Protein–RNA interactions for Protein: O95484

CLDN9, Claudin-9, humanhuman

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN9O95484 PTPN12-206ENST00000435495 2526 ntTSL 2 BASIC3.9□□□□□ -1.79
CLDN9O95484 MYB-213ENST00000525369 2866 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
CLDN9O95484 OR11H5P-202ENST00000641612 1325 ntBASIC3.9□□□□□ -1.79
CLDN9O95484 ACSM3-201ENST00000289416 2845 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
CLDN9O95484 SLC38A2-209ENST00000551374 2802 ntTSL 2 BASIC3.89□□□□□ -1.79
CLDN9O95484 TPTE2-201ENST00000255310 1562 ntTSL 5 BASIC3.89□□□□□ -1.79
CLDN9O95484 OR11H4-202ENST00000641082 1585 ntAPPRIS P1 BASIC3.89□□□□□ -1.79
CLDN9O95484 FEZ2-201ENST00000305852 1782 ntTSL 5 BASIC3.89□□□□□ -1.79
CLDN9O95484 FAM111A-201ENST00000361723 3592 ntAPPRIS P1 TSL 2 BASIC3.89□□□□□ -1.79
CLDN9O95484 OR2H1-202ENST00000377133 3021 ntAPPRIS P1 BASIC3.89□□□□□ -1.79
CLDN9O95484 FAM35A-202ENST00000298786 3614 ntTSL 5 BASIC3.89□□□□□ -1.79
CLDN9O95484 C2orf76-201ENST00000334816 676 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
CLDN9O95484 SNORD115-48-201ENST00000364764 76 ntBASIC3.89□□□□□ -1.79
CLDN9O95484 CFHR4-203ENST00000367418 1066 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
CLDN9O95484 SPINK9-201ENST00000377906 453 ntAPPRIS P2 TSL 1 (best) BASIC3.89□□□□□ -1.79
CLDN9O95484 MIR142-201ENST00000384835 87 ntBASIC3.89□□□□□ -1.79
CLDN9O95484 AL049693.1-201ENST00000402760 611 ntBASIC3.89□□□□□ -1.79
CLDN9O95484 HMGB3P19-201ENST00000403971 560 ntBASIC3.89□□□□□ -1.79
CLDN9O95484 SVIL-AS1-202ENST00000414457 1243 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
CLDN9O95484 AL078581.1-201ENST00000419134 340 ntTSL 5 BASIC3.89□□□□□ -1.79
CLDN9O95484 CNTN4-AS2-201ENST00000447256 426 ntTSL 3 BASIC3.89□□□□□ -1.79
CLDN9O95484 NDUFS5P3-201ENST00000450668 321 ntBASIC3.89□□□□□ -1.79
CLDN9O95484 LINC01768-201ENST00000453347 476 ntTSL 3 BASIC3.89□□□□□ -1.79
CLDN9O95484 RPL30P11-201ENST00000495304 339 ntBASIC3.89□□□□□ -1.79
CLDN9O95484 AC092924.1-201ENST00000496084 487 ntTSL 4 BASIC3.89□□□□□ -1.79
CLDN9O95484 RN7SKP141-201ENST00000516167 338 ntBASIC3.89□□□□□ -1.79
CLDN9O95484 SNORA31.13-201ENST00000516624 135 ntBASIC3.89□□□□□ -1.79
CLDN9O95484 AC100782.1-201ENST00000520778 590 ntTSL 3 BASIC3.89□□□□□ -1.79
CLDN9O95484 AC018616.1-201ENST00000524085 546 ntTSL 5 BASIC3.89□□□□□ -1.79
CLDN9O95484 AF117829.1-202ENST00000524166 836 ntTSL 3 BASIC3.89□□□□□ -1.79
CLDN9O95484 AP003730.1-201ENST00000524605 285 ntBASIC3.89□□□□□ -1.79
CLDN9O95484 AC004923.2-201ENST00000529649 369 ntBASIC3.89□□□□□ -1.79
CLDN9O95484 AC022081.1-201ENST00000537327 433 ntTSL 2 BASIC3.89□□□□□ -1.79
CLDN9O95484 AC019209.2-201ENST00000545704 373 ntTSL 3 BASIC3.89□□□□□ -1.79
CLDN9O95484 AL357172.1-201ENST00000556016 593 ntTSL 3 BASIC3.89□□□□□ -1.79
CLDN9O95484 MIR4284-201ENST00000578924 81 ntBASIC3.89□□□□□ -1.79
CLDN9O95484 AC023575.1-201ENST00000580510 358 ntBASIC3.89□□□□□ -1.79
CLDN9O95484 TTN-AS1-217ENST00000585625 945 ntTSL 5 BASIC3.89□□□□□ -1.79
CLDN9O95484 GALP-203ENST00000590002 150 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
CLDN9O95484 AC011524.1-201ENST00000590167 240 ntTSL 3 BASIC3.89□□□□□ -1.79
CLDN9O95484 PCNAP1-202ENST00000595299 752 ntBASIC3.89□□□□□ -1.79
CLDN9O95484 MRPS35P3-201ENST00000603189 709 ntBASIC3.89□□□□□ -1.79
CLDN9O95484 ABI1P1-201ENST00000603375 1120 ntBASIC3.89□□□□□ -1.79
CLDN9O95484 AL139286.1-201ENST00000604465 483 ntBASIC3.89□□□□□ -1.79
CLDN9O95484 AC242426.3-203ENST00000606757 712 ntTSL 3 BASIC3.89□□□□□ -1.79
CLDN9O95484 AC015802.5-201ENST00000607478 399 ntBASIC3.89□□□□□ -1.79
CLDN9O95484 CT45A6-201ENST00000612878 770 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
CLDN9O95484 AL591424.2-201ENST00000617023 128 ntBASIC3.89□□□□□ -1.79
CLDN9O95484 AC067852.7-201ENST00000623270 535 ntBASIC3.89□□□□□ -1.79
CLDN9O95484 AC124312.6-202ENST00000623624 418 ntBASIC3.89□□□□□ -1.79
CLDN9O95484 AC024023.1-201ENST00000624530 922 ntBASIC3.89□□□□□ -1.79
CLDN9O95484 MIR6830-201ENST00000636015 70 ntBASIC3.89□□□□□ -1.79
CLDN9O95484 LIPI-201ENST00000344577 1652 ntAPPRIS P2 TSL 1 (best) BASIC3.89□□□□□ -1.79
CLDN9O95484 CCNH-206ENST00000508855 2391 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
CLDN9O95484 FKTN-201ENST00000223528 7364 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
CLDN9O95484 MSTN-201ENST00000260950 2822 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
CLDN9O95484 VIP-201ENST00000367243 1581 ntAPPRIS ALT1 TSL 1 (best) BASIC3.89□□□□□ -1.79
CLDN9O95484 SPAG17-201ENST00000336338 6924 ntAPPRIS P2 TSL 1 (best) BASIC3.88□□□□□ -1.79
CLDN9O95484 MS4A14-208ENST00000531783 2910 ntAPPRIS ALT2 TSL 5 BASIC3.88□□□□□ -1.79
CLDN9O95484 PNPT1P2-201ENST00000456768 2050 ntBASIC3.88□□□□□ -1.79
CLDN9O95484 THEMIS-205ENST00000626040 3179 ntAPPRIS ALT2 TSL 2 BASIC3.88□□□□□ -1.79
CLDN9O95484 EED-206ENST00000527888 1422 ntTSL 2 BASIC3.88□□□□□ -1.79
CLDN9O95484 LRRTM4-201ENST00000409088 3616 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
CLDN9O95484 DNAJC10-201ENST00000264065 20129 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
CLDN9O95484 FAM111B-202ENST00000411426 3344 ntTSL 4 BASIC3.88□□□□□ -1.79
CLDN9O95484 LINC02384-201ENST00000360485 471 ntTSL 5 BASIC3.88□□□□□ -1.79
CLDN9O95484 AC068538.1-201ENST00000376856 336 ntBASIC3.88□□□□□ -1.79
CLDN9O95484 RNU11-4P-201ENST00000391149 133 ntBASIC3.88□□□□□ -1.79
CLDN9O95484 RN7SKP33-201ENST00000410942 340 ntBASIC3.88□□□□□ -1.79
CLDN9O95484 RPS20P25-201ENST00000412447 352 ntBASIC3.88□□□□□ -1.79
CLDN9O95484 AC099566.1-204ENST00000413825 943 ntTSL 3 BASIC3.88□□□□□ -1.79
CLDN9O95484 AC092484.1-201ENST00000420548 833 ntTSL 5 BASIC3.88□□□□□ -1.79
CLDN9O95484 CR848007.2-201ENST00000424918 787 ntBASIC3.88□□□□□ -1.79
CLDN9O95484 OR5BE1P-201ENST00000425977 939 ntBASIC3.88□□□□□ -1.79
CLDN9O95484 COX6CP15-201ENST00000426313 211 ntBASIC3.88□□□□□ -1.79
CLDN9O95484 AL031736.2-201ENST00000426573 787 ntBASIC3.88□□□□□ -1.79
CLDN9O95484 LINC00266-4P-201ENST00000427373 842 ntTSL 3 BASIC3.88□□□□□ -1.79
CLDN9O95484 AC239803.1-202ENST00000432038 590 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
CLDN9O95484 AL035458.1-201ENST00000433096 585 ntBASIC3.88□□□□□ -1.79
CLDN9O95484 AC104306.1-201ENST00000449702 371 ntBASIC3.88□□□□□ -1.79
CLDN9O95484 HMGB3P22-202ENST00000451823 572 ntBASIC3.88□□□□□ -1.79
CLDN9O95484 AC123023.1-201ENST00000455974 555 ntTSL 4 BASIC3.88□□□□□ -1.79
CLDN9O95484 SYT14P1-201ENST00000481459 721 ntBASIC3.88□□□□□ -1.79
CLDN9O95484 DWORF-201ENST00000489090 873 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
CLDN9O95484 AC097372.3-201ENST00000503593 522 ntTSL 3 BASIC3.88□□□□□ -1.79
CLDN9O95484 AC108210.1-201ENST00000510772 825 ntTSL 3 BASIC3.88□□□□□ -1.79
CLDN9O95484 AC018797.3-201ENST00000513388 1241 ntBASIC3.88□□□□□ -1.79
CLDN9O95484 RNU4ATAC6P-201ENST00000516592 126 ntBASIC3.88□□□□□ -1.79
CLDN9O95484 AC021733.1-201ENST00000519786 325 ntTSL 3 BASIC3.88□□□□□ -1.79
CLDN9O95484 AC023202.1-201ENST00000521681 491 ntTSL 3 BASIC3.88□□□□□ -1.79
CLDN9O95484 OR4A2P-201ENST00000527276 913 ntBASIC3.88□□□□□ -1.79
CLDN9O95484 AC104009.1-203ENST00000531304 571 ntTSL 4 BASIC3.88□□□□□ -1.79
CLDN9O95484 AC026888.1-201ENST00000553348 559 ntTSL 4 BASIC3.88□□□□□ -1.79
CLDN9O95484 AL358333.1-201ENST00000555115 467 ntTSL 3 BASIC3.88□□□□□ -1.79
CLDN9O95484 PSMG2-204ENST00000585331 983 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
CLDN9O95484 AC010680.3-201ENST00000604215 520 ntBASIC3.88□□□□□ -1.79
CLDN9O95484 AC125613.1-204ENST00000636224 1248 ntTSL 5 BASIC3.88□□□□□ -1.79
CLDN9O95484 OR5BE1P-202ENST00000641168 1176 ntBASIC3.88□□□□□ -1.79
CLDN9O95484 AC018555.1-201ENST00000567548 1980 ntBASIC3.88□□□□□ -1.79
CLDN9O95484 MTND4P31-201ENST00000425607 1343 ntBASIC3.88□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 83.7 ms