Protein–RNA interactions for Protein: P02458

COL2A1, Collagen alpha-1(II) chain, humanhuman

Predicted RBP Predictions only

Length 1,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1P02458 RNU2-65P-201ENST00000410162 185 ntBASIC4.49□□□□□ -1.69
COL2A1P02458 AC092652.1-202ENST00000413315 587 ntTSL 4 BASIC4.49□□□□□ -1.69
COL2A1P02458 MTCO2P1-201ENST00000424648 477 ntBASIC4.49□□□□□ -1.69
COL2A1P02458 CYCSP4-201ENST00000429682 331 ntBASIC4.49□□□□□ -1.69
COL2A1P02458 AL606517.1-201ENST00000446914 387 ntBASIC4.49□□□□□ -1.69
COL2A1P02458 AC098826.2-201ENST00000452011 651 ntBASIC4.49□□□□□ -1.69
COL2A1P02458 LARP7P4-201ENST00000481075 878 ntBASIC4.49□□□□□ -1.69
COL2A1P02458 RN7SL293P-201ENST00000481765 281 ntBASIC4.49□□□□□ -1.69
COL2A1P02458 STMN1P2-201ENST00000508435 439 ntBASIC4.49□□□□□ -1.69
COL2A1P02458 RN7SKP18-201ENST00000516005 275 ntBASIC4.49□□□□□ -1.69
COL2A1P02458 LINC01339-203ENST00000519336 561 ntTSL 3 BASIC4.49□□□□□ -1.69
COL2A1P02458 PIH1D2-208ENST00000532211 1103 ntAPPRIS P1 TSL 5 BASIC4.49□□□□□ -1.69
COL2A1P02458 LINC00508-201ENST00000538901 194 ntTSL 5 BASIC4.49□□□□□ -1.69
COL2A1P02458 LINC02384-206ENST00000541707 904 ntTSL 3 BASIC4.49□□□□□ -1.69
COL2A1P02458 AC106028.2-201ENST00000555325 464 ntTSL 4 BASIC4.49□□□□□ -1.69
COL2A1P02458 GTF2IP8-201ENST00000560687 584 ntBASIC4.49□□□□□ -1.69
COL2A1P02458 AC023394.1-201ENST00000578673 312 ntTSL 5 BASIC4.49□□□□□ -1.69
COL2A1P02458 MIMT1-201ENST00000597105 1050 ntBASIC4.49□□□□□ -1.69
COL2A1P02458 LINC00458-206ENST00000607494 849 ntTSL 3 BASIC4.49□□□□□ -1.69
COL2A1P02458 AL354760.1-201ENST00000608357 643 ntBASIC4.49□□□□□ -1.69
COL2A1P02458 AC079684.1-201ENST00000621405 437 ntBASIC4.49□□□□□ -1.69
COL2A1P02458 SATB1-AS1-263ENST00000630022 622 ntTSL 5 BASIC4.49□□□□□ -1.69
COL2A1P02458 ADGRL2-211ENST00000370730 6173 ntTSL 5 BASIC4.49□□□□□ -1.69
COL2A1P02458 KIFAP3-202ENST00000367765 4111 ntTSL 2 BASIC4.49□□□□□ -1.69
COL2A1P02458 PTP4A1-205ENST00000626021 2203 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
COL2A1P02458 RBMS1-203ENST00000409075 1550 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
COL2A1P02458 C4orf33-202ENST00000425929 1588 ntAPPRIS P1 TSL 2 BASIC4.49□□□□□ -1.69
COL2A1P02458 SCN2A-201ENST00000283256 8660 ntAPPRIS P5 TSL 1 (best) BASIC4.49□□□□□ -1.69
COL2A1P02458 ABCC9-202ENST00000261201 4650 ntAPPRIS ALT1 TSL 5 BASIC4.49□□□□□ -1.69
COL2A1P02458 TLR10-206ENST00000508334 2616 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
COL2A1P02458 DOCK7-201ENST00000251157 7084 ntAPPRIS ALT2 TSL 5 BASIC4.49□□□□□ -1.69
COL2A1P02458 ZZZ3-202ENST00000370801 4328 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
COL2A1P02458 VPS13C-202ENST00000261517 13400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.49□□□□□ -1.69
COL2A1P02458 TNRC6B-202ENST00000335727 17933 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
COL2A1P02458 KATNAL1-201ENST00000380615 7551 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
COL2A1P02458 OR52E6-202ENST00000379946 954 ntBASIC4.49□□□□□ -1.69
COL2A1P02458 AL122016.1-201ENST00000403365 367 ntBASIC4.49□□□□□ -1.69
COL2A1P02458 AC245052.5-201ENST00000416320 649 ntBASIC4.49□□□□□ -1.69
COL2A1P02458 UBE2V1P6-201ENST00000430840 422 ntBASIC4.49□□□□□ -1.69
COL2A1P02458 Z80107.1-201ENST00000436830 412 ntBASIC4.49□□□□□ -1.69
COL2A1P02458 MTATP6P26-201ENST00000445926 662 ntBASIC4.49□□□□□ -1.69
COL2A1P02458 AL121970.1-201ENST00000447557 929 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
COL2A1P02458 ETV5-AS1-201ENST00000453370 560 ntTSL 4 BASIC4.49□□□□□ -1.69
COL2A1P02458 AC026353.1-201ENST00000470523 558 ntTSL 2 BASIC4.49□□□□□ -1.69
COL2A1P02458 AC106707.2-201ENST00000484182 374 ntBASIC4.49□□□□□ -1.69
COL2A1P02458 RAC1P2-201ENST00000511164 579 ntBASIC4.49□□□□□ -1.69
COL2A1P02458 AC096734.1-201ENST00000511279 1128 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
COL2A1P02458 AC009446.1-202ENST00000521131 473 ntTSL 3 BASIC4.49□□□□□ -1.69
COL2A1P02458 MTND5P21-201ENST00000531961 522 ntBASIC4.49□□□□□ -1.69
COL2A1P02458 AP000753.2-201ENST00000540307 423 ntTSL 3 BASIC4.49□□□□□ -1.69
COL2A1P02458 AC027287.2-201ENST00000547559 592 ntTSL 4 BASIC4.49□□□□□ -1.69
COL2A1P02458 AC107032.2-201ENST00000551082 386 ntTSL 3 BASIC4.49□□□□□ -1.69
COL2A1P02458 AC027288.1-203ENST00000552167 567 ntTSL 4 BASIC4.49□□□□□ -1.69
COL2A1P02458 MTND4LP25-201ENST00000570218 163 ntBASIC4.49□□□□□ -1.69
COL2A1P02458 AC011473.1-201ENST00000601280 443 ntTSL 2 BASIC4.49□□□□□ -1.69
COL2A1P02458 AL137849.1-201ENST00000604767 169 ntBASIC4.49□□□□□ -1.69
COL2A1P02458 SNORA62.6-201ENST00000606322 83 ntBASIC4.49□□□□□ -1.69
COL2A1P02458 AC097065.2-201ENST00000608159 533 ntBASIC4.49□□□□□ -1.69
COL2A1P02458 AL138686.1-201ENST00000612699 315 ntTSL 3 BASIC4.49□□□□□ -1.69
COL2A1P02458 AL390964.1-201ENST00000622486 845 ntTSL 3 BASIC4.49□□□□□ -1.69
COL2A1P02458 AC063952.1-203ENST00000634410 658 ntBASIC4.49□□□□□ -1.69
COL2A1P02458 AC055839.1-201ENST00000634467 498 ntBASIC4.49□□□□□ -1.69
COL2A1P02458 ASAH1-263ENST00000637872 886 ntTSL 5 BASIC4.49□□□□□ -1.69
COL2A1P02458 PREPL-205ENST00000409411 4725 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
COL2A1P02458 TJP1-204ENST00000400011 6764 ntAPPRIS ALT2 TSL 1 (best) BASIC4.48□□□□□ -1.69
COL2A1P02458 KYNU-201ENST00000264170 15316 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
COL2A1P02458 LINC02232-201ENST00000509932 4079 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
COL2A1P02458 LINC02532-209ENST00000602934 2464 ntTSL 2 BASIC4.48□□□□□ -1.69
COL2A1P02458 RAD17-203ENST00000345306 2789 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
COL2A1P02458 MTND4P9-201ENST00000507819 1346 ntBASIC4.48□□□□□ -1.69
COL2A1P02458 AC072062.1-210ENST00000628464 1315 ntTSL 5 BASIC4.48□□□□□ -1.69
COL2A1P02458 LINC00670-201ENST00000313495 2953 ntTSL 2 BASIC4.48□□□□□ -1.69
COL2A1P02458 FTO-204ENST00000463855 3056 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
COL2A1P02458 CEP44-201ENST00000296519 4173 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
COL2A1P02458 C8orf34-203ENST00000348340 3571 ntAPPRIS ALT2 TSL 1 (best) BASIC4.48□□□□□ -1.69
COL2A1P02458 SMC2-AS1-201ENST00000603487 7020 ntTSL 2 BASIC4.48□□□□□ -1.69
COL2A1P02458 BMP5-201ENST00000370830 3952 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
COL2A1P02458 OR8D1-203ENST00000641897 8285 ntAPPRIS P1 BASIC4.48□□□□□ -1.69
COL2A1P02458 C5orf58-201ENST00000421269 406 ntAPPRIS ALT2 TSL 2 BASIC4.48□□□□□ -1.69
COL2A1P02458 NPM1P25-201ENST00000429734 854 ntBASIC4.48□□□□□ -1.69
COL2A1P02458 RPL7P4-203ENST00000430239 730 ntBASIC4.48□□□□□ -1.69
COL2A1P02458 AL355314.1-201ENST00000453639 316 ntTSL 5 BASIC4.48□□□□□ -1.69
COL2A1P02458 LINC01210-201ENST00000465283 625 ntTSL 2 BASIC4.48□□□□□ -1.69
COL2A1P02458 AC078828.1-201ENST00000471993 458 ntTSL 3 BASIC4.48□□□□□ -1.69
COL2A1P02458 RPL5P23-201ENST00000496040 868 ntBASIC4.48□□□□□ -1.69
COL2A1P02458 LINC02198-202ENST00000505371 526 ntTSL 5 BASIC4.48□□□□□ -1.69
COL2A1P02458 AC139491.3-201ENST00000509643 684 ntTSL 3 BASIC4.48□□□□□ -1.69
COL2A1P02458 LINC02278-201ENST00000512170 500 ntTSL 5 BASIC4.48□□□□□ -1.69
COL2A1P02458 AC124069.1-201ENST00000517454 735 ntTSL 3 BASIC4.48□□□□□ -1.69
COL2A1P02458 SULT6B1-205ENST00000535679 1027 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
COL2A1P02458 LINC00944-202ENST00000540684 888 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
COL2A1P02458 AC022929.1-201ENST00000560675 823 ntTSL 3 BASIC4.48□□□□□ -1.69
COL2A1P02458 AC013652.1-202ENST00000561058 570 ntTSL 4 BASIC4.48□□□□□ -1.69
COL2A1P02458 AC090371.2-202ENST00000582239 644 ntTSL 5 BASIC4.48□□□□□ -1.69
COL2A1P02458 AC091059.1-201ENST00000585190 215 ntTSL 3 BASIC4.48□□□□□ -1.69
COL2A1P02458 AC091132.5-202ENST00000587078 501 ntTSL 3 BASIC4.48□□□□□ -1.69
COL2A1P02458 AC040904.1-201ENST00000590850 223 ntBASIC4.48□□□□□ -1.69
COL2A1P02458 DNAJC19P3-201ENST00000594491 331 ntBASIC4.48□□□□□ -1.69
COL2A1P02458 AL157786.1-204ENST00000594870 506 ntTSL 3 BASIC4.48□□□□□ -1.69
COL2A1P02458 BNIP3P7-201ENST00000605641 516 ntBASIC4.48□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 123.2 ms