Protein–RNA interactions for Protein: O15116

LSM1, U6 snRNA-associated Sm-like protein LSm1, humanhuman

Known RBP Predictions only

Length 133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM1O15116 TRBV24-1-201ENST00000390397 381 ntAPPRIS P1 BASIC3.95□□□□□ -1.78
LSM1O15116 PTMAP5-201ENST00000393073 333 ntBASIC3.95□□□□□ -1.78
LSM1O15116 ELOCP19-201ENST00000411919 318 ntBASIC3.95□□□□□ -1.78
LSM1O15116 AC098872.1-201ENST00000413304 543 ntTSL 3 BASIC3.95□□□□□ -1.78
LSM1O15116 AC004022.2-201ENST00000413824 193 ntBASIC3.95□□□□□ -1.78
LSM1O15116 AL158834.2-201ENST00000415731 696 ntTSL 2 BASIC3.95□□□□□ -1.78
LSM1O15116 MTND2P15-201ENST00000418575 892 ntBASIC3.95□□□□□ -1.78
LSM1O15116 AL445528.1-201ENST00000426330 420 ntBASIC3.95□□□□□ -1.78
LSM1O15116 USP9YP31-201ENST00000431405 881 ntBASIC3.95□□□□□ -1.78
LSM1O15116 TRIM60P3Y-201ENST00000432201 673 ntBASIC3.95□□□□□ -1.78
LSM1O15116 AC008080.4-202ENST00000440034 1005 ntTSL 3 BASIC3.95□□□□□ -1.78
LSM1O15116 AL138878.2-201ENST00000440581 1241 ntBASIC3.95□□□□□ -1.78
LSM1O15116 KRTAP21-3-201ENST00000444335 253 ntAPPRIS P1 BASIC3.95□□□□□ -1.78
LSM1O15116 PTCHD1-AS-201ENST00000455399 718 ntTSL 3 BASIC3.95□□□□□ -1.78
LSM1O15116 MTND5P21-201ENST00000531961 522 ntBASIC3.95□□□□□ -1.78
LSM1O15116 AL163973.3-201ENST00000547093 430 ntTSL 3 BASIC3.95□□□□□ -1.78
LSM1O15116 LINC01584-202ENST00000563990 852 ntTSL 3 BASIC3.95□□□□□ -1.78
LSM1O15116 RPL23AP87-202ENST00000573039 466 ntBASIC3.95□□□□□ -1.78
LSM1O15116 AP001180.3-201ENST00000582221 145 ntBASIC3.95□□□□□ -1.78
LSM1O15116 AC115085.1-201ENST00000588924 229 ntBASIC3.95□□□□□ -1.78
LSM1O15116 AC022146.1-201ENST00000595307 847 ntBASIC3.95□□□□□ -1.78
LSM1O15116 AC243960.1-203ENST00000595395 599 ntTSL 4 BASIC3.95□□□□□ -1.78
LSM1O15116 MTCO3P22-201ENST00000603219 784 ntBASIC3.95□□□□□ -1.78
LSM1O15116 AL161729.3-201ENST00000603533 673 ntBASIC3.95□□□□□ -1.78
LSM1O15116 AC114878.2-201ENST00000604863 1251 ntBASIC3.95□□□□□ -1.78
LSM1O15116 AC128687.2-201ENST00000609657 566 ntBASIC3.95□□□□□ -1.78
LSM1O15116 AK6-205ENST00000618980 483 ntTSL 2 BASIC3.95□□□□□ -1.78
LSM1O15116 AC244205.2-202ENST00000635781 342 ntBASIC3.95□□□□□ -1.78
LSM1O15116 UFM1-201ENST00000239878 3138 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
LSM1O15116 PTGFR-203ENST00000370758 4337 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
LSM1O15116 AL033397.1-201ENST00000502390 3653 ntTSL 2 BASIC3.94□□□□□ -1.78
LSM1O15116 UACA-202ENST00000379983 4859 ntAPPRIS ALT2 TSL 5 BASIC3.94□□□□□ -1.78
LSM1O15116 RNMT-206ENST00000589866 1879 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
LSM1O15116 UBE2W-203ENST00000517608 8426 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
LSM1O15116 AC016687.3-202ENST00000505018 2404 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
LSM1O15116 PLPPR4-201ENST00000370184 4505 ntTSL 5 BASIC3.94□□□□□ -1.78
LSM1O15116 ADGRG2-205ENST00000357991 4661 ntAPPRIS P3 TSL 1 (best) BASIC3.94□□□□□ -1.78
LSM1O15116 FAM126A-204ENST00000432176 13177 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
LSM1O15116 CCNB2P1-201ENST00000399411 1150 ntBASIC3.94□□□□□ -1.78
LSM1O15116 RPS4XP9-201ENST00000405151 780 ntBASIC3.94□□□□□ -1.78
LSM1O15116 MTCO3P31-201ENST00000405526 789 ntBASIC3.94□□□□□ -1.78
LSM1O15116 FAR2P2-201ENST00000413041 594 ntBASIC3.94□□□□□ -1.78
LSM1O15116 RPS27AP7-201ENST00000422792 455 ntBASIC3.94□□□□□ -1.78
LSM1O15116 REG1CP-203ENST00000434852 460 ntTSL 4 BASIC3.94□□□□□ -1.78
LSM1O15116 AC006011.1-201ENST00000442758 349 ntBASIC3.94□□□□□ -1.78
LSM1O15116 LINC01923-201ENST00000443261 592 ntTSL 5 BASIC3.94□□□□□ -1.78
LSM1O15116 MTCYBP21-201ENST00000443300 1113 ntBASIC3.94□□□□□ -1.78
LSM1O15116 RPL34P26-201ENST00000445636 354 ntBASIC3.94□□□□□ -1.78
LSM1O15116 AP003774.2-202ENST00000449694 341 ntTSL 3 BASIC3.94□□□□□ -1.78
LSM1O15116 AC009963.2-201ENST00000453431 138 ntBASIC3.94□□□□□ -1.78
LSM1O15116 RN7SL738P-201ENST00000470264 297 ntBASIC3.94□□□□□ -1.78
LSM1O15116 AP000893.1-201ENST00000474462 794 ntBASIC3.94□□□□□ -1.78
LSM1O15116 AC113404.3-201ENST00000506621 555 ntTSL 5 BASIC3.94□□□□□ -1.78
LSM1O15116 AC025674.1-201ENST00000507074 324 ntBASIC3.94□□□□□ -1.78
LSM1O15116 LINC00977-201ENST00000509893 1163 ntTSL 2 BASIC3.94□□□□□ -1.78
LSM1O15116 KRT19P6-201ENST00000510983 209 ntBASIC3.94□□□□□ -1.78
LSM1O15116 AC093689.1-201ENST00000514737 246 ntTSL 5 BASIC3.94□□□□□ -1.78
LSM1O15116 AC124069.1-201ENST00000517454 735 ntTSL 3 BASIC3.94□□□□□ -1.78
LSM1O15116 AC104036.1-201ENST00000523550 611 ntTSL 3 BASIC3.94□□□□□ -1.78
LSM1O15116 AP002812.4-201ENST00000532139 286 ntBASIC3.94□□□□□ -1.78
LSM1O15116 EQTN-204ENST00000537675 879 ntAPPRIS ALT2 TSL 1 (best) BASIC3.94□□□□□ -1.78
LSM1O15116 AL929601.2-201ENST00000549951 381 ntTSL 4 BASIC3.94□□□□□ -1.78
LSM1O15116 TMEM106C-220ENST00000552561 810 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
LSM1O15116 AL389895.1-201ENST00000554127 252 ntBASIC3.94□□□□□ -1.78
LSM1O15116 CSNK1A1P1-202ENST00000563423 981 ntBASIC3.94□□□□□ -1.78
LSM1O15116 AL353708.2-201ENST00000567486 447 ntTSL 3 BASIC3.94□□□□□ -1.78
LSM1O15116 AC103808.1-201ENST00000579833 922 ntTSL 3 BASIC3.94□□□□□ -1.78
LSM1O15116 AC019193.2-201ENST00000610012 634 ntBASIC3.94□□□□□ -1.78
LSM1O15116 AC090246.1-201ENST00000616499 426 ntBASIC3.94□□□□□ -1.78
LSM1O15116 AP004607.9-201ENST00000618202 316 ntBASIC3.94□□□□□ -1.78
LSM1O15116 SCN3A-201ENST00000283254 9091 ntAPPRIS P3 TSL 1 (best) BASIC3.94□□□□□ -1.78
LSM1O15116 PIGN-240ENST00000639912 6530 ntTSL 5 BASIC3.94□□□□□ -1.78
LSM1O15116 CXCL11-201ENST00000306621 1606 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
LSM1O15116 RNF38-201ENST00000259605 5012 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
LSM1O15116 HELZ-201ENST00000358691 13810 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
LSM1O15116 DCAF13P3-201ENST00000561147 1334 ntBASIC3.94□□□□□ -1.78
LSM1O15116 ELAVL2-204ENST00000397312 3805 ntAPPRIS P3 TSL 1 (best) BASIC3.93□□□□□ -1.78
LSM1O15116 AC092650.1-201ENST00000447571 1808 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
LSM1O15116 DGKH-201ENST00000261491 17261 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
LSM1O15116 LRRC9-202ENST00000445360 4717 ntAPPRIS P1 TSL 5 BASIC3.93□□□□□ -1.78
LSM1O15116 AC010733.2-201ENST00000589496 5702 ntBASIC3.93□□□□□ -1.78
LSM1O15116 AKAP14-204ENST00000371431 977 ntAPPRIS P3 TSL 1 (best) BASIC3.93□□□□□ -1.78
LSM1O15116 RNU6-452P-201ENST00000384406 107 ntBASIC3.93□□□□□ -1.78
LSM1O15116 EI24P2-201ENST00000397776 1076 ntBASIC3.93□□□□□ -1.78
LSM1O15116 RN7SKP182-201ENST00000410772 298 ntBASIC3.93□□□□□ -1.78
LSM1O15116 AC010163.2-201ENST00000416341 381 ntTSL 2 BASIC3.93□□□□□ -1.78
LSM1O15116 AL590385.1-201ENST00000419446 462 ntTSL 3 BASIC3.93□□□□□ -1.78
LSM1O15116 AL049610.1-201ENST00000423374 372 ntBASIC3.93□□□□□ -1.78
LSM1O15116 AL358472.1-201ENST00000431295 329 ntBASIC3.93□□□□□ -1.78
LSM1O15116 YWHAQP9-201ENST00000445891 512 ntBASIC3.93□□□□□ -1.78
LSM1O15116 AL512380.1-202ENST00000447728 543 ntTSL 5 BASIC3.93□□□□□ -1.78
LSM1O15116 LINC01645-201ENST00000451341 491 ntTSL 3 BASIC3.93□□□□□ -1.78
LSM1O15116 AL137005.1-201ENST00000452944 719 ntTSL 5 BASIC3.93□□□□□ -1.78
LSM1O15116 Z95152.1-201ENST00000453556 656 ntBASIC3.93□□□□□ -1.78
LSM1O15116 LINC01753-201ENST00000458145 631 ntTSL 3 BASIC3.93□□□□□ -1.78
LSM1O15116 PTP4A2-203ENST00000470404 575 ntTSL 3 BASIC3.93□□□□□ -1.78
LSM1O15116 OR52A4P-203ENST00000498233 1014 ntBASIC3.93□□□□□ -1.78
LSM1O15116 AC025459.1-201ENST00000504072 156 ntBASIC3.93□□□□□ -1.78
LSM1O15116 MTATP6P22-201ENST00000507369 598 ntBASIC3.93□□□□□ -1.78
LSM1O15116 RNU6-551P-201ENST00000516661 103 ntBASIC3.93□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 210.1 ms