Protein–RNA interactions for Protein: P06400

RB1, Retinoblastoma-associated protein, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RB1P06400 SCP2-206ENST00000430330 938 ntTSL 2 BASIC4.75□□□□□ -1.65
RB1P06400 AC002542.1-201ENST00000440683 193 ntBASIC4.75□□□□□ -1.65
RB1P06400 AC092809.1-201ENST00000441469 474 ntBASIC4.75□□□□□ -1.65
RB1P06400 RPL29-203ENST00000475248 551 ntAPPRIS P1 TSL 3 BASIC4.75□□□□□ -1.65
RB1P06400 VPS13A-211ENST00000484581 1155 ntTSL 2 BASIC4.75□□□□□ -1.65
RB1P06400 SUMO2P5-201ENST00000506790 245 ntBASIC4.75□□□□□ -1.65
RB1P06400 ZCCHC10-206ENST00000509008 608 ntAPPRIS ALT2 TSL 2 BASIC4.75□□□□□ -1.65
RB1P06400 AC008958.1-201ENST00000511047 682 ntBASIC4.75□□□□□ -1.65
RB1P06400 HMGB1P19-201ENST00000517578 577 ntBASIC4.75□□□□□ -1.65
RB1P06400 AC022882.1-201ENST00000532142 501 ntBASIC4.75□□□□□ -1.65
RB1P06400 AC139103.1-201ENST00000534696 1030 ntBASIC4.75□□□□□ -1.65
RB1P06400 AC025917.1-201ENST00000562062 612 ntTSL 3 BASIC4.75□□□□□ -1.65
RB1P06400 MIR4286-201ENST00000580651 93 ntBASIC4.75□□□□□ -1.65
RB1P06400 MIR4444-1-201ENST00000581696 74 ntBASIC4.75□□□□□ -1.65
RB1P06400 MIR4444-2-201ENST00000584390 74 ntBASIC4.75□□□□□ -1.65
RB1P06400 RN7SL435P-201ENST00000584418 282 ntBASIC4.75□□□□□ -1.65
RB1P06400 PCNAP1-202ENST00000595299 752 ntBASIC4.75□□□□□ -1.65
RB1P06400 AC004160.1-202ENST00000599917 578 ntTSL 5 BASIC4.75□□□□□ -1.65
RB1P06400 SATB1-AS1-222ENST00000600177 751 ntTSL 5 BASIC4.75□□□□□ -1.65
RB1P06400 BPIFA4P-203ENST00000603168 689 ntBASIC4.75□□□□□ -1.65
RB1P06400 BPY2B-204ENST00000615850 321 ntAPPRIS P5 TSL 1 (best) BASIC4.75□□□□□ -1.65
RB1P06400 BPY2C-204ENST00000618574 321 ntAPPRIS P5 TSL 1 (best) BASIC4.75□□□□□ -1.65
RB1P06400 AL356863.1-201ENST00000623378 1080 ntBASIC4.75□□□□□ -1.65
RB1P06400 AP003072.4-201ENST00000624580 310 ntBASIC4.75□□□□□ -1.65
RB1P06400 SATB1-AS1-263ENST00000630022 622 ntTSL 5 BASIC4.75□□□□□ -1.65
RB1P06400 AL590396.4-201ENST00000636779 956 ntBASIC4.75□□□□□ -1.65
RB1P06400 AL445984.1-201ENST00000637834 659 ntBASIC4.75□□□□□ -1.65
RB1P06400 TRIQK-214ENST00000521988 3672 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
RB1P06400 CUL2-201ENST00000374746 3903 ntTSL 5 BASIC4.75□□□□□ -1.65
RB1P06400 POSTN-210ENST00000541481 3113 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
RB1P06400 KIF3A-203ENST00000403231 2181 ntTSL 2 BASIC4.75□□□□□ -1.65
RB1P06400 AL158163.1-201ENST00000603915 1649 ntBASIC4.75□□□□□ -1.65
RB1P06400 AC046144.1-201ENST00000478559 1853 ntBASIC4.75□□□□□ -1.65
RB1P06400 CFHR3-206ENST00000617219 1462 ntTSL 5 BASIC4.75□□□□□ -1.65
RB1P06400 AC000374.1-201ENST00000434698 1745 ntBASIC4.75□□□□□ -1.65
RB1P06400 AC079062.1-203ENST00000581862 3610 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
RB1P06400 AL627171.1-201ENST00000618845 1308 ntBASIC4.74□□□□□ -1.65
RB1P06400 LINC02456-201ENST00000635615 1323 ntTSL 5 BASIC4.74□□□□□ -1.65
RB1P06400 STXBP4-204ENST00000434978 2807 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
RB1P06400 RGS5-201ENST00000313961 5862 ntAPPRIS P3 TSL 1 (best) BASIC4.74□□□□□ -1.65
RB1P06400 RNA5SP283-201ENST00000365604 119 ntBASIC4.74□□□□□ -1.65
RB1P06400 MIR554-201ENST00000384874 96 ntBASIC4.74□□□□□ -1.65
RB1P06400 AL161909.1-201ENST00000397390 712 ntBASIC4.74□□□□□ -1.65
RB1P06400 AL359643.1-201ENST00000404109 423 ntBASIC4.74□□□□□ -1.65
RB1P06400 RPL31P52-201ENST00000407532 367 ntBASIC4.74□□□□□ -1.65
RB1P06400 AL356095.1-201ENST00000417217 199 ntBASIC4.74□□□□□ -1.65
RB1P06400 TEX41-203ENST00000420472 765 ntTSL 3 BASIC4.74□□□□□ -1.65
RB1P06400 NUDT7-202ENST00000437314 930 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
RB1P06400 AL929288.2-201ENST00000446368 407 ntBASIC4.74□□□□□ -1.65
RB1P06400 RPL5P32-201ENST00000454085 879 ntBASIC4.74□□□□□ -1.65
RB1P06400 CDC42P1-201ENST00000456658 548 ntBASIC4.74□□□□□ -1.65
RB1P06400 AC079804.1-201ENST00000461922 436 ntBASIC4.74□□□□□ -1.65
RB1P06400 RN7SL132P-201ENST00000478131 296 ntBASIC4.74□□□□□ -1.65
RB1P06400 AC020890.1-201ENST00000491837 504 ntBASIC4.74□□□□□ -1.65
RB1P06400 HPRT1P2-201ENST00000505250 544 ntBASIC4.74□□□□□ -1.65
RB1P06400 HMGB3P16-201ENST00000508037 287 ntBASIC4.74□□□□□ -1.65
RB1P06400 AC023632.4-201ENST00000517783 191 ntBASIC4.74□□□□□ -1.65
RB1P06400 AC093331.2-201ENST00000520459 677 ntTSL 3 BASIC4.74□□□□□ -1.65
RB1P06400 ARL1-211ENST00000551828 776 ntTSL 5 BASIC4.74□□□□□ -1.65
RB1P06400 AL355096.1-201ENST00000553561 447 ntTSL 3 BASIC4.74□□□□□ -1.65
RB1P06400 AC023034.1-201ENST00000558141 518 ntTSL 3 BASIC4.74□□□□□ -1.65
RB1P06400 AC087477.6-201ENST00000559595 843 ntBASIC4.74□□□□□ -1.65
RB1P06400 GOLGA8M-203ENST00000568033 557 ntTSL 4 BASIC4.74□□□□□ -1.65
RB1P06400 AC006116.5-201ENST00000591936 559 ntBASIC4.74□□□□□ -1.65
RB1P06400 TTN-AS1-245ENST00000592182 749 ntTSL 5 BASIC4.74□□□□□ -1.65
RB1P06400 LINC00907-211ENST00000601948 795 ntTSL 5 BASIC4.74□□□□□ -1.65
RB1P06400 AP000569.1-201ENST00000607953 591 ntTSL 2 BASIC4.74□□□□□ -1.65
RB1P06400 AC013468.1-201ENST00000608680 598 ntBASIC4.74□□□□□ -1.65
RB1P06400 DLEU1_1.1-201ENST00000618107 190 ntBASIC4.74□□□□□ -1.65
RB1P06400 TATDN1-221ENST00000630259 915 ntTSL 5 BASIC4.74□□□□□ -1.65
RB1P06400 AC139713.2-210ENST00000641741 992 ntBASIC4.74□□□□□ -1.65
RB1P06400 LINC01197-202ENST00000555332 3568 ntTSL 3 BASIC4.74□□□□□ -1.65
RB1P06400 RC3H1-201ENST00000258349 10988 ntAPPRIS P3 TSL 1 (best) BASIC4.74□□□□□ -1.65
RB1P06400 FAM107B-229ENST00000622567 3510 ntAPPRIS P1 TSL 2 BASIC4.74□□□□□ -1.65
RB1P06400 C9orf153-204ENST00000613665 1738 ntAPPRIS P2 TSL 2 BASIC4.74□□□□□ -1.65
RB1P06400 BBX-204ENST00000406780 3674 ntAPPRIS P3 TSL 5 BASIC4.74□□□□□ -1.65
RB1P06400 AL592182.3-201ENST00000642132 3304 ntBASIC4.74□□□□□ -1.65
RB1P06400 AL359922.3-201ENST00000624779 1670 ntBASIC4.73□□□□□ -1.65
RB1P06400 CDC23-202ENST00000394886 3155 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
RB1P06400 CNTD1-205ENST00000588527 1308 ntTSL 2 BASIC4.73□□□□□ -1.65
RB1P06400 NUDT12-202ENST00000507423 1781 ntTSL 2 BASIC4.73□□□□□ -1.65
RB1P06400 OR5A1-202ENST00000641045 8612 ntAPPRIS P1 BASIC4.73□□□□□ -1.65
RB1P06400 HERC1-201ENST00000443617 15137 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
RB1P06400 ATG12-208ENST00000509910 4333 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
RB1P06400 IQGAP2-204ENST00000502745 3404 ntTSL 2 BASIC4.73□□□□□ -1.65
RB1P06400 AC119744.1-201ENST00000454746 1715 ntBASIC4.73□□□□□ -1.65
RB1P06400 LINC01967-201ENST00000356047 755 ntTSL 5 BASIC4.73□□□□□ -1.65
RB1P06400 MIR372-201ENST00000362225 67 ntBASIC4.73□□□□□ -1.65
RB1P06400 SNORA62.3-201ENST00000365110 153 ntBASIC4.73□□□□□ -1.65
RB1P06400 EEF1E1-BLOC1S5-201ENST00000397456 768 ntAPPRIS P1 TSL 3 BASIC4.73□□□□□ -1.65
RB1P06400 AL603865.2-201ENST00000401679 213 ntBASIC4.73□□□□□ -1.65
RB1P06400 AC092638.1-201ENST00000411966 1275 ntBASIC4.73□□□□□ -1.65
RB1P06400 TRIM60P5Y-201ENST00000413946 574 ntBASIC4.73□□□□□ -1.65
RB1P06400 SNRPFP1-201ENST00000414761 252 ntBASIC4.73□□□□□ -1.65
RB1P06400 CBLL1-202ENST00000415884 804 ntTSL 5 BASIC4.73□□□□□ -1.65
RB1P06400 AC100848.1-201ENST00000417298 637 ntTSL 3 BASIC4.73□□□□□ -1.65
RB1P06400 EIF4HP2-201ENST00000424380 563 ntBASIC4.73□□□□□ -1.65
RB1P06400 AL357833.2-201ENST00000426811 430 ntTSL 3 BASIC4.73□□□□□ -1.65
RB1P06400 AL117339.2-201ENST00000430475 180 ntBASIC4.73□□□□□ -1.65
RB1P06400 AL162386.2-201ENST00000442428 457 ntTSL 3 BASIC4.73□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 74.6 ms