL 1 (best) BASIC7.46□□□□□ -1.22
CSB-PGBD3P0DP91 SOS1-201ENST00000395038 4123 ntAPPRIS ALT2 TSL 5 BASIC7.46□□□□□ -1.22
CSB-PGBD3P0DP91 TESPA1-212ENST00000532804 2000 ntAPPRIS ALT2 TSL 5 BASIC7.45□□□□□ -1.22
CSB-PGBD3P0DP91 TESPA1-203ENST00000524622 4188 ntAPPRIS ALT2 TSL 1 (best) BASIC7.45□□□□□ -1.22
CSB-PGBD3P0DP91 BPIFC-204ENST00000534972 1809 ntTSL 5 BASIC7.45□□□□□ -1.22
CSB-PGBD3P0DP91 NSD3-206ENST00000527502 4471 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
CSB-PGBD3P0DP91 DOCK9-216ENST00000627024 4096 ntTSL 2 BASIC7.45□□□□□ -1.22
CSB-PGBD3P0DP91 ST7-204ENST00000393444 2113 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
CSB-PGBD3P0DP91 DSC2-201ENST00000251081 4826 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
CSB-PGBD3P0DP91 ASAH2-203ENST00000443575 1942 ntTSL 5 BASIC7.45□□□□□ -1.22
CSB-PGBD3P0DP91 GRIA3-207ENST00000620443 4943 ntAPPRIS ALT1 TSL 1 (best) BASIC7.45□□□□□ -1.22
CSB-PGBD3P0DP91 DCC-202ENST00000412726 9525 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
CSB-PGBD3P0DP91 EXO1-208ENST00000518483 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC7.45□□□□□ -1.22
CSB-PGBD3P0DP91 LCA5L-201ENST00000288350 2416 ntAPPRIS P1 TSL 5 BASIC7.45□□□□□ -1.22
CSB-PGBD3P0DP91 DEFB128-201ENST00000334391 373 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
CSB-PGBD3P0DP91 RNU5F-7P-201ENST00000363696 115 ntBASIC7.45□□□□□ -1.22
CSB-PGBD3P0DP91 RNU6-501P-201ENST00000364072 100 ntBASIC7.45□□□□□ -1.22
CSB-PGBD3P0DP91 Y_RNA.402-201ENST00000383972 102 ntBASIC7.45□□□□□ -1.22
CSB-PGBD3P0DP91 AL121835.1-201ENST00000404250 354 ntBASIC7.45□□□□□ -1.22
CSB-PGBD3P0DP91 HMGB3P23-201ENST00000414981 585 ntBASIC7.45□□□□□ -1.22
CSB-PGBD3P0DP91 AC108681.1-202ENST00000417384 589 ntTSL 4 BASIC7.45□□□□□ -1.22
CSB-PGBD3P0DP91 AC092634.6-201ENST00000418558 192 ntBASIC7.45□□□□□ -1.22
CSB-PGBD3P0DP91 AC073333.1-201ENST00000418907 648 ntTSL 3 BASIC7.45□□□□□ -1.22
CSB-PGBD3P0DP91 AL157786.1-206ENST00000424422 551 ntTSL 3 BASIC7.45□□□□□ -1.22
CSB-PGBD3P0DP91 AC108075.1-201ENST00000424692 529 ntBASIC7.45□□□□□ -1.22
CSB-PGBD3P0DP91 FABP5P2-201ENST00000439042 408 ntBASIC7.45□□□□□ -1.22
CSB-PGBD3P0DP91 AC244505.5-201ENST00000443639 207 ntBASIC7.45□□□□□ -1.22
CSB-PGBD3P0DP91 AC092155.1-201ENST00000444672 573 ntTSL 4 BASIC7.45□□□□□ -1.22
CSB-PGBD3P0DP91 Z80107.2-201ENST00000445127 392 ntBASIC7.45□□□□□ -1.22
CSB-PGBD3P0DP91 NPM1P39-201ENST00000449818 867 ntBASIC7.45□□□□□ -1.22
CSB-PGBD3P0DP91 NDUFA5P7-201ENST00000452914 242 ntBASIC7.45□□□□□ -1.22
CSB-PGBD3P0DP91 NF1P3-201ENST00000457709 450 ntBASIC7.45□□□□□ -1.22
CSB-PGBD3P0DP91 RPL7P6-201ENST00000480903 738 ntBASIC7.45□□□□□ -1.22
CSB-PGBD3P0DP91 RPL7P42-201ENST00000481005 679 ntBASIC7.45□□□□□ -1.22
CSB-PGBD3P0DP91 GSTM1-206ENST00000483399 512 ntTSL 3 BASIC7.45□□□□□ -1.22
CSB-PGBD3P0DP91 GYPB-202ENST00000502664 521 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
CSB-PGBD3P0DP91 PDLIM1P4-201ENST00000504327 1006 ntBASIC7.45□□□□□ -1.22
CSB-PGBD3P0DP91 AC079226.2-201ENST00000509283 518 ntTSL 2 BASIC7.45□□□□□ -1.22
CSB-PGBD3P0DP91 IGLV3-24-201ENST00000517477 197 ntBASIC7.45□□□□□ -1.22
CSB-PGBD3P0DP91 AP003354.2-201ENST00000517983 563 ntTSL 4 BASIC7.45□□□□□ -1.22
CSB-PGBD3P0DP91 OR5D15P-201ENST00000531671 942 ntBASIC7.45□□□□□ -1.22
CSB-PGBD3P0DP91 AK6P1-201ENST00000540219 478 ntBASIC7.45□□□□□ -1.22
CSB-PGBD3P0DP91 AC091544.7-201ENST00000554000 240 ntTSL 3 BASIC7.45□□□□□ -1.22
CSB-PGBD3P0DP91 AC012404.1-201ENST00000560876 476 ntTSL 3 BASIC7.45□□□□□ -1.22
CSB-PGBD3P0DP91 TTN-AS1-228ENST00000589234 751 ntTSL 5 BASIC7.45□□□□□ -1.22
CSB-PGBD3P0DP91 AP001429.1-201ENST00000602568 530 ntBASIC7.45□□□□□ -1.22
CSB-PGBD3P0DP91 CT45A9-201ENST00000604569 770 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
CSB-PGBD3P0DP91 CT45A8-201ENST00000611438 770 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
CSB-PGBD3P0DP91 MIR6820-201ENST00000611508 62 ntBASIC7.45□□□□□ -1.22
CSB-PGBD3P0DP91 AC025574.2-201ENST00000615621 514 ntBASIC7.45□□□□□ -1.22
CSB-PGBD3P0DP91 AL355974.3-201ENST00000617383 467 ntBASIC7.45□□□□□ -1.22
CSB-PGBD3P0DP91 AC026634.1-201ENST00000634369 198 ntBASIC7.45□□□□□ -1.22
CSB-PGBD3P0DP91 ALG10B-201ENST00000308742 10253 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
CSB-PGBD3P0DP91 AL050403.1-201ENST00000448859 2006 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
CSB-PGBD3P0DP91 CHMP1B2P-202ENST00000614414 6813 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
CSB-PGBD3P0DP91 LMO3-225ENST00000541295 3498 ntTSL 2 BASIC7.45□□□□□ -1.22
CSB-PGBD3P0DP91 KCNJ1-206ENST00000440599 2539 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
CSB-PGBD3P0DP91 TRPC4-202ENST00000355779 2784 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
CSB-PGBD3P0DP91 NUP107-211ENST00000539906 3004 ntTSL 2 BASIC7.45□□□□□ -1.22
CSB-PGBD3P0DP91 CD96-203ENST00000438817 1565 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
CSB-PGBD3P0DP91 SMIM21-203ENST00000584508 2554 ntAPPRIS ALT2 TSL 1 (best) BASIC7.45□□□□□ -1.22
CSB-PGBD3P0DP91 AL022323.4-201ENST00000623980 13120 ntBASIC7.45□□□□□ -1.22
CSB-PGBD3P0DP91 CFHR4-204ENST00000608469 1601 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
CSB-PGBD3P0DP91 ZFYVE16-206ENST00000510158 6680 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
CSB-PGBD3P0DP91 ANKRD26P1-204ENST00000571006 4741 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
CSB-PGBD3P0DP91 MAPK10-297ENST00000641287 3725 ntAPPRIS P2 BASIC7.44□□□□□ -1.22
CSB-PGBD3P0DP91 MFSD8-239ENST00000641590 2479 ntBASIC7.44□□□□□ -1.22
CSB-PGBD3P0DP91 ADGRF5-201ENST00000265417 5668 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
CSB-PGBD3P0DP91 KIF1B-204ENST00000377086 10669 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
CSB-PGBD3P0DP91 UTS2-202ENST00000361696 559 ntAPPRIS ALT2 TSL 1 (best) BASIC7.44□□□□□ -1.22
CSB-PGBD3P0DP91 RNU6-115P-201ENST00000364310 107 ntBASIC7.44□□□□□ -1.22
CSB-PGBD3P0DP91 RNU6-534P-201ENST00000364877 106 ntBASIC7.44□□□□□ -1.22
CSB-PGBD3P0DP91 RNU1-43P-201ENST00000365052 165 ntBASIC7.44□□□□□ -1.22
CSB-PGBD3P0DP91 DEC1-201ENST00000374016 1251 ntAPPRIS P2 TSL 1 (best) BASIC7.44□□□□□ -1.22
CSB-PGBD3P0DP91 SNORA67-201ENST00000384423 137 ntBASIC7.44□□□□□ -1.22
CSB-PGBD3P0DP91 RNU6-1122P-201ENST00000384449 107 ntBASIC7.44□□□□□ -1.22
CSB-PGBD3P0DP91 RNA5SP339-201ENST00000390987 122 ntBASIC7.44□□□□□ -1.22
Retrieved 100 of 98,524 protein–RNA pairs in 80.1 ms