Protein–RNA interactions for Protein: P09630

HOXC6, Homeobox protein Hox-C6, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6P09630 OR8F1P-201ENST00000425243 930 ntBASIC4.87□□□□□ -1.63
HOXC6P09630 AC005828.1-201ENST00000431604 524 ntTSL 5 BASIC4.87□□□□□ -1.63
HOXC6P09630 ARHGEF7-AS1-201ENST00000435037 321 ntTSL 3 BASIC4.87□□□□□ -1.63
HOXC6P09630 MTCYBP29-201ENST00000436327 1006 ntBASIC4.87□□□□□ -1.63
HOXC6P09630 AL512271.1-201ENST00000439878 434 ntTSL 3 BASIC4.87□□□□□ -1.63
HOXC6P09630 AC006333.1-202ENST00000440504 555 ntTSL 4 BASIC4.87□□□□□ -1.63
HOXC6P09630 VN1R25P-201ENST00000443385 738 ntBASIC4.87□□□□□ -1.63
HOXC6P09630 DDX39BP2-208ENST00000453923 258 ntBASIC4.87□□□□□ -1.63
HOXC6P09630 RNA5SP246-201ENST00000458909 119 ntBASIC4.87□□□□□ -1.63
HOXC6P09630 LINC02045-201ENST00000460324 679 ntTSL 3 BASIC4.87□□□□□ -1.63
HOXC6P09630 NAP1L1P3-201ENST00000462291 880 ntBASIC4.87□□□□□ -1.63
HOXC6P09630 RPL7L1P8-201ENST00000469911 741 ntBASIC4.87□□□□□ -1.63
HOXC6P09630 ATP6V1G1P6-201ENST00000504007 334 ntBASIC4.87□□□□□ -1.63
HOXC6P09630 AC026719.1-201ENST00000506059 456 ntTSL 3 BASIC4.87□□□□□ -1.63
HOXC6P09630 AC139718.2-201ENST00000506068 481 ntTSL 3 BASIC4.87□□□□□ -1.63
HOXC6P09630 HMMR-AS1-202ENST00000521666 800 ntTSL 2 BASIC4.87□□□□□ -1.63
HOXC6P09630 AC090739.1-201ENST00000522190 708 ntTSL 3 BASIC4.87□□□□□ -1.63
HOXC6P09630 AP000859.1-201ENST00000525536 307 ntBASIC4.87□□□□□ -1.63
HOXC6P09630 SNHG1-208ENST00000538266 347 ntTSL 3 BASIC4.87□□□□□ -1.63
HOXC6P09630 AC128707.1-201ENST00000552230 494 ntTSL 3 BASIC4.87□□□□□ -1.63
HOXC6P09630 C15orf41-203ENST00000562489 715 ntTSL 2 BASIC4.87□□□□□ -1.63
HOXC6P09630 AC009852.2-201ENST00000567898 485 ntBASIC4.87□□□□□ -1.63
HOXC6P09630 AC008088.1-201ENST00000580993 280 ntBASIC4.87□□□□□ -1.63
HOXC6P09630 MIR4472-2-201ENST00000582069 67 ntBASIC4.87□□□□□ -1.63
HOXC6P09630 AC103810.2-203ENST00000584959 631 ntTSL 5 BASIC4.87□□□□□ -1.63
HOXC6P09630 AC091132.5-204ENST00000586348 630 ntTSL 3 BASIC4.87□□□□□ -1.63
HOXC6P09630 AC016229.1-201ENST00000589242 487 ntTSL 5 BASIC4.87□□□□□ -1.63
HOXC6P09630 Z82195.1-201ENST00000604558 398 ntBASIC4.87□□□□□ -1.63
HOXC6P09630 AL139344.1-201ENST00000605228 195 ntBASIC4.87□□□□□ -1.63
HOXC6P09630 AC245100.7-201ENST00000609678 442 ntBASIC4.87□□□□□ -1.63
HOXC6P09630 C8orf89-201ENST00000613105 495 ntAPPRIS ALT2 TSL 1 (best) BASIC4.87□□□□□ -1.63
HOXC6P09630 AC007546.1-201ENST00000619452 559 ntBASIC4.87□□□□□ -1.63
HOXC6P09630 AL161616.2-201ENST00000622001 565 ntTSL 4 BASIC4.87□□□□□ -1.63
HOXC6P09630 AC004943.3-201ENST00000624116 600 ntBASIC4.87□□□□□ -1.63
HOXC6P09630 TATDN1-221ENST00000630259 915 ntTSL 5 BASIC4.87□□□□□ -1.63
HOXC6P09630 CRNDE-213ENST00000635991 546 ntTSL 5 BASIC4.87□□□□□ -1.63
HOXC6P09630 AC083865.1-201ENST00000636634 831 ntBASIC4.87□□□□□ -1.63
HOXC6P09630 NFIB-211ENST00000606230 2311 ntTSL 5 BASIC4.87□□□□□ -1.63
HOXC6P09630 UBR1-201ENST00000290650 7761 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
HOXC6P09630 NOL8P1-201ENST00000508336 3529 ntBASIC4.87□□□□□ -1.63
HOXC6P09630 KLRC1-202ENST00000359151 1407 ntAPPRIS P4 TSL 1 (best) BASIC4.87□□□□□ -1.63
HOXC6P09630 THEMIS-204ENST00000537166 3830 ntAPPRIS ALT2 TSL 2 BASIC4.87□□□□□ -1.63
HOXC6P09630 CASC17-201ENST00000569074 2059 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
HOXC6P09630 WDR7-201ENST00000254442 14083 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
HOXC6P09630 PTPRC-201ENST00000348564 4626 ntAPPRIS ALT2 TSL 1 (best) BASIC4.87□□□□□ -1.63
HOXC6P09630 TMEM255A-202ENST00000371352 2879 ntTSL 2 BASIC4.86□□□□□ -1.63
HOXC6P09630 MYO9A-209ENST00000564571 8111 ntAPPRIS ALT2 TSL 1 (best) BASIC4.86□□□□□ -1.63
HOXC6P09630 PDE7A-201ENST00000379419 2425 ntAPPRIS P3 TSL 2 BASIC4.86□□□□□ -1.63
HOXC6P09630 EMSY-207ENST00000525919 4074 ntAPPRIS ALT1 TSL 1 (best) BASIC4.86□□□□□ -1.63
HOXC6P09630 FAM169A-203ENST00000510496 5810 ntTSL 5 BASIC4.86□□□□□ -1.63
HOXC6P09630 MAPK10-353ENST00000641803 8483 ntAPPRIS P2 BASIC4.86□□□□□ -1.63
HOXC6P09630 DEFB106A-201ENST00000335186 303 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
HOXC6P09630 DEFB106B-201ENST00000335479 316 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
HOXC6P09630 RNU1-20P-201ENST00000363314 162 ntBASIC4.86□□□□□ -1.63
HOXC6P09630 SPRR2A-201ENST00000392653 709 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
HOXC6P09630 PTMAP2-201ENST00000397627 327 ntBASIC4.86□□□□□ -1.63
HOXC6P09630 HYKK-202ENST00000408962 847 ntTSL 5 BASIC4.86□□□□□ -1.63
HOXC6P09630 LINC00161-201ENST00000412526 870 ntTSL 2 BASIC4.86□□□□□ -1.63
HOXC6P09630 RPS20P14-201ENST00000412545 360 ntBASIC4.86□□□□□ -1.63
HOXC6P09630 LINC01065-201ENST00000417989 577 ntTSL 3 BASIC4.86□□□□□ -1.63
HOXC6P09630 AC007403.1-201ENST00000427579 567 ntTSL 4 BASIC4.86□□□□□ -1.63
HOXC6P09630 RPL7P2-201ENST00000427639 268 ntBASIC4.86□□□□□ -1.63
HOXC6P09630 ARAFP2-201ENST00000440565 559 ntBASIC4.86□□□□□ -1.63
HOXC6P09630 AL358794.1-201ENST00000445689 381 ntBASIC4.86□□□□□ -1.63
HOXC6P09630 BBIP1-206ENST00000447005 727 ntAPPRIS P1 TSL 2 BASIC4.86□□□□□ -1.63
HOXC6P09630 LMOD2-201ENST00000456238 918 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
HOXC6P09630 RPL35AP15-201ENST00000468042 339 ntBASIC4.86□□□□□ -1.63
HOXC6P09630 SYT14P1-201ENST00000481459 721 ntBASIC4.86□□□□□ -1.63
HOXC6P09630 AC134050.1-201ENST00000495088 933 ntBASIC4.86□□□□□ -1.63
HOXC6P09630 AC008696.2-201ENST00000503323 825 ntTSL 3 BASIC4.86□□□□□ -1.63
HOXC6P09630 AC010273.1-201ENST00000504129 946 ntTSL 5 BASIC4.86□□□□□ -1.63
HOXC6P09630 AC010460.1-201ENST00000507087 466 ntBASIC4.86□□□□□ -1.63
HOXC6P09630 AC105313.1-201ENST00000509121 353 ntBASIC4.86□□□□□ -1.63
HOXC6P09630 AC097478.1-204ENST00000509723 547 ntTSL 3 BASIC4.86□□□□□ -1.63
HOXC6P09630 LINC02465-204ENST00000514892 481 ntTSL 2 BASIC4.86□□□□□ -1.63
HOXC6P09630 LINC02353-201ENST00000515181 849 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
HOXC6P09630 AC018682.2-201ENST00000517716 399 ntTSL 5 BASIC4.86□□□□□ -1.63
HOXC6P09630 PCAT1-201ENST00000519319 734 ntTSL 2 BASIC4.86□□□□□ -1.63
HOXC6P09630 AC136475.4-201ENST00000534271 280 ntTSL 5 BASIC4.86□□□□□ -1.63
HOXC6P09630 UBE4A-203ENST00000545354 2149 ntTSL 2 BASIC4.86□□□□□ -1.63
HOXC6P09630 AC009803.1-201ENST00000551531 416 ntTSL 3 BASIC4.86□□□□□ -1.63
HOXC6P09630 AL390334.1-201ENST00000556395 450 ntBASIC4.86□□□□□ -1.63
HOXC6P09630 HYKK-203ENST00000563233 734 ntTSL 2 BASIC4.86□□□□□ -1.63
HOXC6P09630 AC027455.1-201ENST00000574104 594 ntBASIC4.86□□□□□ -1.63
HOXC6P09630 AC106796.1-201ENST00000577173 615 ntTSL 3 BASIC4.86□□□□□ -1.63
HOXC6P09630 AP002360.3-201ENST00000607673 710 ntBASIC4.86□□□□□ -1.63
HOXC6P09630 TMEM154-204ENST00000613578 486 ntAPPRIS ALT2 TSL 5 BASIC4.86□□□□□ -1.63
HOXC6P09630 AC091304.6-201ENST00000619761 202 ntBASIC4.86□□□□□ -1.63
HOXC6P09630 AC074140.1-201ENST00000621617 208 ntBASIC4.86□□□□□ -1.63
HOXC6P09630 VIPR1-AS1-223ENST00000627073 451 ntTSL 5 BASIC4.86□□□□□ -1.63
HOXC6P09630 AC107398.4-201ENST00000635489 765 ntTSL 2 BASIC4.86□□□□□ -1.63
HOXC6P09630 FP325313.1-201ENST00000638228 703 ntBASIC4.86□□□□□ -1.63
HOXC6P09630 SLC24A2-202ENST00000341998 10749 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
HOXC6P09630 SYNE2-203ENST00000357395 21555 ntTSL 5 BASIC4.86□□□□□ -1.63
HOXC6P09630 EED-203ENST00000351625 1696 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
HOXC6P09630 SLC17A1-204ENST00000476801 1704 ntAPPRIS P1 TSL 2 BASIC4.86□□□□□ -1.63
HOXC6P09630 DOCK7-219ENST00000635253 6423 ntAPPRIS ALT2 TSL 5 BASIC4.86□□□□□ -1.63
HOXC6P09630 AC128685.1-201ENST00000490357 1834 ntTSL 5 BASIC4.86□□□□□ -1.63
HOXC6P09630 ZNF90P1-201ENST00000480493 1951 ntBASIC4.85□□□□□ -1.63
HOXC6P09630 CTAGE5-208ENST00000553352 3441 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 100.3 ms