Protein–RNA interactions for Protein: O60391

GRIN3B, Glutamate receptor ionotropic, NMDA 3B, humanhuman

Predictions only

Length 1,043 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GRIN3BO60391 AC093766.1-202ENST00000513400 718 ntTSL 3 BASIC6.41□□□□□ -1.38
GRIN3BO60391 AC092709.1-201ENST00000521355 1045 ntBASIC6.41□□□□□ -1.38
GRIN3BO60391 AKAP7-208ENST00000537868 1006 ntTSL 5 BASIC6.41□□□□□ -1.38
GRIN3BO60391 AC026888.1-201ENST00000553348 559 ntTSL 4 BASIC6.41□□□□□ -1.38
GRIN3BO60391 AC007342.4-202ENST00000565189 721 ntTSL 3 BASIC6.41□□□□□ -1.38
GRIN3BO60391 AC106785.1-201ENST00000565935 262 ntBASIC6.41□□□□□ -1.38
GRIN3BO60391 TPRKBP2-201ENST00000565969 475 ntBASIC6.41□□□□□ -1.38
GRIN3BO60391 ALDH3A2-208ENST00000571163 590 ntTSL 5 BASIC6.41□□□□□ -1.38
GRIN3BO60391 MIR4433B-201ENST00000581329 102 ntBASIC6.41□□□□□ -1.38
GRIN3BO60391 AC011473.2-201ENST00000596286 240 ntTSL 3 BASIC6.41□□□□□ -1.38
GRIN3BO60391 ACYP2-208ENST00000606865 674 ntTSL 5 BASIC6.41□□□□□ -1.38
GRIN3BO60391 AL359314.1-201ENST00000616913 261 ntBASIC6.41□□□□□ -1.38
GRIN3BO60391 MKKS-204ENST00000639674 192 ntBASIC6.41□□□□□ -1.38
GRIN3BO60391 RBMS3-202ENST00000383766 2757 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
GRIN3BO60391 SLAIN1-201ENST00000267219 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC6.41□□□□□ -1.38
GRIN3BO60391 AC144833.1-201ENST00000567953 4089 ntBASIC6.41□□□□□ -1.38
GRIN3BO60391 MLF1-208ENST00000478894 1372 ntTSL 2 BASIC6.41□□□□□ -1.38
GRIN3BO60391 CNTN3-201ENST00000263665 4948 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
GRIN3BO60391 AL079343.1-201ENST00000572358 1771 ntBASIC6.41□□□□□ -1.38
GRIN3BO60391 LINC01619-203ENST00000549802 2169 ntTSL 2 BASIC6.41□□□□□ -1.38
GRIN3BO60391 LRIT3-201ENST00000327908 3781 ntTSL 2 BASIC6.41□□□□□ -1.38
GRIN3BO60391 CXADR-205ENST00000400169 1445 ntAPPRIS ALT2 TSL 5 BASIC6.41□□□□□ -1.38
GRIN3BO60391 BLZF1-203ENST00000367808 2749 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
GRIN3BO60391 EFCAB3-201ENST00000305286 1542 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
GRIN3BO60391 CR383658.2-201ENST00000547576 1525 ntBASIC6.4□□□□□ -1.38
GRIN3BO60391 AC017104.4-201ENST00000636283 1592 ntBASIC6.4□□□□□ -1.38
GRIN3BO60391 DCAF8L1-201ENST00000441525 3457 ntAPPRIS P1 BASIC6.4□□□□□ -1.38
GRIN3BO60391 MYCT1-201ENST00000367245 3030 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
GRIN3BO60391 MDM4-203ENST00000367182 10073 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
GRIN3BO60391 SCN2A-209ENST00000636071 8881 ntAPPRIS ALT1 TSL 5 BASIC6.4□□□□□ -1.38
GRIN3BO60391 SCN2A-214ENST00000636985 8856 ntTSL 5 BASIC6.4□□□□□ -1.38
GRIN3BO60391 ZNF682-207ENST00000595736 1710 ntTSL 2 BASIC6.4□□□□□ -1.38
GRIN3BO60391 ZNF724-201ENST00000418100 2764 ntAPPRIS P1 TSL 2 BASIC6.4□□□□□ -1.38
GRIN3BO60391 RNU6-1066P-201ENST00000363573 105 ntBASIC6.4□□□□□ -1.38
GRIN3BO60391 RNU6-374P-201ENST00000364146 108 ntBASIC6.4□□□□□ -1.38
GRIN3BO60391 RNU6-348P-201ENST00000384386 107 ntBASIC6.4□□□□□ -1.38
GRIN3BO60391 MIR1284-201ENST00000408337 120 ntBASIC6.4□□□□□ -1.38
GRIN3BO60391 RN7SKP114-201ENST00000410327 279 ntBASIC6.4□□□□□ -1.38
GRIN3BO60391 RN7SKP222-201ENST00000410651 315 ntBASIC6.4□□□□□ -1.38
GRIN3BO60391 MAGI2-AS2-201ENST00000411616 476 ntTSL 2 BASIC6.4□□□□□ -1.38
GRIN3BO60391 AL450992.3-201ENST00000413192 568 ntBASIC6.4□□□□□ -1.38
GRIN3BO60391 AP000550.2-201ENST00000417463 774 ntTSL 5 BASIC6.4□□□□□ -1.38
GRIN3BO60391 RPL21P32-201ENST00000419877 477 ntBASIC6.4□□□□□ -1.38
GRIN3BO60391 AC092651.1-201ENST00000426110 312 ntBASIC6.4□□□□□ -1.38
GRIN3BO60391 LINC01731-201ENST00000428035 420 ntTSL 3 BASIC6.4□□□□□ -1.38
GRIN3BO60391 AC114808.2-201ENST00000428335 536 ntTSL 4 BASIC6.4□□□□□ -1.38
GRIN3BO60391 SPATA13-AS1-201ENST00000430733 433 ntTSL 3 BASIC6.4□□□□□ -1.38
GRIN3BO60391 AL596276.1-201ENST00000434465 418 ntBASIC6.4□□□□□ -1.38
GRIN3BO60391 AP000552.3-201ENST00000434730 775 ntTSL 5 BASIC6.4□□□□□ -1.38
GRIN3BO60391 AC004824.1-201ENST00000439577 311 ntTSL 5 BASIC6.4□□□□□ -1.38
GRIN3BO60391 Z95327.1-201ENST00000446082 482 ntBASIC6.4□□□□□ -1.38
GRIN3BO60391 RNU7-27P-201ENST00000459281 62 ntBASIC6.4□□□□□ -1.38
GRIN3BO60391 AADACP1-204ENST00000483636 1285 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
GRIN3BO60391 AC092944.1-205ENST00000494885 517 ntTSL 4 BASIC6.4□□□□□ -1.38
GRIN3BO60391 EIF4E-204ENST00000504432 1132 ntTSL 5 BASIC6.4□□□□□ -1.38
GRIN3BO60391 LINC02064-202ENST00000507876 403 ntTSL 5 BASIC6.4□□□□□ -1.38
GRIN3BO60391 RNA5SP116-201ENST00000516132 98 ntBASIC6.4□□□□□ -1.38
GRIN3BO60391 RN7SKP244-201ENST00000516513 307 ntBASIC6.4□□□□□ -1.38
GRIN3BO60391 AP001189.2-201ENST00000527320 189 ntBASIC6.4□□□□□ -1.38
GRIN3BO60391 AP000889.1-201ENST00000530968 660 ntBASIC6.4□□□□□ -1.38
GRIN3BO60391 NTS-203ENST00000551529 801 ntTSL 3 BASIC6.4□□□□□ -1.38
GRIN3BO60391 HMGN2P47-201ENST00000559378 272 ntBASIC6.4□□□□□ -1.38
GRIN3BO60391 AC084757.1-201ENST00000559987 490 ntBASIC6.4□□□□□ -1.38
GRIN3BO60391 AC009063.1-201ENST00000563342 702 ntBASIC6.4□□□□□ -1.38
GRIN3BO60391 AP005205.1-201ENST00000563503 508 ntBASIC6.4□□□□□ -1.38
GRIN3BO60391 AC091563.1-202ENST00000574086 522 ntTSL 5 BASIC6.4□□□□□ -1.38
GRIN3BO60391 MIR548S-201ENST00000581352 82 ntBASIC6.4□□□□□ -1.38
GRIN3BO60391 MIR7515HG-226ENST00000588330 1055 ntTSL 5 BASIC6.4□□□□□ -1.38
GRIN3BO60391 AC015911.9-201ENST00000591634 185 ntTSL 5 BASIC6.4□□□□□ -1.38
GRIN3BO60391 INTS6-AS1-210ENST00000595424 301 ntTSL 5 BASIC6.4□□□□□ -1.38
GRIN3BO60391 AC012065.4-201ENST00000602445 679 ntBASIC6.4□□□□□ -1.38
GRIN3BO60391 AC245389.1-201ENST00000605141 529 ntBASIC6.4□□□□□ -1.38
GRIN3BO60391 AP000904.1-201ENST00000609911 951 ntTSL 3 BASIC6.4□□□□□ -1.38
GRIN3BO60391 AC234782.5-201ENST00000617723 324 ntBASIC6.4□□□□□ -1.38
GRIN3BO60391 AC011944.2-201ENST00000624440 683 ntBASIC6.4□□□□□ -1.38
GRIN3BO60391 ZNF404-201ENST00000324394 1844 ntAPPRIS ALT2 TSL 1 (best) BASIC6.4□□□□□ -1.38
GRIN3BO60391 DLEU7-AS1-201ENST00000413510 1806 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
GRIN3BO60391 LRRC8B-201ENST00000330947 7593 ntAPPRIS P1 TSL 5 BASIC6.4□□□□□ -1.38
GRIN3BO60391 ZNF788-203ENST00000430298 3941 ntTSL 2 BASIC6.4□□□□□ -1.39
GRIN3BO60391 ITCH-207ENST00000535650 2940 ntTSL 2 BASIC6.4□□□□□ -1.39
GRIN3BO60391 ZNF615-201ENST00000376716 4048 ntAPPRIS P3 TSL 2 BASIC6.4□□□□□ -1.39
GRIN3BO60391 NBPF26-201ENST00000609741 3671 ntTSL 5 BASIC6.4□□□□□ -1.39
GRIN3BO60391 TMEM8B-202ENST00000377991 14112 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.39
GRIN3BO60391 SMAP1-206ENST00000619054 3150 ntTSL 1 (best) BASIC6.4□□□□□ -1.39
GRIN3BO60391 C17orf105-201ENST00000449302 3753 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.39
GRIN3BO60391 FOXP2-209ENST00000393498 2617 ntTSL 5 BASIC6.4□□□□□ -1.39
GRIN3BO60391 ORC4-215ENST00000536575 6328 ntTSL 2 BASIC6.4□□□□□ -1.39
GRIN3BO60391 MECOM-217ENST00000494292 3939 ntAPPRIS ALT2 TSL 5 BASIC6.4□□□□□ -1.39
GRIN3BO60391 AC005224.3-201ENST00000584683 2140 ntBASIC6.4□□□□□ -1.39
GRIN3BO60391 PATE1-201ENST00000305738 1527 ntAPPRIS P2 TSL 1 (best) BASIC6.4□□□□□ -1.39
GRIN3BO60391 MTCO1P23-201ENST00000415223 1526 ntBASIC6.4□□□□□ -1.39
GRIN3BO60391 SLC4A7-206ENST00000428386 7385 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
GRIN3BO60391 VNN2-206ENST00000525270 1608 ntAPPRIS ALT2 TSL 2 BASIC6.39□□□□□ -1.39
GRIN3BO60391 MCM3AP-AS1-204ENST00000432735 2302 ntTSL 2 BASIC6.39□□□□□ -1.39
GRIN3BO60391 FTO-204ENST00000463855 3056 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
GRIN3BO60391 SNX18P3-202ENST00000565670 1750 ntBASIC6.39□□□□□ -1.39
GRIN3BO60391 MMRN1-204ENST00000508372 3234 ntTSL 2 BASIC6.39□□□□□ -1.39
GRIN3BO60391 HHLA2-211ENST00000619531 2548 ntAPPRIS P3 TSL 5 BASIC6.39□□□□□ -1.39
GRIN3BO60391 OR1L3-201ENST00000304820 1118 ntAPPRIS P1 BASIC6.39□□□□□ -1.39
GRIN3BO60391 RPL21P132-201ENST00000331267 462 ntBASIC6.39□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 107.5 ms