Protein–RNA interactions for Protein: P04004

VTN, Vitronectin, humanhuman

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTNP04004 AC243772.1-201ENST00000451620 410 ntBASIC4.44□□□□□ -1.7
VTNP04004 AC009495.2-201ENST00000457108 506 ntTSL 2 BASIC4.44□□□□□ -1.7
VTNP04004 AC119751.4-201ENST00000507498 357 ntBASIC4.44□□□□□ -1.7
VTNP04004 AC079866.2-201ENST00000541870 515 ntTSL 3 BASIC4.44□□□□□ -1.7
VTNP04004 NDUFB1-204ENST00000555441 458 ntAPPRIS P1 TSL 3 BASIC4.44□□□□□ -1.7
VTNP04004 LINC02274-201ENST00000555539 1174 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
VTNP04004 PSMA3-213ENST00000557508 814 ntTSL 5 BASIC4.44□□□□□ -1.7
VTNP04004 AC091117.2-201ENST00000560324 542 ntTSL 4 BASIC4.44□□□□□ -1.7
VTNP04004 MIR5685-201ENST00000579080 79 ntBASIC4.44□□□□□ -1.7
VTNP04004 LINC02079-201ENST00000582518 294 ntTSL 2 BASIC4.44□□□□□ -1.7
VTNP04004 AC068408.2-201ENST00000584566 439 ntTSL 3 BASIC4.44□□□□□ -1.7
VTNP04004 AC005255.1-201ENST00000593748 216 ntBASIC4.44□□□□□ -1.7
VTNP04004 ZNF432-203ENST00000597273 624 ntTSL 2 BASIC4.44□□□□□ -1.7
VTNP04004 AC133794.1-201ENST00000602731 914 ntBASIC4.44□□□□□ -1.7
VTNP04004 AL158050.2-201ENST00000605336 568 ntBASIC4.44□□□□□ -1.7
VTNP04004 AP001033.2-201ENST00000609701 1003 ntBASIC4.44□□□□□ -1.7
VTNP04004 AP005229.2-201ENST00000609980 697 ntBASIC4.44□□□□□ -1.7
VTNP04004 MALAT1-205ENST00000610851 584 ntTSL 2 BASIC4.44□□□□□ -1.7
VTNP04004 AC006133.1-201ENST00000617106 264 ntBASIC4.44□□□□□ -1.7
VTNP04004 SATB1-AS1-259ENST00000629477 853 ntTSL 5 BASIC4.44□□□□□ -1.7
VTNP04004 AC092813.1-201ENST00000635455 969 ntTSL 5 BASIC4.44□□□□□ -1.7
VTNP04004 DMXL2-202ENST00000449909 7465 ntAPPRIS ALT2 TSL 1 (best) BASIC4.44□□□□□ -1.7
VTNP04004 MTCO1P4-201ENST00000520516 1409 ntBASIC4.44□□□□□ -1.7
VTNP04004 LIPI-204ENST00000614229 1439 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
VTNP04004 C12orf45-204ENST00000552951 23529 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
VTNP04004 ZMYM6-201ENST00000317538 2702 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
VTNP04004 PCDH15-234ENST00000622048 6820 ntTSL 5 BASIC4.43□□□□□ -1.7
VTNP04004 LINC00630-205ENST00000440496 2101 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
VTNP04004 CFTR-201ENST00000003084 6132 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
VTNP04004 GDAP2-202ENST00000369443 8828 ntAPPRIS P1 TSL 2 BASIC4.43□□□□□ -1.7
VTNP04004 CLHC1-203ENST00000406076 1777 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
VTNP04004 SLCO1B7-201ENST00000421593 1923 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
VTNP04004 CSMD3-201ENST00000297405 13212 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
VTNP04004 KCNJ16-201ENST00000283936 4062 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
VTNP04004 RNASE2-201ENST00000304625 755 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
VTNP04004 CFHR1-201ENST00000320493 1271 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
VTNP04004 PKIB-202ENST00000354275 1043 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
VTNP04004 ATP5F1P3-201ENST00000397213 657 ntBASIC4.43□□□□□ -1.7
VTNP04004 HDGFP1-201ENST00000405943 252 ntBASIC4.43□□□□□ -1.7
VTNP04004 ATF1P1-201ENST00000406040 927 ntBASIC4.43□□□□□ -1.7
VTNP04004 PGBD4P8-201ENST00000412993 562 ntBASIC4.43□□□□□ -1.7
VTNP04004 TCEA1P4-201ENST00000415066 844 ntBASIC4.43□□□□□ -1.7
VTNP04004 AL160175.1-201ENST00000428124 247 ntBASIC4.43□□□□□ -1.7
VTNP04004 AC018742.1-201ENST00000435237 488 ntTSL 3 BASIC4.43□□□□□ -1.7
VTNP04004 AC092447.2-201ENST00000435487 669 ntBASIC4.43□□□□□ -1.7
VTNP04004 GYG2-AS1-201ENST00000445107 515 ntTSL 5 BASIC4.43□□□□□ -1.7
VTNP04004 CLIC4P1-201ENST00000453177 535 ntBASIC4.43□□□□□ -1.7
VTNP04004 RAD23BP3-201ENST00000454157 1152 ntBASIC4.43□□□□□ -1.7
VTNP04004 AP000942.1-201ENST00000463969 747 ntBASIC4.43□□□□□ -1.7
VTNP04004 AC006148.2-201ENST00000467017 650 ntTSL 2 BASIC4.43□□□□□ -1.7
VTNP04004 OR5H3P-201ENST00000502817 919 ntBASIC4.43□□□□□ -1.7
VTNP04004 SLC25A15P5-201ENST00000508033 253 ntBASIC4.43□□□□□ -1.7
VTNP04004 MTATP6P9-201ENST00000515039 680 ntBASIC4.43□□□□□ -1.7
VTNP04004 SNORA67.7-201ENST00000516664 135 ntBASIC4.43□□□□□ -1.7
VTNP04004 AF111169.4-202ENST00000553507 262 ntTSL 3 BASIC4.43□□□□□ -1.7
VTNP04004 AL356022.1-202ENST00000555433 379 ntTSL 2 BASIC4.43□□□□□ -1.7
VTNP04004 MIR4429-201ENST00000580105 73 ntBASIC4.43□□□□□ -1.7
VTNP04004 MIR3158-1-201ENST00000583596 81 ntBASIC4.43□□□□□ -1.7
VTNP04004 AC107982.3-201ENST00000584957 985 ntBASIC4.43□□□□□ -1.7
VTNP04004 AL391001.1-201ENST00000602747 715 ntBASIC4.43□□□□□ -1.7
VTNP04004 AC068620.3-201ENST00000602749 560 ntBASIC4.43□□□□□ -1.7
VTNP04004 AL137072.1-201ENST00000603444 466 ntBASIC4.43□□□□□ -1.7
VTNP04004 AC026790.2-201ENST00000606282 430 ntBASIC4.43□□□□□ -1.7
VTNP04004 AC090912.3-201ENST00000609775 533 ntBASIC4.43□□□□□ -1.7
VTNP04004 5S_rRNA.16-201ENST00000612928 119 ntBASIC4.43□□□□□ -1.7
VTNP04004 AC005156.1-201ENST00000613371 573 ntBASIC4.43□□□□□ -1.7
VTNP04004 MIR7702-201ENST00000621931 59 ntBASIC4.43□□□□□ -1.7
VTNP04004 CYP1D1P-201ENST00000416662 1433 ntBASIC4.43□□□□□ -1.7
VTNP04004 LINC01630-206ENST00000635103 4292 ntTSL 5 BASIC4.43□□□□□ -1.7
VTNP04004 APC-207ENST00000508376 10619 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
VTNP04004 GPR180-201ENST00000376958 8822 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
VTNP04004 ZNF616-201ENST00000330123 2563 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
VTNP04004 VEPH1-203ENST00000392833 3979 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
VTNP04004 PLCZ1-206ENST00000538330 1612 ntTSL 2 BASIC4.43□□□□□ -1.7
VTNP04004 THOC2-202ENST00000355725 4930 ntAPPRIS P1 TSL 5 BASIC4.42□□□□□ -1.7
VTNP04004 MAPK10-304ENST00000641341 3984 ntBASIC4.42□□□□□ -1.7
VTNP04004 AL391684.1-201ENST00000416191 2998 ntTSL 5 BASIC4.42□□□□□ -1.7
VTNP04004 PLCB4-206ENST00000414679 3947 ntAPPRIS ALT1 TSL 5 BASIC4.42□□□□□ -1.7
VTNP04004 DTWD2-201ENST00000304058 4365 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
VTNP04004 ASB17-201ENST00000284142 1107 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
VTNP04004 RNU6-213P-201ENST00000384051 104 ntBASIC4.42□□□□□ -1.7
VTNP04004 RNU6-1005P-201ENST00000384519 107 ntBASIC4.42□□□□□ -1.7
VTNP04004 MIR320B1-201ENST00000390209 79 ntBASIC4.42□□□□□ -1.7
VTNP04004 RNU6-796P-201ENST00000391086 107 ntBASIC4.42□□□□□ -1.7
VTNP04004 RNU2-17P-201ENST00000410290 190 ntBASIC4.42□□□□□ -1.7
VTNP04004 XKRYP4-201ENST00000414395 483 ntBASIC4.42□□□□□ -1.7
VTNP04004 AL158050.1-201ENST00000416077 457 ntBASIC4.42□□□□□ -1.7
VTNP04004 AL360093.1-201ENST00000420237 1126 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
VTNP04004 AL606495.1-201ENST00000422100 813 ntBASIC4.42□□□□□ -1.7
VTNP04004 VN1R42P-201ENST00000424651 344 ntBASIC4.42□□□□□ -1.7
VTNP04004 ANKRD10-IT1-201ENST00000426991 800 ntTSL 2 BASIC4.42□□□□□ -1.7
VTNP04004 RRM2P4-201ENST00000441721 562 ntBASIC4.42□□□□□ -1.7
VTNP04004 AC013476.1-201ENST00000446709 537 ntTSL 4 BASIC4.42□□□□□ -1.7
VTNP04004 LRRC69-202ENST00000448384 1044 ntAPPRIS P1 TSL 5 BASIC4.42□□□□□ -1.7
VTNP04004 XKRYP5-201ENST00000449659 483 ntBASIC4.42□□□□□ -1.7
VTNP04004 HMGB1P5-202ENST00000451497 985 ntBASIC4.42□□□□□ -1.7
VTNP04004 AC005008.1-201ENST00000456151 612 ntBASIC4.42□□□□□ -1.7
VTNP04004 LINC01473-203ENST00000456653 1079 ntTSL 3 BASIC4.42□□□□□ -1.7
VTNP04004 AC107398.1-201ENST00000486904 505 ntBASIC4.42□□□□□ -1.7
VTNP04004 AC093801.2-201ENST00000503966 1050 ntBASIC4.42□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 100.4 ms