Protein–RNA interactions for Protein: F8WFD2

NPIPA3, Nuclear pore complex-interacting protein family member A3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3F8WFD2 AL672167.3-201ENST00000465951 960 ntBASIC4.09□□□□□ -1.75
NPIPA3F8WFD2 AC015724.1-201ENST00000478577 156 ntBASIC4.09□□□□□ -1.75
NPIPA3F8WFD2 LINC02017-201ENST00000496829 474 ntTSL 3 BASIC4.09□□□□□ -1.75
NPIPA3F8WFD2 ARL4AP1-201ENST00000503220 705 ntBASIC4.09□□□□□ -1.75
NPIPA3F8WFD2 RNU6-416P-201ENST00000516265 103 ntBASIC4.09□□□□□ -1.75
NPIPA3F8WFD2 AC068880.2-201ENST00000521016 362 ntTSL 5 BASIC4.09□□□□□ -1.75
NPIPA3F8WFD2 IGJP1-201ENST00000522682 475 ntBASIC4.09□□□□□ -1.75
NPIPA3F8WFD2 MIR100HG-213ENST00000531470 560 ntTSL 4 BASIC4.09□□□□□ -1.75
NPIPA3F8WFD2 GYPA-211ENST00000535709 695 ntAPPRIS ALT2 TSL 1 (best) BASIC4.09□□□□□ -1.75
NPIPA3F8WFD2 NIFKP8-201ENST00000560500 874 ntBASIC4.09□□□□□ -1.75
NPIPA3F8WFD2 LINC2194-201ENST00000567127 454 ntTSL 3 BASIC4.09□□□□□ -1.75
NPIPA3F8WFD2 AC090844.2-203ENST00000582263 632 ntTSL 5 BASIC4.09□□□□□ -1.75
NPIPA3F8WFD2 ARF4P1-201ENST00000605447 541 ntBASIC4.09□□□□□ -1.75
NPIPA3F8WFD2 LINC01440-205ENST00000608080 737 ntTSL 3 BASIC4.09□□□□□ -1.75
NPIPA3F8WFD2 AL391834.2-201ENST00000609982 546 ntBASIC4.09□□□□□ -1.75
NPIPA3F8WFD2 AL353726.1-201ENST00000614041 1000 ntBASIC4.09□□□□□ -1.75
NPIPA3F8WFD2 AC022106.2-201ENST00000620114 757 ntBASIC4.09□□□□□ -1.75
NPIPA3F8WFD2 AC007527.2-201ENST00000621825 546 ntTSL 5 BASIC4.09□□□□□ -1.75
NPIPA3F8WFD2 DDAH1-206ENST00000633113 703 ntTSL 2 BASIC4.09□□□□□ -1.75
NPIPA3F8WFD2 AC013437.2-201ENST00000639587 677 ntBASIC4.09□□□□□ -1.75
NPIPA3F8WFD2 ZCCHC7-202ENST00000336755 2619 ntAPPRIS P1 TSL 2 BASIC4.09□□□□□ -1.75
NPIPA3F8WFD2 TUG1-201ENST00000519077 5673 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
NPIPA3F8WFD2 CLCA1-201ENST00000234701 3310 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.76
NPIPA3F8WFD2 ABI3BP-215ENST00000495063 3714 ntTSL 1 (best) BASIC4.09□□□□□ -1.76
NPIPA3F8WFD2 ALG6-201ENST00000263440 1895 ntAPPRIS ALT1 TSL 5 BASIC4.09□□□□□ -1.76
NPIPA3F8WFD2 SCAF11-212ENST00000549162 3934 ntTSL 1 (best) BASIC4.09□□□□□ -1.76
NPIPA3F8WFD2 EMSY-207ENST00000525919 4074 ntAPPRIS ALT1 TSL 1 (best) BASIC4.09□□□□□ -1.76
NPIPA3F8WFD2 CEP152-203ENST00000399334 5097 ntAPPRIS P3 TSL 1 (best) BASIC4.08□□□□□ -1.76
NPIPA3F8WFD2 CENPF-201ENST00000366955 10307 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
NPIPA3F8WFD2 F8-202ENST00000360256 9059 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
NPIPA3F8WFD2 LGALS13-201ENST00000221797 602 ntAPPRIS P2 TSL 1 (best) BASIC4.08□□□□□ -1.76
NPIPA3F8WFD2 AL512646.1-201ENST00000269395 1077 ntBASIC4.08□□□□□ -1.76
NPIPA3F8WFD2 RPL26-201ENST00000293842 524 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
NPIPA3F8WFD2 RNU6-984P-201ENST00000363236 109 ntBASIC4.08□□□□□ -1.76
NPIPA3F8WFD2 SNORA51.12-201ENST00000384448 134 ntBASIC4.08□□□□□ -1.76
NPIPA3F8WFD2 RNU6-925P-201ENST00000384629 104 ntBASIC4.08□□□□□ -1.76
NPIPA3F8WFD2 POLR1D-202ENST00000399696 668 ntAPPRIS ALT1 TSL 5 BASIC4.08□□□□□ -1.76
NPIPA3F8WFD2 MIR921-201ENST00000401133 56 ntBASIC4.08□□□□□ -1.76
NPIPA3F8WFD2 RSL24D1P1-201ENST00000404972 493 ntBASIC4.08□□□□□ -1.76
NPIPA3F8WFD2 RPL21P108-201ENST00000413857 481 ntBASIC4.08□□□□□ -1.76
NPIPA3F8WFD2 TMSB10P2-201ENST00000416049 131 ntBASIC4.08□□□□□ -1.76
NPIPA3F8WFD2 TCEA1P2-201ENST00000420496 906 ntBASIC4.08□□□□□ -1.76
NPIPA3F8WFD2 Z74021.1-201ENST00000423610 407 ntBASIC4.08□□□□□ -1.76
NPIPA3F8WFD2 GTF2IP2-201ENST00000424290 697 ntBASIC4.08□□□□□ -1.76
NPIPA3F8WFD2 ZNF736P7Y-201ENST00000425158 820 ntBASIC4.08□□□□□ -1.76
NPIPA3F8WFD2 AL136084.2-202ENST00000433997 353 ntTSL 2 BASIC4.08□□□□□ -1.76
NPIPA3F8WFD2 AC105402.2-201ENST00000438503 358 ntBASIC4.08□□□□□ -1.76
NPIPA3F8WFD2 AC024597.1-201ENST00000442753 706 ntTSL 5 BASIC4.08□□□□□ -1.76
NPIPA3F8WFD2 AL592437.1-201ENST00000443781 492 ntBASIC4.08□□□□□ -1.76
NPIPA3F8WFD2 AL162388.1-201ENST00000450912 352 ntBASIC4.08□□□□□ -1.76
NPIPA3F8WFD2 HMGB3P21-201ENST00000452483 547 ntBASIC4.08□□□□□ -1.76
NPIPA3F8WFD2 IFNWP4-201ENST00000453148 294 ntBASIC4.08□□□□□ -1.76
NPIPA3F8WFD2 AL160408.1-203ENST00000453568 631 ntTSL 5 BASIC4.08□□□□□ -1.76
NPIPA3F8WFD2 MTATP6P14-201ENST00000455189 673 ntBASIC4.08□□□□□ -1.76
NPIPA3F8WFD2 NDUFAF4P3-201ENST00000456468 525 ntBASIC4.08□□□□□ -1.76
NPIPA3F8WFD2 AC104689.1-201ENST00000473356 768 ntBASIC4.08□□□□□ -1.76
NPIPA3F8WFD2 AC091959.2-201ENST00000477363 321 ntBASIC4.08□□□□□ -1.76
NPIPA3F8WFD2 AC104982.1-201ENST00000478775 574 ntBASIC4.08□□□□□ -1.76
NPIPA3F8WFD2 SNCA-AS1-201ENST00000501215 2646 ntTSL 2 BASIC4.08□□□□□ -1.76
NPIPA3F8WFD2 EMB-205ENST00000514111 1475 ntAPPRIS ALT2 TSL 2 BASIC4.08□□□□□ -1.76
NPIPA3F8WFD2 LINC02465-204ENST00000514892 481 ntTSL 2 BASIC4.08□□□□□ -1.76
NPIPA3F8WFD2 AP001207.3-201ENST00000520268 491 ntTSL 3 BASIC4.08□□□□□ -1.76
NPIPA3F8WFD2 AF233439.1-201ENST00000526235 401 ntTSL 3 BASIC4.08□□□□□ -1.76
NPIPA3F8WFD2 PRB1-204ENST00000546254 1170 ntAPPRIS ALT2 TSL 5 BASIC4.08□□□□□ -1.76
NPIPA3F8WFD2 LINC02404-201ENST00000546710 1188 ntTSL 5 BASIC4.08□□□□□ -1.76
NPIPA3F8WFD2 AC084757.1-201ENST00000559987 490 ntBASIC4.08□□□□□ -1.76
NPIPA3F8WFD2 MTCO1P40-201ENST00000574371 625 ntBASIC4.08□□□□□ -1.76
NPIPA3F8WFD2 VN1R87P-201ENST00000596706 487 ntBASIC4.08□□□□□ -1.76
NPIPA3F8WFD2 MIR6716-201ENST00000613413 80 ntBASIC4.08□□□□□ -1.76
NPIPA3F8WFD2 AC243756.2-201ENST00000618406 463 ntBASIC4.08□□□□□ -1.76
NPIPA3F8WFD2 AL627171.1-201ENST00000618845 1308 ntBASIC4.08□□□□□ -1.76
NPIPA3F8WFD2 PDCD6IPP1-202ENST00000622242 1064 ntBASIC4.08□□□□□ -1.76
NPIPA3F8WFD2 DLG2-AS1_1.1-201ENST00000622319 213 ntBASIC4.08□□□□□ -1.76
NPIPA3F8WFD2 TEX41-256ENST00000626411 368 ntTSL 5 BASIC4.08□□□□□ -1.76
NPIPA3F8WFD2 LINC00836-203ENST00000628620 1179 ntTSL 5 BASIC4.08□□□□□ -1.76
NPIPA3F8WFD2 AC008703.1-201ENST00000637629 1174 ntTSL 5 BASIC4.08□□□□□ -1.76
NPIPA3F8WFD2 BX649567.1-201ENST00000642071 1134 ntBASIC4.08□□□□□ -1.76
NPIPA3F8WFD2 CNOT1-201ENST00000317147 8471 ntAPPRIS P3 TSL 1 (best) BASIC4.08□□□□□ -1.76
NPIPA3F8WFD2 PCDH15-208ENST00000395432 6901 ntTSL 5 BASIC4.08□□□□□ -1.76
NPIPA3F8WFD2 SCEL-205ENST00000535157 3096 ntAPPRIS ALT2 TSL 2 BASIC4.08□□□□□ -1.76
NPIPA3F8WFD2 NABP1-205ENST00000425611 1878 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
NPIPA3F8WFD2 RIMS1-204ENST00000401910 3542 ntTSL 2 BASIC4.07□□□□□ -1.76
NPIPA3F8WFD2 OSBPL6-201ENST00000190611 10513 ntAPPRIS P3 TSL 1 (best) BASIC4.07□□□□□ -1.76
NPIPA3F8WFD2 FAM169A-203ENST00000510496 5810 ntTSL 5 BASIC4.07□□□□□ -1.76
NPIPA3F8WFD2 RAG2-209ENST00000618712 2818 ntAPPRIS P1 TSL 4 BASIC4.07□□□□□ -1.76
NPIPA3F8WFD2 LINC02240-201ENST00000564199 1336 ntTSL 2 BASIC4.07□□□□□ -1.76
NPIPA3F8WFD2 AC016716.1-201ENST00000265882 708 ntBASIC4.07□□□□□ -1.76
NPIPA3F8WFD2 MUCL1-201ENST00000308796 470 ntAPPRIS P2 TSL 1 (best) BASIC4.07□□□□□ -1.76
NPIPA3F8WFD2 RN7SKP227-201ENST00000364445 330 ntBASIC4.07□□□□□ -1.76
NPIPA3F8WFD2 RNU6-298P-201ENST00000390888 96 ntBASIC4.07□□□□□ -1.76
NPIPA3F8WFD2 OR6C69P-201ENST00000394268 893 ntBASIC4.07□□□□□ -1.76
NPIPA3F8WFD2 RPL7P27-201ENST00000403775 720 ntBASIC4.07□□□□□ -1.76
NPIPA3F8WFD2 RNU6-272P-201ENST00000411028 104 ntBASIC4.07□□□□□ -1.76
NPIPA3F8WFD2 AC011933.1-201ENST00000413334 321 ntBASIC4.07□□□□□ -1.76
NPIPA3F8WFD2 SNRPFP1-201ENST00000414761 252 ntBASIC4.07□□□□□ -1.76
NPIPA3F8WFD2 AC013410.2-201ENST00000422627 201 ntBASIC4.07□□□□□ -1.76
NPIPA3F8WFD2 LINC01934-202ENST00000424170 686 ntTSL 4 BASIC4.07□□□□□ -1.76
NPIPA3F8WFD2 AL451140.1-201ENST00000430534 371 ntTSL 3 BASIC4.07□□□□□ -1.76
NPIPA3F8WFD2 RPS29P17-201ENST00000430795 166 ntBASIC4.07□□□□□ -1.76
NPIPA3F8WFD2 AC234064.1-201ENST00000436312 247 ntBASIC4.07□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 98.1 ms