Protein–RNA interactions for Protein: O14727

APAF1, Apoptotic protease-activating factor 1, humanhuman

Predictions only

Length 1,248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APAF1O14727 OR5M1-201ENST00000526538 948 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
APAF1O14727 AC073487.1-201ENST00000547009 529 ntTSL 4 BASIC5.68□□□□□ -1.5
APAF1O14727 LINC02394-201ENST00000549140 543 ntTSL 4 BASIC5.68□□□□□ -1.5
APAF1O14727 AL109766.1-201ENST00000555080 552 ntBASIC5.68□□□□□ -1.5
APAF1O14727 AL583810.3-201ENST00000555713 584 ntTSL 4 BASIC5.68□□□□□ -1.5
APAF1O14727 AC124856.1-201ENST00000600819 896 ntBASIC5.68□□□□□ -1.5
APAF1O14727 TEX41-238ENST00000604253 709 ntTSL 5 BASIC5.68□□□□□ -1.5
APAF1O14727 C8orf89-202ENST00000624510 658 ntAPPRIS P2 TSL 3 BASIC5.68□□□□□ -1.5
APAF1O14727 AP000843.1-201ENST00000624880 701 ntBASIC5.68□□□□□ -1.5
APAF1O14727 AC012593.1-211ENST00000625996 799 ntTSL 5 BASIC5.68□□□□□ -1.5
APAF1O14727 ZNF765-201ENST00000396408 4569 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
APAF1O14727 CNKSR2-202ENST00000379510 5315 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
APAF1O14727 PJA2-202ENST00000361557 4645 ntAPPRIS P1 TSL 2 BASIC5.68□□□□□ -1.5
APAF1O14727 AC016687.3-202ENST00000505018 2404 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
APAF1O14727 AP001273.1-201ENST00000624493 3152 ntBASIC5.68□□□□□ -1.5
APAF1O14727 FANCD2-202ENST00000383807 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC5.68□□□□□ -1.5
APAF1O14727 TMEM71-210ENST00000523829 1974 ntAPPRIS ALT2 TSL 5 BASIC5.67□□□□□ -1.5
APAF1O14727 ZNF43-207ENST00000595461 3399 ntAPPRIS ALT2 TSL 1 (best) BASIC5.67□□□□□ -1.5
APAF1O14727 EFCAB5-201ENST00000394835 5132 ntAPPRIS P2 TSL 1 (best) BASIC5.67□□□□□ -1.5
APAF1O14727 OBSCN-204ENST00000366707 26772 ntAPPRIS P1 TSL 5 BASIC5.67□□□□□ -1.5
APAF1O14727 AC138393.1-206ENST00000540997 1886 ntBASIC5.67□□□□□ -1.5
APAF1O14727 UBE4A-202ENST00000431736 6061 ntAPPRIS P3 TSL 1 (best) BASIC5.67□□□□□ -1.5
APAF1O14727 OR5L2-201ENST00000378397 936 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
APAF1O14727 HTN3-201ENST00000381057 493 ntAPPRIS ALT2 TSL 2 BASIC5.67□□□□□ -1.5
APAF1O14727 TMSB4XP8-201ENST00000402089 135 ntBASIC5.67□□□□□ -1.5
APAF1O14727 MTCO2P31-201ENST00000402702 684 ntBASIC5.67□□□□□ -1.5
APAF1O14727 RN7SKP235-201ENST00000410662 305 ntBASIC5.67□□□□□ -1.5
APAF1O14727 RN7SKP216-201ENST00000411050 312 ntBASIC5.67□□□□□ -1.5
APAF1O14727 Y_RNA.625-201ENST00000411256 107 ntBASIC5.67□□□□□ -1.5
APAF1O14727 TMSB4XP6-201ENST00000415187 135 ntBASIC5.67□□□□□ -1.5
APAF1O14727 AC138024.1-201ENST00000420867 699 ntTSL 3 BASIC5.67□□□□□ -1.5
APAF1O14727 BBIP1-203ENST00000423273 492 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
APAF1O14727 CHIAP3-201ENST00000423668 1133 ntBASIC5.67□□□□□ -1.5
APAF1O14727 GTF2IP2-201ENST00000424290 697 ntBASIC5.67□□□□□ -1.5
APAF1O14727 TMSB4XP1-201ENST00000424567 135 ntBASIC5.67□□□□□ -1.5
APAF1O14727 AL353597.2-202ENST00000434901 373 ntBASIC5.67□□□□□ -1.5
APAF1O14727 BBIP1-206ENST00000447005 727 ntAPPRIS P1 TSL 2 BASIC5.67□□□□□ -1.5
APAF1O14727 AC009220.1-201ENST00000451614 275 ntBASIC5.67□□□□□ -1.5
APAF1O14727 OFD1P3Y-201ENST00000453312 783 ntBASIC5.67□□□□□ -1.5
APAF1O14727 AL160408.1-203ENST00000453568 631 ntTSL 5 BASIC5.67□□□□□ -1.5
APAF1O14727 AC010894.4-201ENST00000454203 457 ntTSL 3 BASIC5.67□□□□□ -1.5
APAF1O14727 LINC01312-202ENST00000456347 813 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
APAF1O14727 SNORD11.1-201ENST00000459482 85 ntBASIC5.67□□□□□ -1.5
APAF1O14727 RPS4XP12-201ENST00000461747 709 ntBASIC5.67□□□□□ -1.5
APAF1O14727 AC104164.2-201ENST00000496953 495 ntBASIC5.67□□□□□ -1.5
APAF1O14727 AC131211.1-201ENST00000497285 483 ntTSL 5 BASIC5.67□□□□□ -1.5
APAF1O14727 AC010406.1-201ENST00000507948 555 ntTSL 3 BASIC5.67□□□□□ -1.5
APAF1O14727 snoZ278.1-201ENST00000517059 112 ntBASIC5.67□□□□□ -1.5
APAF1O14727 RGS5-208ENST00000530507 851 ntAPPRIS ALT1 TSL 3 BASIC5.67□□□□□ -1.5
APAF1O14727 LRRC37A5P-202ENST00000536054 1095 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
APAF1O14727 AC125603.1-201ENST00000552718 366 ntTSL 3 BASIC5.67□□□□□ -1.5
APAF1O14727 NUFIP2-202ENST00000579665 559 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
APAF1O14727 BNIP3P38-201ENST00000601117 544 ntBASIC5.67□□□□□ -1.5
APAF1O14727 AC114781.5-201ENST00000615297 108 ntBASIC5.67□□□□□ -1.5
APAF1O14727 AC123768.4-201ENST00000616244 701 ntBASIC5.67□□□□□ -1.5
APAF1O14727 AL122125.1-201ENST00000616999 600 ntBASIC5.67□□□□□ -1.5
APAF1O14727 ATXN3-251ENST00000617719 1074 ntTSL 5 BASIC5.67□□□□□ -1.5
APAF1O14727 VN1R7P-201ENST00000619242 903 ntBASIC5.67□□□□□ -1.5
APAF1O14727 AC005858.1-201ENST00000620193 677 ntTSL 2 BASIC5.67□□□□□ -1.5
APAF1O14727 AC008993.2-201ENST00000631744 806 ntBASIC5.67□□□□□ -1.5
APAF1O14727 AC009951.2-201ENST00000634873 644 ntTSL 5 BASIC5.67□□□□□ -1.5
APAF1O14727 OR1S2-202ENST00000641683 941 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
APAF1O14727 FAM49B-212ENST00000519110 1902 ntAPPRIS P1 TSL 5 BASIC5.67□□□□□ -1.5
APAF1O14727 USP9YP4-201ENST00000424401 1745 ntBASIC5.67□□□□□ -1.5
APAF1O14727 SAMMSON-213ENST00000641336 1521 ntBASIC5.67□□□□□ -1.5
APAF1O14727 BCAP29-203ENST00000379119 5773 ntTSL 3 BASIC5.67□□□□□ -1.5
APAF1O14727 AC017104.4-201ENST00000636283 1592 ntBASIC5.67□□□□□ -1.5
APAF1O14727 USP8-202ENST00000396444 19026 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
APAF1O14727 AC025263.3-201ENST00000622965 1396 ntBASIC5.67□□□□□ -1.5
APAF1O14727 AP3B1-204ENST00000519295 3986 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
APAF1O14727 TMEM255A-202ENST00000371352 2879 ntTSL 2 BASIC5.66□□□□□ -1.5
APAF1O14727 ZNF705A-204ENST00000610508 3378 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
APAF1O14727 AMY2B-201ENST00000361355 2181 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
APAF1O14727 VPS13D-213ENST00000613099 16245 ntAPPRIS ALT1 TSL 1 (best) BASIC5.66□□□□□ -1.5
APAF1O14727 OR1A1-202ENST00000641322 3743 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
APAF1O14727 ZPLD1-202ENST00000466937 1531 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
APAF1O14727 AL512646.1-201ENST00000269395 1077 ntBASIC5.66□□□□□ -1.5
APAF1O14727 RNU1-87P-201ENST00000363727 170 ntBASIC5.66□□□□□ -1.5
APAF1O14727 RNA5SP36-201ENST00000410197 133 ntBASIC5.66□□□□□ -1.5
APAF1O14727 AC004690.1-201ENST00000418216 328 ntBASIC5.66□□□□□ -1.5
APAF1O14727 AC113331.1-201ENST00000428160 869 ntTSL 2 BASIC5.66□□□□□ -1.5
APAF1O14727 AC234064.1-201ENST00000436312 247 ntBASIC5.66□□□□□ -1.5
APAF1O14727 AC073143.1-201ENST00000436316 395 ntBASIC5.66□□□□□ -1.5
APAF1O14727 LINC00280-201ENST00000439525 448 ntTSL 2 BASIC5.66□□□□□ -1.5
APAF1O14727 UBE2V1P5-201ENST00000440070 405 ntBASIC5.66□□□□□ -1.5
APAF1O14727 AL009048.1-201ENST00000450437 298 ntBASIC5.66□□□□□ -1.5
APAF1O14727 AC004692.2-202ENST00000458680 478 ntTSL 3 BASIC5.66□□□□□ -1.5
APAF1O14727 ZIC4-AS1-201ENST00000462168 268 ntTSL 5 BASIC5.66□□□□□ -1.5
APAF1O14727 C10orf128-207ENST00000474718 614 ntAPPRIS P3 TSL 1 (best) BASIC5.66□□□□□ -1.5
APAF1O14727 AC118282.1-201ENST00000506408 765 ntBASIC5.66□□□□□ -1.5
APAF1O14727 AC118282.2-201ENST00000508739 374 ntBASIC5.66□□□□□ -1.5
APAF1O14727 HHIP-AS1-203ENST00000512359 646 ntTSL 3 BASIC5.66□□□□□ -1.5
APAF1O14727 RNA5SP49-201ENST00000516450 115 ntBASIC5.66□□□□□ -1.5
APAF1O14727 FTH1P11-201ENST00000517577 551 ntBASIC5.66□□□□□ -1.5
APAF1O14727 PHBP17-201ENST00000528576 541 ntBASIC5.66□□□□□ -1.5
APAF1O14727 AC006064.5-201ENST00000541782 248 ntBASIC5.66□□□□□ -1.5
APAF1O14727 PSMA3-213ENST00000557508 814 ntTSL 5 BASIC5.66□□□□□ -1.5
APAF1O14727 AP001011.1-202ENST00000581172 667 ntTSL 3 BASIC5.66□□□□□ -1.5
APAF1O14727 AC129510.2-201ENST00000582774 345 ntTSL 5 BASIC5.66□□□□□ -1.5
APAF1O14727 DYNAP-202ENST00000585973 1102 ntAPPRIS ALT2 TSL 3 BASIC5.66□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 75.4 ms