Protein–RNA interactions for Protein: O60224

SSX4, Protein SSX4, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX4O60224 AC092747.2-201ENST00000545069 983 ntBASIC4.25□□□□□ -1.73
SSX4O60224 AL049875.1-202ENST00000556620 857 ntTSL 3 BASIC4.25□□□□□ -1.73
SSX4O60224 AC091042.1-201ENST00000579213 173 ntBASIC4.25□□□□□ -1.73
SSX4O60224 MIR5708-201ENST00000579723 85 ntBASIC4.25□□□□□ -1.73
SSX4O60224 AC005324.5-201ENST00000584540 571 ntTSL 5 BASIC4.25□□□□□ -1.73
SSX4O60224 AC008687.2-201ENST00000597865 520 ntBASIC4.25□□□□□ -1.73
SSX4O60224 CERS6-AS1-204ENST00000599361 536 ntTSL 4 BASIC4.25□□□□□ -1.73
SSX4O60224 AC234771.5-201ENST00000600161 514 ntBASIC4.25□□□□□ -1.73
SSX4O60224 COX6CP4-201ENST00000605798 228 ntBASIC4.25□□□□□ -1.73
SSX4O60224 AF230666.1-202ENST00000608375 870 ntTSL 5 BASIC4.25□□□□□ -1.73
SSX4O60224 AP001521.2-201ENST00000608772 546 ntBASIC4.25□□□□□ -1.73
SSX4O60224 AL592148.2-201ENST00000612210 372 ntBASIC4.25□□□□□ -1.73
SSX4O60224 AL138478.1-201ENST00000612252 832 ntBASIC4.25□□□□□ -1.73
SSX4O60224 OR8H2-202ENST00000618136 1038 ntAPPRIS ALT1 BASIC4.25□□□□□ -1.73
SSX4O60224 AL390964.1-201ENST00000622486 845 ntTSL 3 BASIC4.25□□□□□ -1.73
SSX4O60224 AP000346.3-201ENST00000622821 210 ntBASIC4.25□□□□□ -1.73
SSX4O60224 MIR7641-1-201ENST00000627518 61 ntBASIC4.25□□□□□ -1.73
SSX4O60224 CTSLP2-203ENST00000628708 493 ntTSL 5 BASIC4.25□□□□□ -1.73
SSX4O60224 AC087821.2-201ENST00000637086 450 ntBASIC4.25□□□□□ -1.73
SSX4O60224 OR2M2-202ENST00000641211 1229 ntAPPRIS P1 BASIC4.25□□□□□ -1.73
SSX4O60224 OR2M2-203ENST00000641836 1151 ntAPPRIS P1 BASIC4.25□□□□□ -1.73
SSX4O60224 SAMMSON-226ENST00000642089 1582 ntBASIC4.25□□□□□ -1.73
SSX4O60224 SLC17A4-201ENST00000377905 3616 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
SSX4O60224 OR8J3-203ENST00000641913 3047 ntAPPRIS P1 BASIC4.25□□□□□ -1.73
SSX4O60224 MBNL1-211ENST00000463374 5092 ntAPPRIS P4 TSL 1 (best) BASIC4.25□□□□□ -1.73
SSX4O60224 AC099654.2-201ENST00000433031 1980 ntBASIC4.25□□□□□ -1.73
SSX4O60224 AL359922.3-201ENST00000624779 1670 ntBASIC4.25□□□□□ -1.73
SSX4O60224 SUPT16HP1-201ENST00000537175 3133 ntBASIC4.25□□□□□ -1.73
SSX4O60224 UGT2A2-201ENST00000604021 1544 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
SSX4O60224 G2E3-201ENST00000206595 5804 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
SSX4O60224 AKT3-201ENST00000263826 7081 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
SSX4O60224 MGA-202ENST00000545763 11413 ntAPPRIS ALT2 TSL 5 BASIC4.25□□□□□ -1.73
SSX4O60224 SLC9B1-202ENST00000394789 1735 ntAPPRIS ALT2 TSL 1 (best) BASIC4.24□□□□□ -1.73
SSX4O60224 GAPT-201ENST00000318469 2119 ntAPPRIS P1 BASIC4.24□□□□□ -1.73
SSX4O60224 CFHR3-205ENST00000471440 1965 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
SSX4O60224 CCDC54-201ENST00000261058 1444 ntAPPRIS P1 BASIC4.24□□□□□ -1.73
SSX4O60224 R3HCC1L-205ENST00000612478 3337 ntTSL 5 BASIC4.24□□□□□ -1.73
SSX4O60224 IL5-201ENST00000231454 816 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
SSX4O60224 RNA5SP191-201ENST00000362585 102 ntBASIC4.24□□□□□ -1.73
SSX4O60224 SNORA73.1-201ENST00000363107 205 ntBASIC4.24□□□□□ -1.73
SSX4O60224 RNA5SP391-201ENST00000363456 119 ntBASIC4.24□□□□□ -1.73
SSX4O60224 SPANXN4-201ENST00000370504 560 ntAPPRIS ALT2 TSL 5 BASIC4.24□□□□□ -1.73
SSX4O60224 KRTAP22-2-201ENST00000382830 293 ntAPPRIS P1 BASIC4.24□□□□□ -1.73
SSX4O60224 RNU6-906P-201ENST00000384700 70 ntBASIC4.24□□□□□ -1.73
SSX4O60224 HYKK-202ENST00000408962 847 ntTSL 5 BASIC4.24□□□□□ -1.73
SSX4O60224 OR51B3P-201ENST00000412287 913 ntBASIC4.24□□□□□ -1.73
SSX4O60224 RPS3AP37-201ENST00000419176 745 ntBASIC4.24□□□□□ -1.73
SSX4O60224 DNAJC19P7-201ENST00000428811 344 ntBASIC4.24□□□□□ -1.73
SSX4O60224 BX323845.1-201ENST00000432417 179 ntBASIC4.24□□□□□ -1.73
SSX4O60224 AC011753.3-201ENST00000443436 406 ntBASIC4.24□□□□□ -1.73
SSX4O60224 AC004980.3-201ENST00000447046 365 ntBASIC4.24□□□□□ -1.73
SSX4O60224 EIF2S2P2-201ENST00000447161 982 ntBASIC4.24□□□□□ -1.73
SSX4O60224 OR1H1P-201ENST00000448731 937 ntBASIC4.24□□□□□ -1.73
SSX4O60224 AC073264.2-201ENST00000448886 166 ntBASIC4.24□□□□□ -1.73
SSX4O60224 AC114814.3-201ENST00000449362 663 ntTSL 2 BASIC4.24□□□□□ -1.73
SSX4O60224 TCEA1P1-201ENST00000449716 880 ntBASIC4.24□□□□□ -1.73
SSX4O60224 TMEM246-AS1-204ENST00000450109 538 ntTSL 3 BASIC4.24□□□□□ -1.73
SSX4O60224 AL160408.1-203ENST00000453568 631 ntTSL 5 BASIC4.24□□□□□ -1.73
SSX4O60224 OFD1P7Y-201ENST00000454643 1155 ntBASIC4.24□□□□□ -1.73
SSX4O60224 PTGES3P5-201ENST00000455109 434 ntBASIC4.24□□□□□ -1.73
SSX4O60224 PTCHD1-AS-201ENST00000455399 718 ntTSL 3 BASIC4.24□□□□□ -1.73
SSX4O60224 AC073218.1-201ENST00000458413 171 ntTSL 5 BASIC4.24□□□□□ -1.73
SSX4O60224 AC117513.1-201ENST00000462792 766 ntTSL 2 BASIC4.24□□□□□ -1.73
SSX4O60224 AC006967.1-201ENST00000467608 589 ntBASIC4.24□□□□□ -1.73
SSX4O60224 AC093720.1-201ENST00000505681 714 ntBASIC4.24□□□□□ -1.73
SSX4O60224 AC113347.4-201ENST00000506032 685 ntTSL 3 BASIC4.24□□□□□ -1.73
SSX4O60224 HHIP-AS1-203ENST00000512359 646 ntTSL 3 BASIC4.24□□□□□ -1.73
SSX4O60224 CYCSP28-201ENST00000534284 321 ntBASIC4.24□□□□□ -1.73
SSX4O60224 AC009509.2-201ENST00000538640 429 ntTSL 2 BASIC4.24□□□□□ -1.73
SSX4O60224 AC027287.2-201ENST00000547559 592 ntTSL 4 BASIC4.24□□□□□ -1.73
SSX4O60224 DNAL1-205ENST00000554339 548 ntTSL 5 BASIC4.24□□□□□ -1.73
SSX4O60224 AC068446.3-201ENST00000555285 382 ntBASIC4.24□□□□□ -1.73
SSX4O60224 HYKK-203ENST00000563233 734 ntTSL 2 BASIC4.24□□□□□ -1.73
SSX4O60224 AC009019.1-202ENST00000568410 405 ntTSL 3 BASIC4.24□□□□□ -1.73
SSX4O60224 MTND6P33-201ENST00000571794 183 ntBASIC4.24□□□□□ -1.73
SSX4O60224 LINC01539-206ENST00000593282 678 ntTSL 4 BASIC4.24□□□□□ -1.73
SSX4O60224 AC008638.3-201ENST00000603341 463 ntBASIC4.24□□□□□ -1.73
SSX4O60224 AL139395.1-201ENST00000603662 160 ntBASIC4.24□□□□□ -1.73
SSX4O60224 AC008745.1-201ENST00000604064 271 ntBASIC4.24□□□□□ -1.73
SSX4O60224 AC099676.1-201ENST00000608886 657 ntBASIC4.24□□□□□ -1.73
SSX4O60224 C7orf77-201ENST00000616258 548 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
SSX4O60224 Metazoa_SRP.181-201ENST00000616636 288 ntBASIC4.24□□□□□ -1.73
SSX4O60224 OR1S1-201ENST00000624470 978 ntBASIC4.24□□□□□ -1.73
SSX4O60224 AC009951.2-201ENST00000634873 644 ntTSL 5 BASIC4.24□□□□□ -1.73
SSX4O60224 AC125613.1-204ENST00000636224 1248 ntTSL 5 BASIC4.24□□□□□ -1.73
SSX4O60224 MFSD8-245ENST00000641743 948 ntBASIC4.24□□□□□ -1.73
SSX4O60224 SLC25A46-208ENST00000513807 1546 ntTSL 2 BASIC4.24□□□□□ -1.73
SSX4O60224 CFAP221-215ENST00000598644 1532 ntTSL 2 BASIC4.24□□□□□ -1.73
SSX4O60224 RAP1B-201ENST00000250559 13438 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
SSX4O60224 KIF3A-203ENST00000403231 2181 ntTSL 2 BASIC4.24□□□□□ -1.73
SSX4O60224 MTND4P8-201ENST00000514997 1362 ntBASIC4.24□□□□□ -1.73
SSX4O60224 ERGIC2-201ENST00000360150 5014 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
SSX4O60224 R3HDM1-201ENST00000264160 4648 ntAPPRIS P3 TSL 1 (best) BASIC4.24□□□□□ -1.73
SSX4O60224 THEMIS-205ENST00000626040 3179 ntAPPRIS ALT2 TSL 2 BASIC4.24□□□□□ -1.73
SSX4O60224 SYTL2-213ENST00000525702 2727 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
SSX4O60224 PMCHL2-201ENST00000415808 1841 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
SSX4O60224 MAPK10-253ENST00000641010 4072 ntBASIC4.23□□□□□ -1.73
SSX4O60224 CASC1-204ENST00000395990 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC4.23□□□□□ -1.73
SSX4O60224 RASGRP1-209ENST00000559830 1910 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
SSX4O60224 CLCA2-201ENST00000370565 4025 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 84.8 ms