Protein–RNA interactions for Protein: P0C7W6

CCDC172, Coiled-coil domain-containing protein 172, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC172P0C7W6 LINC01578-206ENST00000555520 977 ntTSL 3 BASIC4.29□□□□□ -1.72
CCDC172P0C7W6 AC007496.1-201ENST00000565641 739 ntTSL 3 BASIC4.29□□□□□ -1.72
CCDC172P0C7W6 LINC02079-201ENST00000582518 294 ntTSL 2 BASIC4.29□□□□□ -1.72
CCDC172P0C7W6 DYNAP-202ENST00000585973 1102 ntAPPRIS ALT2 TSL 3 BASIC4.29□□□□□ -1.72
CCDC172P0C7W6 AC010680.4-201ENST00000605334 543 ntBASIC4.29□□□□□ -1.72
CCDC172P0C7W6 LINC01709-202ENST00000635702 1204 ntTSL 5 BASIC4.29□□□□□ -1.72
CCDC172P0C7W6 OR5BE1P-202ENST00000641168 1176 ntBASIC4.29□□□□□ -1.72
CCDC172P0C7W6 ZNF594-201ENST00000399604 4862 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
CCDC172P0C7W6 RIOK3P1-201ENST00000418778 1528 ntBASIC4.29□□□□□ -1.72
CCDC172P0C7W6 PCAT4-201ENST00000504263 2091 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
CCDC172P0C7W6 LINC00648-202ENST00000555985 2885 ntTSL 2 BASIC4.29□□□□□ -1.72
CCDC172P0C7W6 LINC02456-201ENST00000635615 1323 ntTSL 5 BASIC4.28□□□□□ -1.72
CCDC172P0C7W6 FZD3-201ENST00000240093 13736 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
CCDC172P0C7W6 MACF1-204ENST00000372915 23440 ntAPPRIS ALT2 TSL 5 BASIC4.28□□□□□ -1.72
CCDC172P0C7W6 OR52N4-201ENST00000317254 1037 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
CCDC172P0C7W6 C1orf100-202ENST00000366537 483 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
CCDC172P0C7W6 MIR320B1-201ENST00000390209 79 ntBASIC4.28□□□□□ -1.72
CCDC172P0C7W6 AC079630.1-201ENST00000412812 585 ntTSL 4 BASIC4.28□□□□□ -1.72
CCDC172P0C7W6 PSMA4-202ENST00000413382 1019 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
CCDC172P0C7W6 AF178030.1-201ENST00000415088 402 ntTSL 2 BASIC4.28□□□□□ -1.72
CCDC172P0C7W6 RPL30P3-201ENST00000424262 333 ntBASIC4.28□□□□□ -1.72
CCDC172P0C7W6 AC093581.1-202ENST00000430890 391 ntTSL 2 BASIC4.28□□□□□ -1.72
CCDC172P0C7W6 MRPL50P1-201ENST00000431951 384 ntBASIC4.28□□□□□ -1.72
CCDC172P0C7W6 MTCYBP31-201ENST00000438855 1122 ntBASIC4.28□□□□□ -1.72
CCDC172P0C7W6 AL500522.2-201ENST00000448562 343 ntBASIC4.28□□□□□ -1.72
CCDC172P0C7W6 TAF8-207ENST00000482432 556 ntTSL 2 BASIC4.28□□□□□ -1.72
CCDC172P0C7W6 AL035404.1-201ENST00000497982 568 ntBASIC4.28□□□□□ -1.72
CCDC172P0C7W6 THAP6-203ENST00000502620 582 ntTSL 3 BASIC4.28□□□□□ -1.72
CCDC172P0C7W6 Vault.1-201ENST00000516474 102 ntBASIC4.28□□□□□ -1.72
CCDC172P0C7W6 CDH12P4-201ENST00000517835 295 ntBASIC4.28□□□□□ -1.72
CCDC172P0C7W6 CDH12P3-201ENST00000517935 295 ntBASIC4.28□□□□□ -1.72
CCDC172P0C7W6 CDH12P1-201ENST00000518435 295 ntBASIC4.28□□□□□ -1.72
CCDC172P0C7W6 AC022790.1-201ENST00000522872 204 ntBASIC4.28□□□□□ -1.72
CCDC172P0C7W6 AP003730.1-201ENST00000524605 285 ntBASIC4.28□□□□□ -1.72
CCDC172P0C7W6 THEM7P-202ENST00000525689 764 ntTSL 3 BASIC4.28□□□□□ -1.72
CCDC172P0C7W6 AC073655.2-202ENST00000547927 401 ntTSL 3 BASIC4.28□□□□□ -1.72
CCDC172P0C7W6 LINC02301-201ENST00000553760 773 ntTSL 3 BASIC4.28□□□□□ -1.72
CCDC172P0C7W6 NPM1P47-201ENST00000560843 856 ntBASIC4.28□□□□□ -1.72
CCDC172P0C7W6 NR2F2-AS1-211ENST00000561402 589 ntTSL 3 BASIC4.28□□□□□ -1.72
CCDC172P0C7W6 AC012186.2-201ENST00000569353 321 ntTSL 3 BASIC4.28□□□□□ -1.72
CCDC172P0C7W6 MIR4284-201ENST00000578924 81 ntBASIC4.28□□□□□ -1.72
CCDC172P0C7W6 AC011524.1-201ENST00000590167 240 ntTSL 3 BASIC4.28□□□□□ -1.72
CCDC172P0C7W6 ZNF432-203ENST00000597273 624 ntTSL 2 BASIC4.28□□□□□ -1.72
CCDC172P0C7W6 AC007687.1-201ENST00000602704 304 ntBASIC4.28□□□□□ -1.72
CCDC172P0C7W6 uc_338.9-201ENST00000617424 182 ntBASIC4.28□□□□□ -1.72
CCDC172P0C7W6 ARHGAP28-202ENST00000314319 5415 ntAPPRIS P2 TSL 5 BASIC4.28□□□□□ -1.72
CCDC172P0C7W6 HGF-202ENST00000354224 1425 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
CCDC172P0C7W6 ADAT2-203ENST00000606514 6651 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
CCDC172P0C7W6 CEP170-202ENST00000366542 6828 ntAPPRIS P1 TSL 5 BASIC4.28□□□□□ -1.72
CCDC172P0C7W6 PALMD-205ENST00000615664 1844 ntTSL 5 BASIC4.28□□□□□ -1.72
CCDC172P0C7W6 WDR49-201ENST00000308378 2594 ntAPPRIS P2 TSL 1 (best) BASIC4.27□□□□□ -1.73
CCDC172P0C7W6 PCDH15-218ENST00000437009 6804 ntTSL 5 BASIC4.27□□□□□ -1.73
CCDC172P0C7W6 TTC41P-203ENST00000548527 1475 ntTSL 5 BASIC4.27□□□□□ -1.73
CCDC172P0C7W6 RAD1P1-201ENST00000231383 813 ntBASIC4.27□□□□□ -1.73
CCDC172P0C7W6 AC136624.1-201ENST00000400791 413 ntBASIC4.27□□□□□ -1.73
CCDC172P0C7W6 RN7SKP33-201ENST00000410942 340 ntBASIC4.27□□□□□ -1.73
CCDC172P0C7W6 ZNRF3-IT1-201ENST00000412798 674 ntTSL 5 BASIC4.27□□□□□ -1.73
CCDC172P0C7W6 RPA2P2-201ENST00000419698 796 ntBASIC4.27□□□□□ -1.73
CCDC172P0C7W6 LINC01389-201ENST00000420876 483 ntTSL 3 BASIC4.27□□□□□ -1.73
CCDC172P0C7W6 COX6CP15-201ENST00000426313 211 ntBASIC4.27□□□□□ -1.73
CCDC172P0C7W6 IFNNP1-201ENST00000429219 553 ntBASIC4.27□□□□□ -1.73
CCDC172P0C7W6 TXNP1-201ENST00000441872 371 ntBASIC4.27□□□□□ -1.73
CCDC172P0C7W6 CYP3A43-210ENST00000444905 733 ntTSL 5 BASIC4.27□□□□□ -1.73
CCDC172P0C7W6 Z99127.1-202ENST00000448686 526 ntTSL 2 BASIC4.27□□□□□ -1.73
CCDC172P0C7W6 DNAJC19P1-201ENST00000455312 319 ntBASIC4.27□□□□□ -1.73
CCDC172P0C7W6 AL645608.2-201ENST00000458555 471 ntTSL 2 BASIC4.27□□□□□ -1.73
CCDC172P0C7W6 RN7SL93P-201ENST00000463035 293 ntBASIC4.27□□□□□ -1.73
CCDC172P0C7W6 AC004801.2-202ENST00000463559 283 ntBASIC4.27□□□□□ -1.73
CCDC172P0C7W6 AP000873.1-201ENST00000463987 400 ntBASIC4.27□□□□□ -1.73
CCDC172P0C7W6 SNX5P1-201ENST00000505757 1041 ntBASIC4.27□□□□□ -1.73
CCDC172P0C7W6 SPINK13-203ENST00000512953 1022 ntAPPRIS P2 TSL 2 BASIC4.27□□□□□ -1.73
CCDC172P0C7W6 AC021733.1-201ENST00000519786 325 ntTSL 3 BASIC4.27□□□□□ -1.73
CCDC172P0C7W6 AC087672.2-201ENST00000522498 429 ntTSL 2 BASIC4.27□□□□□ -1.73
CCDC172P0C7W6 AC113192.1-201ENST00000527270 321 ntTSL 3 BASIC4.27□□□□□ -1.73
CCDC172P0C7W6 CR383656.6-201ENST00000550518 394 ntBASIC4.27□□□□□ -1.73
CCDC172P0C7W6 AC106745.1-201ENST00000566798 464 ntTSL 2 BASIC4.27□□□□□ -1.73
CCDC172P0C7W6 EIF1P6-201ENST00000600054 334 ntBASIC4.27□□□□□ -1.73
CCDC172P0C7W6 AC068790.4-201ENST00000602474 263 ntBASIC4.27□□□□□ -1.73
CCDC172P0C7W6 AL662844.3-201ENST00000606909 517 ntTSL 5 BASIC4.27□□□□□ -1.73
CCDC172P0C7W6 AL450489.1-201ENST00000612071 468 ntBASIC4.27□□□□□ -1.73
CCDC172P0C7W6 AC244472.2-201ENST00000617639 406 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
CCDC172P0C7W6 XIST_intron.1-201ENST00000619444 68 ntBASIC4.27□□□□□ -1.73
CCDC172P0C7W6 LINC01002-236ENST00000634022 378 ntTSL 5 BASIC4.27□□□□□ -1.73
CCDC172P0C7W6 RNF111-206ENST00000559209 5278 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
CCDC172P0C7W6 WNK3-205ENST00000620763 5400 ntTSL 5 BASIC4.27□□□□□ -1.73
CCDC172P0C7W6 BCLAF1-213ENST00000530767 4186 ntAPPRIS ALT2 TSL 1 (best) BASIC4.27□□□□□ -1.73
CCDC172P0C7W6 TLR10-206ENST00000508334 2616 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
CCDC172P0C7W6 RGPD4-201ENST00000408999 5464 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
CCDC172P0C7W6 ZNF345-213ENST00000589046 3120 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
CCDC172P0C7W6 SUCNR1-201ENST00000362032 4181 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
CCDC172P0C7W6 SEPT7P7-201ENST00000420492 1301 ntBASIC4.26□□□□□ -1.73
CCDC172P0C7W6 AC018462.1-201ENST00000425966 1684 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
CCDC172P0C7W6 AL118496.1-201ENST00000440201 1812 ntBASIC4.26□□□□□ -1.73
CCDC172P0C7W6 MIR181A1HG-203ENST00000436880 2308 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
CCDC172P0C7W6 PIGN-210ENST00000588571 1960 ntTSL 5 BASIC4.26□□□□□ -1.73
CCDC172P0C7W6 RNU6-532P-201ENST00000384318 107 ntBASIC4.26□□□□□ -1.73
CCDC172P0C7W6 RNU11-4P-201ENST00000391149 133 ntBASIC4.26□□□□□ -1.73
CCDC172P0C7W6 TPT1P2-201ENST00000413105 503 ntBASIC4.26□□□□□ -1.73
CCDC172P0C7W6 NAP1L1P2-201ENST00000414182 1089 ntBASIC4.26□□□□□ -1.73
CCDC172P0C7W6 RPL26P29-201ENST00000415623 438 ntBASIC4.26□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 79.2 ms