Protein–RNA interactions for Protein: P01033

TIMP1, Metalloproteinase inhibitor 1, humanhuman

Predictions only

Length 207 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP1P01033 VGLL4-219ENST00000638314 93 ntTSL 5 BASIC4.2□□□□□ -1.74
TIMP1P01033 SMC1B-201ENST00000357450 4201 ntAPPRIS P1 TSL 5 BASIC4.2□□□□□ -1.74
TIMP1P01033 MACC1-201ENST00000332878 2994 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
TIMP1P01033 U2SURP-208ENST00000473835 7276 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
TIMP1P01033 VPS13C-202ENST00000261517 13400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.19□□□□□ -1.74
TIMP1P01033 CNTRL-201ENST00000238341 7431 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
TIMP1P01033 ZMYM6-201ENST00000317538 2702 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
TIMP1P01033 KIF23-206ENST00000558585 2296 ntTSL 2 BASIC4.19□□□□□ -1.74
TIMP1P01033 RXFP1-205ENST00000448688 3861 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
TIMP1P01033 AC007529.1-201ENST00000418574 2178 ntBASIC4.19□□□□□ -1.74
TIMP1P01033 RNA5SP50-201ENST00000363731 107 ntBASIC4.19□□□□□ -1.74
TIMP1P01033 MIR490-201ENST00000384865 128 ntBASIC4.19□□□□□ -1.74
TIMP1P01033 MIR7-1-201ENST00000384871 110 ntBASIC4.19□□□□□ -1.74
TIMP1P01033 SNORA48.2-201ENST00000390926 124 ntBASIC4.19□□□□□ -1.74
TIMP1P01033 MTND3P20-201ENST00000407663 186 ntBASIC4.19□□□□□ -1.74
TIMP1P01033 SNORA3C-201ENST00000408792 125 ntBASIC4.19□□□□□ -1.74
TIMP1P01033 AC096664.2-201ENST00000411843 406 ntBASIC4.19□□□□□ -1.74
TIMP1P01033 AC097717.1-233ENST00000413557 460 ntTSL 3 BASIC4.19□□□□□ -1.74
TIMP1P01033 SRGAP3-AS1-201ENST00000414633 428 ntTSL 2 BASIC4.19□□□□□ -1.74
TIMP1P01033 AL390879.2-203ENST00000426943 1121 ntBASIC4.19□□□□□ -1.74
TIMP1P01033 ISM1-AS1-201ENST00000431407 652 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
TIMP1P01033 PRELID3BP10-201ENST00000431957 584 ntBASIC4.19□□□□□ -1.74
TIMP1P01033 AC092641.1-201ENST00000440229 772 ntBASIC4.19□□□□□ -1.74
TIMP1P01033 RANP8-201ENST00000444720 713 ntBASIC4.19□□□□□ -1.74
TIMP1P01033 CASP3P1-201ENST00000446037 609 ntBASIC4.19□□□□□ -1.74
TIMP1P01033 AL450344.1-201ENST00000456018 639 ntTSL 2 BASIC4.19□□□□□ -1.74
TIMP1P01033 SNORD105B-201ENST00000458770 79 ntBASIC4.19□□□□□ -1.74
TIMP1P01033 AP000942.1-201ENST00000463969 747 ntBASIC4.19□□□□□ -1.74
TIMP1P01033 AL049544.1-201ENST00000511849 673 ntTSL 3 BASIC4.19□□□□□ -1.74
TIMP1P01033 AC011131.1-201ENST00000521224 252 ntTSL 2 BASIC4.19□□□□□ -1.74
TIMP1P01033 AC007458.1-201ENST00000542812 373 ntBASIC4.19□□□□□ -1.74
TIMP1P01033 CACNA1C-AS4-201ENST00000544415 735 ntTSL 3 BASIC4.19□□□□□ -1.74
TIMP1P01033 AC020914.6-201ENST00000594327 272 ntBASIC4.19□□□□□ -1.74
TIMP1P01033 SNORD91B-202ENST00000608459 222 ntBASIC4.19□□□□□ -1.74
TIMP1P01033 AL513314.2-206ENST00000617276 434 ntTSL 5 BASIC4.19□□□□□ -1.74
TIMP1P01033 C8orf89-203ENST00000625134 507 ntAPPRIS ALT2 TSL 1 (best) BASIC4.19□□□□□ -1.74
TIMP1P01033 CHRM3-AS2-209ENST00000628573 766 ntTSL 5 BASIC4.19□□□□□ -1.74
TIMP1P01033 ETV1-203ENST00000403527 3363 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
TIMP1P01033 Z95327.2-201ENST00000414579 1873 ntBASIC4.19□□□□□ -1.74
TIMP1P01033 GABPB1-204ENST00000396464 1401 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
TIMP1P01033 DDX18P3-201ENST00000404856 2007 ntBASIC4.19□□□□□ -1.74
TIMP1P01033 RAD17-203ENST00000345306 2789 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
TIMP1P01033 CNTN1-201ENST00000347616 5507 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
TIMP1P01033 COPS2-202ENST00000388901 6628 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
TIMP1P01033 COX7B2-201ENST00000355591 542 ntAPPRIS P2 TSL 1 (best) BASIC4.18□□□□□ -1.74
TIMP1P01033 MIR365B-201ENST00000362317 111 ntBASIC4.18□□□□□ -1.74
TIMP1P01033 S100G-201ENST00000380200 455 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
TIMP1P01033 MIR199A2-201ENST00000385289 110 ntBASIC4.18□□□□□ -1.74
TIMP1P01033 MTATP6P19-201ENST00000413797 659 ntBASIC4.18□□□□□ -1.74
TIMP1P01033 AC073063.1-201ENST00000434352 607 ntBASIC4.18□□□□□ -1.74
TIMP1P01033 MTND2P2-201ENST00000434633 945 ntBASIC4.18□□□□□ -1.74
TIMP1P01033 AL138916.1-201ENST00000436295 455 ntTSL 3 BASIC4.18□□□□□ -1.74
TIMP1P01033 LINC00376-201ENST00000439454 693 ntTSL 5 BASIC4.18□□□□□ -1.74
TIMP1P01033 SETD6P1-201ENST00000444575 317 ntBASIC4.18□□□□□ -1.74
TIMP1P01033 AC073387.1-201ENST00000453261 709 ntBASIC4.18□□□□□ -1.74
TIMP1P01033 MTND3P4-201ENST00000453537 303 ntBASIC4.18□□□□□ -1.74
TIMP1P01033 RPL6P9-201ENST00000466502 859 ntBASIC4.18□□□□□ -1.74
TIMP1P01033 AC017015.1-201ENST00000477387 286 ntBASIC4.18□□□□□ -1.74
TIMP1P01033 RN7SKP13-201ENST00000515933 244 ntBASIC4.18□□□□□ -1.74
TIMP1P01033 AC009446.1-202ENST00000521131 473 ntTSL 3 BASIC4.18□□□□□ -1.74
TIMP1P01033 AC090753.1-201ENST00000522087 331 ntTSL 3 BASIC4.18□□□□□ -1.74
TIMP1P01033 LINC01479-202ENST00000546170 444 ntTSL 2 BASIC4.18□□□□□ -1.74
TIMP1P01033 CFL2-206ENST00000556161 546 ntTSL 4 BASIC4.18□□□□□ -1.74
TIMP1P01033 AC009292.2-201ENST00000558889 291 ntTSL 5 BASIC4.18□□□□□ -1.74
TIMP1P01033 AC027281.1-201ENST00000574178 758 ntBASIC4.18□□□□□ -1.74
TIMP1P01033 AC023932.1-201ENST00000582726 429 ntTSL 3 BASIC4.18□□□□□ -1.74
TIMP1P01033 AC006116.4-201ENST00000589671 452 ntTSL 2 BASIC4.18□□□□□ -1.74
TIMP1P01033 AC010591.1-201ENST00000603941 649 ntBASIC4.18□□□□□ -1.74
TIMP1P01033 SCARNA15.3-201ENST00000626315 122 ntBASIC4.18□□□□□ -1.74
TIMP1P01033 SCARNA4.1-201ENST00000628597 123 ntBASIC4.18□□□□□ -1.74
TIMP1P01033 ANKRD30A-204ENST00000602533 4458 ntAPPRIS ALT2 TSL 5 BASIC4.18□□□□□ -1.74
TIMP1P01033 AMY2B-201ENST00000361355 2181 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
TIMP1P01033 AC009229.4-201ENST00000623854 1947 ntBASIC4.18□□□□□ -1.74
TIMP1P01033 LINC01566-202ENST00000569242 2801 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
TIMP1P01033 PLAG1-201ENST00000316981 7322 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
TIMP1P01033 CNTN5-207ENST00000527185 4303 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
TIMP1P01033 STEAP2-205ENST00000394629 2261 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
TIMP1P01033 CNOT6LP1-201ENST00000559681 1462 ntBASIC4.18□□□□□ -1.74
TIMP1P01033 MARK2P15-201ENST00000432204 2186 ntBASIC4.17□□□□□ -1.74
TIMP1P01033 SMC6-203ENST00000402989 3729 ntAPPRIS P1 TSL 2 BASIC4.17□□□□□ -1.74
TIMP1P01033 OR10AB1P-202ENST00000641219 1686 ntBASIC4.17□□□□□ -1.74
TIMP1P01033 AC105074.1-201ENST00000623380 3095 ntBASIC4.17□□□□□ -1.74
TIMP1P01033 GABRA2-202ENST00000381620 2525 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
TIMP1P01033 OR5T3-201ENST00000303059 1023 ntBASIC4.17□□□□□ -1.74
TIMP1P01033 RNU6-618P-201ENST00000363518 112 ntBASIC4.17□□□□□ -1.74
TIMP1P01033 RPL7P60-201ENST00000397636 735 ntBASIC4.17□□□□□ -1.74
TIMP1P01033 CLK1-203ENST00000409769 1192 ntTSL 2 BASIC4.17□□□□□ -1.74
TIMP1P01033 AC073071.1-201ENST00000412410 388 ntTSL 3 BASIC4.17□□□□□ -1.74
TIMP1P01033 ARPP21-AS1-201ENST00000415706 542 ntTSL 4 BASIC4.17□□□□□ -1.74
TIMP1P01033 MTCO1P57-201ENST00000432182 261 ntBASIC4.17□□□□□ -1.74
TIMP1P01033 MTOR-AS1-202ENST00000445982 705 ntTSL 5 BASIC4.17□□□□□ -1.74
TIMP1P01033 AC005871.1-201ENST00000450247 475 ntTSL 3 BASIC4.17□□□□□ -1.74
TIMP1P01033 GYPA-203ENST00000503627 318 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
TIMP1P01033 AC097534.1-201ENST00000507803 521 ntTSL 4 BASIC4.17□□□□□ -1.74
TIMP1P01033 AC108467.1-201ENST00000515623 672 ntTSL 3 BASIC4.17□□□□□ -1.74
TIMP1P01033 AC104997.1-201ENST00000519761 717 ntBASIC4.17□□□□□ -1.74
TIMP1P01033 CASP1-216ENST00000534497 825 ntTSL 5 BASIC4.17□□□□□ -1.74
TIMP1P01033 AC127540.1-201ENST00000580311 689 ntTSL 5 BASIC4.17□□□□□ -1.74
TIMP1P01033 AC104984.2-201ENST00000582938 385 ntTSL 3 BASIC4.17□□□□□ -1.74
TIMP1P01033 AC103987.2-201ENST00000583436 417 ntTSL 2 BASIC4.17□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 115.7 ms