Protein–RNA interactions for Protein: P08254

MMP3, Stromelysin-1, humanhuman

Predictions only

Length 477 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP3P08254 OR51A2-201ENST00000380371 942 ntAPPRIS P1 BASIC4.84□□□□□ -1.63
MMP3P08254 RNU6-224P-201ENST00000384055 107 ntBASIC4.84□□□□□ -1.63
MMP3P08254 RPL32P23-201ENST00000397237 405 ntBASIC4.84□□□□□ -1.63
MMP3P08254 MIR921-201ENST00000401133 56 ntBASIC4.84□□□□□ -1.63
MMP3P08254 DNAJC19P6-201ENST00000401853 280 ntBASIC4.84□□□□□ -1.63
MMP3P08254 RNA5SP36-201ENST00000410197 133 ntBASIC4.84□□□□□ -1.63
MMP3P08254 RN7SKP235-201ENST00000410662 305 ntBASIC4.84□□□□□ -1.63
MMP3P08254 GPC5-IT1-201ENST00000416664 658 ntTSL 3 BASIC4.84□□□□□ -1.63
MMP3P08254 AL356095.1-201ENST00000417217 199 ntBASIC4.84□□□□□ -1.63
MMP3P08254 KRR1P1-201ENST00000419430 803 ntBASIC4.84□□□□□ -1.63
MMP3P08254 AC062016.2-201ENST00000420950 676 ntBASIC4.84□□□□□ -1.63
MMP3P08254 OR2AH1P-201ENST00000425717 928 ntBASIC4.84□□□□□ -1.63
MMP3P08254 YWHAEP5-201ENST00000431545 765 ntBASIC4.84□□□□□ -1.63
MMP3P08254 AC005828.1-201ENST00000431604 524 ntTSL 5 BASIC4.84□□□□□ -1.63
MMP3P08254 CR769776.1-201ENST00000441254 787 ntBASIC4.84□□□□□ -1.63
MMP3P08254 AL512326.1-201ENST00000443050 721 ntBASIC4.84□□□□□ -1.63
MMP3P08254 RPS26P30-201ENST00000443431 335 ntBASIC4.84□□□□□ -1.63
MMP3P08254 AC064871.1-201ENST00000444562 427 ntTSL 3 BASIC4.84□□□□□ -1.63
MMP3P08254 Z77249.1-201ENST00000444622 1175 ntBASIC4.84□□□□□ -1.63
MMP3P08254 ARL5AP2-201ENST00000444698 533 ntBASIC4.84□□□□□ -1.63
MMP3P08254 AL139275.2-201ENST00000444731 539 ntTSL 3 BASIC4.84□□□□□ -1.63
MMP3P08254 LINC00440-201ENST00000446579 734 ntTSL 5 BASIC4.84□□□□□ -1.63
MMP3P08254 MTCYBP11-201ENST00000447254 1109 ntBASIC4.84□□□□□ -1.63
MMP3P08254 AC092685.1-201ENST00000447960 1243 ntBASIC4.84□□□□□ -1.63
MMP3P08254 DDX39BP2-208ENST00000453923 258 ntBASIC4.84□□□□□ -1.63
MMP3P08254 RNU7-140P-201ENST00000459546 60 ntBASIC4.84□□□□□ -1.63
MMP3P08254 RPL35AP15-201ENST00000468042 339 ntBASIC4.84□□□□□ -1.63
MMP3P08254 PLSCR5-202ENST00000482567 1018 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
MMP3P08254 AC079203.1-201ENST00000487972 404 ntBASIC4.84□□□□□ -1.63
MMP3P08254 AC069444.1-201ENST00000489428 266 ntTSL 3 BASIC4.84□□□□□ -1.63
MMP3P08254 AC099509.1-201ENST00000502437 652 ntTSL 2 BASIC4.84□□□□□ -1.63
MMP3P08254 AC092546.1-202ENST00000505628 499 ntTSL 2 BASIC4.84□□□□□ -1.63
MMP3P08254 MEF2C-AS1-208ENST00000512585 741 ntTSL 5 BASIC4.84□□□□□ -1.63
MMP3P08254 RPS27AP18-201ENST00000515536 459 ntBASIC4.84□□□□□ -1.63
MMP3P08254 LRRC37A5P-202ENST00000536054 1095 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
MMP3P08254 OR4U1P-201ENST00000554958 912 ntBASIC4.84□□□□□ -1.63
MMP3P08254 AC009101.2-201ENST00000564293 456 ntTSL 3 BASIC4.84□□□□□ -1.63
MMP3P08254 AC023824.3-201ENST00000569003 562 ntBASIC4.84□□□□□ -1.63
MMP3P08254 HMGB2P1-201ENST00000591146 634 ntBASIC4.84□□□□□ -1.63
MMP3P08254 MTND3P19-201ENST00000603825 345 ntBASIC4.84□□□□□ -1.63
MMP3P08254 AC002487.1-201ENST00000604565 994 ntBASIC4.84□□□□□ -1.63
MMP3P08254 AP002360.3-201ENST00000607673 710 ntBASIC4.84□□□□□ -1.63
MMP3P08254 FAM27D1-201ENST00000612308 341 ntBASIC4.84□□□□□ -1.63
MMP3P08254 AL021997.2-201ENST00000615674 271 ntBASIC4.84□□□□□ -1.63
MMP3P08254 AC022079.1-201ENST00000621546 602 ntBASIC4.84□□□□□ -1.63
MMP3P08254 AC138907.10-201ENST00000623708 983 ntBASIC4.84□□□□□ -1.63
MMP3P08254 AC145207.9-201ENST00000623802 325 ntBASIC4.84□□□□□ -1.63
MMP3P08254 FP325313.1-201ENST00000638228 703 ntBASIC4.84□□□□□ -1.63
MMP3P08254 USP29-202ENST00000598197 3284 ntAPPRIS P1 BASIC4.84□□□□□ -1.63
MMP3P08254 ZNF382-204ENST00000439428 2742 ntAPPRIS ALT2 TSL 1 (best) BASIC4.84□□□□□ -1.63
MMP3P08254 PHTF2-208ENST00000450574 2516 ntTSL 1 (best) BASIC4.84□□□□□ -1.64
MMP3P08254 CCSER2-210ENST00000543283 5888 ntTSL 2 BASIC4.84□□□□□ -1.64
MMP3P08254 POU2F1-212ENST00000541643 13937 ntAPPRIS ALT2 TSL 1 (best) BASIC4.84□□□□□ -1.64
MMP3P08254 PPP1R9A-207ENST00000433881 9928 ntAPPRIS P1 TSL 5 BASIC4.84□□□□□ -1.64
MMP3P08254 TMEM71-210ENST00000523829 1974 ntAPPRIS ALT2 TSL 5 BASIC4.84□□□□□ -1.64
MMP3P08254 CYLD-212ENST00000568704 3292 ntTSL 5 BASIC4.84□□□□□ -1.64
MMP3P08254 FGF13-202ENST00000315930 19519 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
MMP3P08254 GHR-202ENST00000357703 4316 ntTSL 5 BASIC4.83□□□□□ -1.64
MMP3P08254 GHR-213ENST00000622294 4312 ntTSL 5 BASIC4.83□□□□□ -1.64
MMP3P08254 TM4SF18-201ENST00000296059 3852 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
MMP3P08254 AC092447.5-201ENST00000429367 2741 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
MMP3P08254 AL138828.1-203ENST00000419926 1570 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
MMP3P08254 USP45-204ENST00000369233 2514 ntTSL 5 BASIC4.83□□□□□ -1.64
MMP3P08254 CLVS1-201ENST00000325897 3486 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
MMP3P08254 PIK3CB-214ENST00000544716 3181 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
MMP3P08254 OR8G1-201ENST00000341493 936 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
MMP3P08254 RNU6-543P-201ENST00000362576 108 ntBASIC4.83□□□□□ -1.64
MMP3P08254 RNA5SP175-201ENST00000364275 119 ntBASIC4.83□□□□□ -1.64
MMP3P08254 RNU4-68P-201ENST00000364314 141 ntBASIC4.83□□□□□ -1.64
MMP3P08254 MIR320B1-201ENST00000390209 79 ntBASIC4.83□□□□□ -1.64
MMP3P08254 TRAV14DV4-201ENST00000390440 425 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
MMP3P08254 AC104297.1-201ENST00000393779 870 ntBASIC4.83□□□□□ -1.64
MMP3P08254 OR8G2P-201ENST00000412796 908 ntBASIC4.83□□□□□ -1.64
MMP3P08254 RPS3AP37-201ENST00000419176 745 ntBASIC4.83□□□□□ -1.64
MMP3P08254 COX6B1P7-201ENST00000430845 235 ntBASIC4.83□□□□□ -1.64
MMP3P08254 AL139294.1-201ENST00000435739 512 ntTSL 2 BASIC4.83□□□□□ -1.64
MMP3P08254 AL353093.1-201ENST00000441292 436 ntBASIC4.83□□□□□ -1.64
MMP3P08254 MTATP6P26-201ENST00000445926 662 ntBASIC4.83□□□□□ -1.64
MMP3P08254 AC068135.1-201ENST00000446164 246 ntBASIC4.83□□□□□ -1.64
MMP3P08254 Z73417.1-201ENST00000447373 778 ntBASIC4.83□□□□□ -1.64
MMP3P08254 AL591363.1-201ENST00000450091 483 ntBASIC4.83□□□□□ -1.64
MMP3P08254 VN1R32P-201ENST00000452234 905 ntBASIC4.83□□□□□ -1.64
MMP3P08254 SNORA84-201ENST00000459229 133 ntBASIC4.83□□□□□ -1.64
MMP3P08254 RPL7P48-201ENST00000461513 746 ntBASIC4.83□□□□□ -1.64
MMP3P08254 AL592156.1-201ENST00000508758 304 ntBASIC4.83□□□□□ -1.64
MMP3P08254 AP001636.3-202ENST00000525714 894 ntTSL 3 BASIC4.83□□□□□ -1.64
MMP3P08254 OSBPL9P2-201ENST00000526582 1228 ntBASIC4.83□□□□□ -1.64
MMP3P08254 AC008083.2-201ENST00000546707 476 ntBASIC4.83□□□□□ -1.64
MMP3P08254 LINC02294-201ENST00000549330 497 ntTSL 2 BASIC4.83□□□□□ -1.64
MMP3P08254 AC026992.1-202ENST00000558454 421 ntTSL 3 BASIC4.83□□□□□ -1.64
MMP3P08254 AC022929.1-201ENST00000560675 823 ntTSL 3 BASIC4.83□□□□□ -1.64
MMP3P08254 CYP2C60P-201ENST00000566088 139 ntBASIC4.83□□□□□ -1.64
MMP3P08254 MIR548Y-201ENST00000582739 110 ntBASIC4.83□□□□□ -1.64
MMP3P08254 AC006270.1-201ENST00000582889 478 ntTSL 3 BASIC4.83□□□□□ -1.64
MMP3P08254 AC011477.2-201ENST00000590697 921 ntTSL 2 BASIC4.83□□□□□ -1.64
MMP3P08254 CCDC58P3-201ENST00000590792 430 ntBASIC4.83□□□□□ -1.64
MMP3P08254 CT45A3-201ENST00000597510 1076 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
MMP3P08254 AL160290.3-201ENST00000604869 165 ntBASIC4.83□□□□□ -1.64
MMP3P08254 CT45A2-201ENST00000605791 1076 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
MMP3P08254 MIR6867-201ENST00000610636 67 ntBASIC4.83□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 107.4 ms