Protein–RNA interactions for Protein: P01375

TNF, Tumor necrosis factor, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFP01375 F10-AS1-201ENST00000424635 417 ntTSL 5 BASIC3.59□□□□□ -1.83
TNFP01375 AL590378.1-201ENST00000426818 303 ntTSL 3 BASIC3.59□□□□□ -1.83
TNFP01375 AC073063.1-201ENST00000434352 607 ntBASIC3.59□□□□□ -1.83
TNFP01375 AP000477.1-202ENST00000434859 847 ntTSL 3 BASIC3.59□□□□□ -1.83
TNFP01375 AC013410.1-201ENST00000436223 1232 ntBASIC3.59□□□□□ -1.83
TNFP01375 AC060834.2-201ENST00000447999 618 ntTSL 3 BASIC3.59□□□□□ -1.83
TNFP01375 CYCSP35-201ENST00000451978 304 ntBASIC3.59□□□□□ -1.83
TNFP01375 AC073387.1-201ENST00000453261 709 ntBASIC3.59□□□□□ -1.83
TNFP01375 DNAJC19P1-201ENST00000455312 319 ntBASIC3.59□□□□□ -1.83
TNFP01375 AC009495.2-201ENST00000457108 506 ntTSL 2 BASIC3.59□□□□□ -1.83
TNFP01375 RN7SL293P-201ENST00000481765 281 ntBASIC3.59□□□□□ -1.83
TNFP01375 AP001207.3-201ENST00000520268 491 ntTSL 3 BASIC3.59□□□□□ -1.83
TNFP01375 AL078612.2-201ENST00000525133 646 ntTSL 3 BASIC3.59□□□□□ -1.83
TNFP01375 MED6-207ENST00000554963 975 ntAPPRIS ALT1 TSL 5 BASIC3.59□□□□□ -1.83
TNFP01375 AC122134.1-201ENST00000565664 1104 ntBASIC3.59□□□□□ -1.83
TNFP01375 AC006116.10-201ENST00000591836 581 ntBASIC3.59□□□□□ -1.83
TNFP01375 AC022601.1-201ENST00000596954 577 ntTSL 4 BASIC3.59□□□□□ -1.83
TNFP01375 AL133247.2-201ENST00000603236 482 ntBASIC3.59□□□□□ -1.83
TNFP01375 AL357559.1-201ENST00000622228 274 ntBASIC3.59□□□□□ -1.83
TNFP01375 AC091905.1-201ENST00000624400 311 ntBASIC3.59□□□□□ -1.83
TNFP01375 OR5AC4P-202ENST00000642086 985 ntBASIC3.59□□□□□ -1.83
TNFP01375 AGL-206ENST00000370165 7106 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
TNFP01375 HNMT-202ENST00000280097 3295 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
TNFP01375 ZNF266-203ENST00000588933 3293 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
TNFP01375 PIGN-210ENST00000588571 1960 ntTSL 5 BASIC3.59□□□□□ -1.83
TNFP01375 AP001803.2-201ENST00000532274 2034 ntTSL 2 BASIC3.59□□□□□ -1.83
TNFP01375 CASP1-210ENST00000528974 1402 ntTSL 2 BASIC3.59□□□□□ -1.84
TNFP01375 MTCO1P12-201ENST00000414273 1543 ntBASIC3.59□□□□□ -1.84
TNFP01375 RGPD1-202ENST00000409776 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC3.59□□□□□ -1.84
TNFP01375 POSTN-203ENST00000379747 3373 ntAPPRIS P3 TSL 1 (best) BASIC3.59□□□□□ -1.84
TNFP01375 CLHC1-203ENST00000406076 1777 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
TNFP01375 PTPN22-211ENST00000538253 3575 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
TNFP01375 FIGNL1-203ENST00000419119 3700 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
TNFP01375 IL1R1-204ENST00000409929 1858 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
TNFP01375 RNF38-210ENST00000611646 5185 ntTSL 5 BASIC3.58□□□□□ -1.84
TNFP01375 IQCH-201ENST00000335894 4208 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
TNFP01375 CENPI-202ENST00000372927 3262 ntAPPRIS P3 TSL 5 BASIC3.58□□□□□ -1.84
TNFP01375 RPL9-201ENST00000295955 750 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
TNFP01375 SNORD9-201ENST00000362566 104 ntBASIC3.58□□□□□ -1.84
TNFP01375 AIF1-202ENST00000376049 524 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
TNFP01375 EQTN-202ENST00000380032 1033 ntAPPRIS P3 TSL 1 (best) BASIC3.58□□□□□ -1.84
TNFP01375 AL158839.1-201ENST00000413943 575 ntTSL 2 BASIC3.58□□□□□ -1.84
TNFP01375 RAC1P3-201ENST00000416129 580 ntBASIC3.58□□□□□ -1.84
TNFP01375 HMGB3P20-201ENST00000417997 600 ntBASIC3.58□□□□□ -1.84
TNFP01375 LINC00626-201ENST00000420691 955 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
TNFP01375 LINC01445-201ENST00000426205 812 ntTSL 3 BASIC3.58□□□□□ -1.84
TNFP01375 DPY19L1P2-201ENST00000426647 915 ntBASIC3.58□□□□□ -1.84
TNFP01375 AL161640.1-201ENST00000429507 390 ntTSL 2 BASIC3.58□□□□□ -1.84
TNFP01375 IGKV1OR9-2-201ENST00000431378 277 ntBASIC3.58□□□□□ -1.84
TNFP01375 AL512658.1-202ENST00000433486 400 ntTSL 3 BASIC3.58□□□□□ -1.84
TNFP01375 AC023669.2-201ENST00000436266 239 ntTSL 3 BASIC3.58□□□□□ -1.84
TNFP01375 AC012594.1-271ENST00000438635 736 ntTSL 3 BASIC3.58□□□□□ -1.84
TNFP01375 AL672167.1-201ENST00000441381 464 ntTSL 3 BASIC3.58□□□□□ -1.84
TNFP01375 PRDX3P3-201ENST00000447765 522 ntBASIC3.58□□□□□ -1.84
TNFP01375 AC239798.3-201ENST00000454459 408 ntBASIC3.58□□□□□ -1.84
TNFP01375 AC099563.1-201ENST00000456086 418 ntBASIC3.58□□□□□ -1.84
TNFP01375 AC107015.1-201ENST00000466902 747 ntBASIC3.58□□□□□ -1.84
TNFP01375 AC006511.1-201ENST00000470614 315 ntBASIC3.58□□□□□ -1.84
TNFP01375 RN7SL809P-201ENST00000482040 297 ntBASIC3.58□□□□□ -1.84
TNFP01375 CD200R1-205ENST00000490004 778 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
TNFP01375 EPPIN-WFDC6-201ENST00000504988 1156 ntAPPRIS P1 TSL 2 BASIC3.58□□□□□ -1.84
TNFP01375 AC113192.5-201ENST00000528779 486 ntTSL 2 BASIC3.58□□□□□ -1.84
TNFP01375 AC110023.1-201ENST00000554318 457 ntTSL 3 BASIC3.58□□□□□ -1.84
TNFP01375 TRAV15-201ENST00000556680 249 ntBASIC3.58□□□□□ -1.84
TNFP01375 C14orf2-211ENST00000557040 472 ntAPPRIS P1 TSL 3 BASIC3.58□□□□□ -1.84
TNFP01375 PWRN1-202ENST00000562501 642 ntTSL 3 BASIC3.58□□□□□ -1.84
TNFP01375 RN7SL339P-201ENST00000580597 296 ntBASIC3.58□□□□□ -1.84
TNFP01375 CCDC178-211ENST00000581852 876 ntAPPRIS ALT2 TSL 2 BASIC3.58□□□□□ -1.84
TNFP01375 MIR7851-201ENST00000610611 160 ntBASIC3.58□□□□□ -1.84
TNFP01375 AC069209.1-201ENST00000619282 651 ntBASIC3.58□□□□□ -1.84
TNFP01375 CNGA1-203ENST00000420489 2746 ntAPPRIS P3 TSL 2 BASIC3.58□□□□□ -1.84
TNFP01375 AC007823.1-201ENST00000569932 1566 ntBASIC3.58□□□□□ -1.84
TNFP01375 AC021355.1-202ENST00000519996 1633 ntTSL 2 BASIC3.58□□□□□ -1.84
TNFP01375 AC018462.1-201ENST00000425966 1684 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
TNFP01375 AC245100.2-201ENST00000454544 1679 ntBASIC3.58□□□□□ -1.84
TNFP01375 WHAMMP2-201ENST00000512149 5482 ntTSL 5 BASIC3.58□□□□□ -1.84
TNFP01375 IL1R1-202ENST00000409329 1862 ntTSL 5 BASIC3.58□□□□□ -1.84
TNFP01375 ASNSP1-201ENST00000518311 1939 ntBASIC3.58□□□□□ -1.84
TNFP01375 BRIP1-202ENST00000577598 3969 ntAPPRIS ALT2 TSL 5 BASIC3.58□□□□□ -1.84
TNFP01375 FOXP2-224ENST00000635534 4290 ntTSL 5 BASIC3.58□□□□□ -1.84
TNFP01375 IDE-202ENST00000371581 4480 ntTSL 2 BASIC3.58□□□□□ -1.84
TNFP01375 CFAP44-202ENST00000393845 7069 ntAPPRIS ALT2 TSL 5 BASIC3.58□□□□□ -1.84
TNFP01375 PDE1A-205ENST00000435564 4885 ntAPPRIS P3 TSL 1 (best) BASIC3.58□□□□□ -1.84
TNFP01375 IPO11-202ENST00000409296 3564 ntTSL 2 BASIC3.57□□□□□ -1.84
TNFP01375 CNTN6-201ENST00000350110 3814 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
TNFP01375 OR4F6-201ENST00000328882 1238 ntAPPRIS P1 BASIC3.57□□□□□ -1.84
TNFP01375 ATP2B1-202ENST00000359142 6977 ntTSL 5 BASIC3.57□□□□□ -1.84
TNFP01375 SNORA70.4-201ENST00000365509 134 ntBASIC3.57□□□□□ -1.84
TNFP01375 RNA5SP39-201ENST00000411245 120 ntBASIC3.57□□□□□ -1.84
TNFP01375 AC068533.1-201ENST00000418542 415 ntBASIC3.57□□□□□ -1.84
TNFP01375 AL691447.1-201ENST00000419456 387 ntBASIC3.57□□□□□ -1.84
TNFP01375 BX842559.1-201ENST00000419615 532 ntBASIC3.57□□□□□ -1.84
TNFP01375 AL031429.1-201ENST00000426775 749 ntTSL 2 BASIC3.57□□□□□ -1.84
TNFP01375 LINC01222-201ENST00000427439 1785 ntTSL 2 BASIC3.57□□□□□ -1.84
TNFP01375 TAB3-AS1-201ENST00000428263 245 ntTSL 5 BASIC3.57□□□□□ -1.84
TNFP01375 AL138916.1-201ENST00000436295 455 ntTSL 3 BASIC3.57□□□□□ -1.84
TNFP01375 AL645931.1-201ENST00000439737 410 ntBASIC3.57□□□□□ -1.84
TNFP01375 AL365318.1-201ENST00000453128 705 ntTSL 3 BASIC3.57□□□□□ -1.84
TNFP01375 LINC00377-201ENST00000456588 657 ntTSL 5 BASIC3.57□□□□□ -1.84
TNFP01375 AC069499.1-201ENST00000489433 509 ntBASIC3.57□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 72.2 ms