Protein–RNA interactions for Protein: P09429

HMGB1, High mobility group protein B1, humanhuman

Known RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P09429 AL049794.2-201ENST00000616301 365 ntBASIC5.91□□□□□ -1.46
HMGB1P09429 MIR6826-201ENST00000617808 98 ntBASIC5.91□□□□□ -1.46
HMGB1P09429 MIR6886-201ENST00000619864 61 ntBASIC5.91□□□□□ -1.46
HMGB1P09429 AC010608.3-201ENST00000625048 527 ntBASIC5.91□□□□□ -1.46
HMGB1P09429 MKKS-204ENST00000639674 192 ntBASIC5.91□□□□□ -1.46
HMGB1P09429 ECM1P2-201ENST00000503354 1577 ntBASIC5.91□□□□□ -1.46
HMGB1P09429 SON-204ENST00000381692 2463 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
HMGB1P09429 LYST-202ENST00000389794 12985 ntTSL 5 BASIC5.91□□□□□ -1.46
HMGB1P09429 CEP192-201ENST00000325971 7764 ntTSL 5 BASIC5.91□□□□□ -1.46
HMGB1P09429 GDI2P1-201ENST00000429312 1336 ntBASIC5.91□□□□□ -1.46
HMGB1P09429 OR6C3-202ENST00000641364 1341 ntAPPRIS P1 BASIC5.91□□□□□ -1.46
HMGB1P09429 FRYL-209ENST00000506685 1940 ntTSL 5 BASIC5.91□□□□□ -1.46
HMGB1P09429 EDA2R-202ENST00000374719 3418 ntAPPRIS P3 TSL 1 (best) BASIC5.91□□□□□ -1.46
HMGB1P09429 RIF1-203ENST00000428287 7722 ntAPPRIS ALT2 TSL 1 (best) BASIC5.91□□□□□ -1.46
HMGB1P09429 GABPAP-201ENST00000419271 1356 ntBASIC5.91□□□□□ -1.46
HMGB1P09429 AP001642.1-201ENST00000624727 2117 ntBASIC5.9□□□□□ -1.46
HMGB1P09429 SEL1L2-202ENST00000378072 1892 ntTSL 2 BASIC5.9□□□□□ -1.46
HMGB1P09429 OR1A2-201ENST00000381951 930 ntAPPRIS P1 BASIC5.9□□□□□ -1.46
HMGB1P09429 SNORA70.10-201ENST00000384515 134 ntBASIC5.9□□□□□ -1.46
HMGB1P09429 RPL31P1-201ENST00000398116 372 ntBASIC5.9□□□□□ -1.46
HMGB1P09429 AL161449.1-201ENST00000414531 1199 ntBASIC5.9□□□□□ -1.46
HMGB1P09429 QRSL1P2-201ENST00000418582 964 ntBASIC5.9□□□□□ -1.46
HMGB1P09429 MRPS36P1-201ENST00000421291 307 ntBASIC5.9□□□□□ -1.46
HMGB1P09429 AC006548.1-201ENST00000427470 102 ntBASIC5.9□□□□□ -1.46
HMGB1P09429 LINC01307-201ENST00000439146 474 ntTSL 3 BASIC5.9□□□□□ -1.46
HMGB1P09429 AC018467.1-203ENST00000440785 506 ntTSL 3 BASIC5.9□□□□□ -1.46
HMGB1P09429 IGKV2-30-201ENST00000468494 390 ntAPPRIS P1 BASIC5.9□□□□□ -1.46
HMGB1P09429 RN7SL799P-201ENST00000475891 298 ntBASIC5.9□□□□□ -1.46
HMGB1P09429 AC108734.3-201ENST00000481241 1165 ntBASIC5.9□□□□□ -1.46
HMGB1P09429 AC113347.3-201ENST00000509113 148 ntBASIC5.9□□□□□ -1.46
HMGB1P09429 RN7SKP244-201ENST00000516513 307 ntBASIC5.9□□□□□ -1.46
HMGB1P09429 RNA5SP43-201ENST00000516559 110 ntBASIC5.9□□□□□ -1.46
HMGB1P09429 RNA5SP34-201ENST00000516887 130 ntBASIC5.9□□□□□ -1.46
HMGB1P09429 Y_RNA.719-201ENST00000517156 106 ntBASIC5.9□□□□□ -1.46
HMGB1P09429 FBXO3-AS1-202ENST00000533046 386 ntTSL 3 BASIC5.9□□□□□ -1.46
HMGB1P09429 AC089983.1-201ENST00000549807 701 ntTSL 3 BASIC5.9□□□□□ -1.46
HMGB1P09429 AC025263.2-201ENST00000550437 548 ntAPPRIS P1 TSL 5 BASIC5.9□□□□□ -1.46
HMGB1P09429 JKAMP-212ENST00000556985 592 ntTSL 2 BASIC5.9□□□□□ -1.46
HMGB1P09429 AC023906.4-201ENST00000557898 895 ntTSL 3 BASIC5.9□□□□□ -1.46
HMGB1P09429 ALDH3A2-208ENST00000571163 590 ntTSL 5 BASIC5.9□□□□□ -1.46
HMGB1P09429 TVP23CP2-201ENST00000571473 623 ntBASIC5.9□□□□□ -1.46
HMGB1P09429 AC011509.1-201ENST00000589512 164 ntTSL 3 BASIC5.9□□□□□ -1.46
HMGB1P09429 VN1R83P-201ENST00000595685 445 ntBASIC5.9□□□□□ -1.46
HMGB1P09429 AC078899.5-201ENST00000612475 178 ntBASIC5.9□□□□□ -1.46
HMGB1P09429 AC018755.4-201ENST00000619715 454 ntBASIC5.9□□□□□ -1.46
HMGB1P09429 CR381572.1-201ENST00000625098 102 ntBASIC5.9□□□□□ -1.46
HMGB1P09429 ADAMTS9-AS1-210ENST00000625328 699 ntTSL 5 BASIC5.9□□□□□ -1.46
HMGB1P09429 LINC01739-205ENST00000641890 573 ntBASIC5.9□□□□□ -1.46
HMGB1P09429 FAM91A3P-201ENST00000456826 2544 ntBASIC5.9□□□□□ -1.47
HMGB1P09429 IL13RA2-201ENST00000243213 1371 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.47
HMGB1P09429 MTND4P10-201ENST00000446199 1363 ntBASIC5.9□□□□□ -1.47
HMGB1P09429 GLCE-201ENST00000261858 5037 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.47
HMGB1P09429 MPDZ-204ENST00000381022 7589 ntAPPRIS ALT2 TSL 5 BASIC5.9□□□□□ -1.47
HMGB1P09429 RASA1-205ENST00000512763 3060 ntAPPRIS ALT2 TSL 2 BASIC5.9□□□□□ -1.47
HMGB1P09429 INPP4B-201ENST00000262992 3741 ntAPPRIS P1 TSL 5 BASIC5.89□□□□□ -1.47
HMGB1P09429 EIF2A-201ENST00000273435 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC5.89□□□□□ -1.47
HMGB1P09429 NUP58P1-201ENST00000502546 1738 ntBASIC5.89□□□□□ -1.47
HMGB1P09429 SYTL2-213ENST00000525702 2727 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
HMGB1P09429 KLHL13-203ENST00000371878 3234 ntTSL 2 BASIC5.89□□□□□ -1.47
HMGB1P09429 OR4E1-202ENST00000641792 3742 ntAPPRIS P5 BASIC5.89□□□□□ -1.47
HMGB1P09429 EIF2AK3-203ENST00000419748 4222 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
HMGB1P09429 BAZ2B-204ENST00000392783 8289 ntAPPRIS P1 TSL 5 BASIC5.89□□□□□ -1.47
HMGB1P09429 RNA5SP502-201ENST00000362694 119 ntBASIC5.89□□□□□ -1.47
HMGB1P09429 SNORA51.1-201ENST00000363243 140 ntBASIC5.89□□□□□ -1.47
HMGB1P09429 RNU5D-1-201ENST00000363299 116 ntBASIC5.89□□□□□ -1.47
HMGB1P09429 SNORA51.2-201ENST00000364595 132 ntBASIC5.89□□□□□ -1.47
HMGB1P09429 RNU6-1181P-201ENST00000384191 106 ntBASIC5.89□□□□□ -1.47
HMGB1P09429 Y_RNA.472-201ENST00000384322 102 ntBASIC5.89□□□□□ -1.47
HMGB1P09429 SNRPEP2-201ENST00000397592 279 ntBASIC5.89□□□□□ -1.47
HMGB1P09429 C1GALT1-202ENST00000402468 930 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
HMGB1P09429 AL021331.1-201ENST00000402817 582 ntBASIC5.89□□□□□ -1.47
HMGB1P09429 LUZP4P1-201ENST00000415420 344 ntBASIC5.89□□□□□ -1.47
HMGB1P09429 AL391219.1-201ENST00000422570 483 ntBASIC5.89□□□□□ -1.47
HMGB1P09429 RPL21P66-201ENST00000426566 466 ntBASIC5.89□□□□□ -1.47
HMGB1P09429 AL353689.2-201ENST00000433837 440 ntTSL 3 BASIC5.89□□□□□ -1.47
HMGB1P09429 AL390879.2-204ENST00000438602 582 ntTSL 3 BASIC5.89□□□□□ -1.47
HMGB1P09429 PTMAP6-201ENST00000439110 327 ntBASIC5.89□□□□□ -1.47
HMGB1P09429 AC012512.1-201ENST00000446594 718 ntBASIC5.89□□□□□ -1.47
HMGB1P09429 RPL5P24-201ENST00000463742 885 ntBASIC5.89□□□□□ -1.47
HMGB1P09429 AC104164.3-201ENST00000467363 1258 ntBASIC5.89□□□□□ -1.47
HMGB1P09429 AL365356.5-201ENST00000478294 697 ntTSL 2 BASIC5.89□□□□□ -1.47
HMGB1P09429 TMED11P-201ENST00000479478 690 ntBASIC5.89□□□□□ -1.47
HMGB1P09429 CASP12-210ENST00000494737 961 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
HMGB1P09429 KLRA1P-201ENST00000503499 986 ntBASIC5.89□□□□□ -1.47
HMGB1P09429 AC119150.1-201ENST00000507143 563 ntTSL 2 BASIC5.89□□□□□ -1.47
HMGB1P09429 AC119751.4-201ENST00000507498 357 ntBASIC5.89□□□□□ -1.47
HMGB1P09429 AC113420.1-201ENST00000507903 571 ntBASIC5.89□□□□□ -1.47
HMGB1P09429 AC096759.1-201ENST00000510744 473 ntTSL 3 BASIC5.89□□□□□ -1.47
HMGB1P09429 VWA8P1-201ENST00000510889 176 ntBASIC5.89□□□□□ -1.47
HMGB1P09429 GYPA-208ENST00000512064 441 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
HMGB1P09429 ENPP7P9-201ENST00000514456 627 ntBASIC5.89□□□□□ -1.47
HMGB1P09429 LINC02553-201ENST00000529088 734 ntTSL 5 BASIC5.89□□□□□ -1.47
HMGB1P09429 LINC02442-202ENST00000540761 382 ntTSL 2 BASIC5.89□□□□□ -1.47
HMGB1P09429 AC006065.3-201ENST00000541769 419 ntTSL 5 BASIC5.89□□□□□ -1.47
HMGB1P09429 AC068643.2-201ENST00000547418 852 ntTSL 5 BASIC5.89□□□□□ -1.47
HMGB1P09429 AC004801.3-201ENST00000547602 962 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
HMGB1P09429 HAUS8P1-201ENST00000549005 542 ntBASIC5.89□□□□□ -1.47
HMGB1P09429 AC010551.2-201ENST00000569200 416 ntTSL 3 BASIC5.89□□□□□ -1.47
HMGB1P09429 AC131274.1-201ENST00000582507 254 ntTSL 3 BASIC5.89□□□□□ -1.47
HMGB1P09429 AC006116.3-201ENST00000592968 361 ntBASIC5.89□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 122.6 ms