Protein–RNA interactions for Protein: O60481

ZIC3, Zinc finger protein ZIC 3, humanhuman

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC3O60481 ZFPM2-AS1-204ENST00000520433 748 ntTSL 3 BASIC4.27□□□□□ -1.73
ZIC3O60481 AF279873.1-201ENST00000523393 313 ntBASIC4.27□□□□□ -1.73
ZIC3O60481 AC087373.1-201ENST00000524920 491 ntBASIC4.27□□□□□ -1.73
ZIC3O60481 XIRP2-AS1-201ENST00000525330 776 ntTSL 3 BASIC4.27□□□□□ -1.73
ZIC3O60481 OR5M2P-201ENST00000529003 936 ntBASIC4.27□□□□□ -1.73
ZIC3O60481 AL356022.1-201ENST00000557465 483 ntTSL 5 BASIC4.27□□□□□ -1.73
ZIC3O60481 AC002400.1-201ENST00000569310 726 ntBASIC4.27□□□□□ -1.73
ZIC3O60481 AC005899.1-201ENST00000584125 563 ntTSL 5 BASIC4.27□□□□□ -1.73
ZIC3O60481 AC092296.3-201ENST00000589968 249 ntTSL 3 BASIC4.27□□□□□ -1.73
ZIC3O60481 TEX41-222ENST00000597173 1134 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
ZIC3O60481 AL031281.1-201ENST00000604049 488 ntBASIC4.27□□□□□ -1.73
ZIC3O60481 Z94722.1-201ENST00000604328 474 ntBASIC4.27□□□□□ -1.73
ZIC3O60481 AL392048.1-201ENST00000613946 534 ntBASIC4.27□□□□□ -1.73
ZIC3O60481 AC121761.2-201ENST00000617300 689 ntBASIC4.27□□□□□ -1.73
ZIC3O60481 AL512506.2-201ENST00000624472 458 ntBASIC4.27□□□□□ -1.73
ZIC3O60481 AC134980.1-211ENST00000638243 1094 ntTSL 2 BASIC4.27□□□□□ -1.73
ZIC3O60481 RIF1-203ENST00000428287 7722 ntAPPRIS ALT2 TSL 1 (best) BASIC4.27□□□□□ -1.73
ZIC3O60481 SCN1A-218ENST00000640036 8131 ntAPPRIS ALT1 TSL 5 BASIC4.27□□□□□ -1.73
ZIC3O60481 ESRRG-202ENST00000360012 5431 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
ZIC3O60481 AL590399.5-201ENST00000428709 3325 ntTSL 2 BASIC4.27□□□□□ -1.73
ZIC3O60481 MAPK6PS3-201ENST00000403865 2162 ntBASIC4.27□□□□□ -1.73
ZIC3O60481 AC008079.2-201ENST00000623543 20396 ntBASIC4.27□□□□□ -1.73
ZIC3O60481 R3HCC1L-201ENST00000298999 3379 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
ZIC3O60481 SCN11A-202ENST00000444237 5729 ntAPPRIS ALT2 TSL 5 BASIC4.26□□□□□ -1.73
ZIC3O60481 AL031320.2-201ENST00000591892 2079 ntTSL 5 BASIC4.26□□□□□ -1.73
ZIC3O60481 GOLPH3L-201ENST00000271732 2999 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
ZIC3O60481 DNAJB4-201ENST00000370763 2988 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
ZIC3O60481 ODAM-201ENST00000396094 1319 ntAPPRIS P1 TSL 5 BASIC4.26□□□□□ -1.73
ZIC3O60481 SMAD4-202ENST00000398417 8495 ntAPPRIS P1 TSL 5 BASIC4.26□□□□□ -1.73
ZIC3O60481 AC245407.1-201ENST00000621489 2538 ntTSL 2 BASIC4.26□□□□□ -1.73
ZIC3O60481 TMEM154-201ENST00000304385 10698 ntAPPRIS P2 TSL 1 (best) BASIC4.26□□□□□ -1.73
ZIC3O60481 TUBD1-214ENST00000592426 1460 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
ZIC3O60481 TCF4-281ENST00000636822 7640 ntTSL 5 BASIC4.26□□□□□ -1.73
ZIC3O60481 SLC30A7-201ENST00000357650 1281 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
ZIC3O60481 RNU6-582P-201ENST00000362989 107 ntBASIC4.26□□□□□ -1.73
ZIC3O60481 RNU4-44P-201ENST00000363050 141 ntBASIC4.26□□□□□ -1.73
ZIC3O60481 RAET1L-202ENST00000367341 1285 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
ZIC3O60481 MLIP-203ENST00000370877 1234 ntAPPRIS ALT2 TSL 5 BASIC4.26□□□□□ -1.73
ZIC3O60481 MANSC4-201ENST00000381273 1023 ntAPPRIS P1 TSL 5 BASIC4.26□□□□□ -1.73
ZIC3O60481 TRAJ35-201ENST00000390502 59 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
ZIC3O60481 RNU6-1300P-201ENST00000391046 108 ntBASIC4.26□□□□□ -1.73
ZIC3O60481 AL049697.2-201ENST00000403708 294 ntBASIC4.26□□□□□ -1.73
ZIC3O60481 AL139098.1-201ENST00000407291 389 ntBASIC4.26□□□□□ -1.73
ZIC3O60481 CLK1-203ENST00000409769 1192 ntTSL 2 BASIC4.26□□□□□ -1.73
ZIC3O60481 NPM1P40-201ENST00000412758 733 ntBASIC4.26□□□□□ -1.73
ZIC3O60481 TEX41-202ENST00000414256 604 ntTSL 5 BASIC4.26□□□□□ -1.73
ZIC3O60481 AL359378.2-201ENST00000415575 746 ntTSL 2 BASIC4.26□□□□□ -1.73
ZIC3O60481 ATG4AP1-201ENST00000416893 538 ntBASIC4.26□□□□□ -1.73
ZIC3O60481 AC140479.3-201ENST00000418944 1126 ntBASIC4.26□□□□□ -1.73
ZIC3O60481 AC099336.2-201ENST00000422457 254 ntBASIC4.26□□□□□ -1.73
ZIC3O60481 AC011233.1-201ENST00000422812 283 ntBASIC4.26□□□□□ -1.73
ZIC3O60481 RPL7P57-201ENST00000423238 740 ntBASIC4.26□□□□□ -1.73
ZIC3O60481 SLC16A12-AS1-201ENST00000423474 405 ntTSL 3 BASIC4.26□□□□□ -1.73
ZIC3O60481 CKS1BP6-201ENST00000424932 240 ntBASIC4.26□□□□□ -1.73
ZIC3O60481 RPS26P40-201ENST00000435209 294 ntBASIC4.26□□□□□ -1.73
ZIC3O60481 UBE2D3P1-201ENST00000436669 444 ntBASIC4.26□□□□□ -1.73
ZIC3O60481 YWHAZP7-201ENST00000436906 631 ntBASIC4.26□□□□□ -1.73
ZIC3O60481 AL591178.1-201ENST00000439239 454 ntTSL 5 BASIC4.26□□□□□ -1.73
ZIC3O60481 GTF3AP5-201ENST00000442645 697 ntBASIC4.26□□□□□ -1.73
ZIC3O60481 LINC00363-201ENST00000443228 210 ntTSL 5 BASIC4.26□□□□□ -1.73
ZIC3O60481 H2AFZP5-201ENST00000446960 382 ntBASIC4.26□□□□□ -1.73
ZIC3O60481 RPL7L1P1-201ENST00000448259 785 ntBASIC4.26□□□□□ -1.73
ZIC3O60481 TMEM246-AS1-204ENST00000450109 538 ntTSL 3 BASIC4.26□□□□□ -1.73
ZIC3O60481 AC108463.1-201ENST00000450258 347 ntBASIC4.26□□□□□ -1.73
ZIC3O60481 AC099560.2-201ENST00000457554 255 ntBASIC4.26□□□□□ -1.73
ZIC3O60481 GUCA1C-203ENST00000471108 633 ntTSL 2 BASIC4.26□□□□□ -1.73
ZIC3O60481 ALG13-211ENST00000473389 693 ntTSL 2 BASIC4.26□□□□□ -1.73
ZIC3O60481 AC126121.1-201ENST00000482313 553 ntBASIC4.26□□□□□ -1.73
ZIC3O60481 AC104619.2-201ENST00000514293 646 ntTSL 3 BASIC4.26□□□□□ -1.73
ZIC3O60481 TET2-AS1-201ENST00000515414 537 ntTSL 5 BASIC4.26□□□□□ -1.73
ZIC3O60481 RN7SKP31-201ENST00000516354 278 ntBASIC4.26□□□□□ -1.73
ZIC3O60481 MTCO1P47-201ENST00000523889 1271 ntBASIC4.26□□□□□ -1.73
ZIC3O60481 GCSAML-207ENST00000527541 1094 ntAPPRIS ALT2 TSL 1 (best) BASIC4.26□□□□□ -1.73
ZIC3O60481 NRG3-205ENST00000537893 1174 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
ZIC3O60481 LINC02375-201ENST00000545739 852 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
ZIC3O60481 AC093012.1-203ENST00000548437 450 ntTSL 2 BASIC4.26□□□□□ -1.73
ZIC3O60481 MTCYBP27-201ENST00000555160 670 ntBASIC4.26□□□□□ -1.73
ZIC3O60481 TRAV30-201ENST00000557168 337 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
ZIC3O60481 AC091231.1-201ENST00000558443 391 ntTSL 5 BASIC4.26□□□□□ -1.73
ZIC3O60481 AC105129.1-201ENST00000560250 297 ntBASIC4.26□□□□□ -1.73
ZIC3O60481 AC012404.1-201ENST00000560876 476 ntTSL 3 BASIC4.26□□□□□ -1.73
ZIC3O60481 AC009142.1-202ENST00000562565 563 ntTSL 2 BASIC4.26□□□□□ -1.73
ZIC3O60481 AL035071.2-201ENST00000565572 459 ntTSL 3 BASIC4.26□□□□□ -1.73
ZIC3O60481 AC103876.1-201ENST00000568634 418 ntTSL 3 BASIC4.26□□□□□ -1.73
ZIC3O60481 AC079171.1-201ENST00000568788 914 ntBASIC4.26□□□□□ -1.73
ZIC3O60481 RN7SL690P-201ENST00000582087 240 ntBASIC4.26□□□□□ -1.73
ZIC3O60481 AL390838.2-201ENST00000602394 274 ntBASIC4.26□□□□□ -1.73
ZIC3O60481 AC104785.1-201ENST00000603220 588 ntBASIC4.26□□□□□ -1.73
ZIC3O60481 Z99497.2-201ENST00000603634 310 ntBASIC4.26□□□□□ -1.73
ZIC3O60481 AC069304.3-201ENST00000603938 1084 ntBASIC4.26□□□□□ -1.73
ZIC3O60481 AC091488.1-201ENST00000604239 660 ntBASIC4.26□□□□□ -1.73
ZIC3O60481 AL158042.1-201ENST00000605338 460 ntBASIC4.26□□□□□ -1.73
ZIC3O60481 AC080013.6-201ENST00000606185 215 ntBASIC4.26□□□□□ -1.73
ZIC3O60481 PLSCR2-206ENST00000610787 1001 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
ZIC3O60481 AL139418.1-201ENST00000613613 177 ntBASIC4.26□□□□□ -1.73
ZIC3O60481 AC090246.1-201ENST00000616499 426 ntBASIC4.26□□□□□ -1.73
ZIC3O60481 AC234782.5-201ENST00000617723 324 ntBASIC4.26□□□□□ -1.73
ZIC3O60481 AC243585.1-201ENST00000617867 607 ntTSL 3 BASIC4.26□□□□□ -1.73
ZIC3O60481 AC015914.2-201ENST00000618167 288 ntBASIC4.26□□□□□ -1.73
ZIC3O60481 AL603755.1-201ENST00000619504 163 ntBASIC4.26□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 89.5 ms