Protein–RNA interactions for Protein: E9PIF3

NPIPA2, Nuclear pore complex-interacting protein family member A2, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA2E9PIF3 AC013727.1-201ENST00000618581 839 ntTSL 5 BASIC3.98□□□□□ -1.77
NPIPA2E9PIF3 AL163051.2-201ENST00000618976 735 ntBASIC3.98□□□□□ -1.77
NPIPA2E9PIF3 AL161616.2-201ENST00000622001 565 ntTSL 4 BASIC3.98□□□□□ -1.77
NPIPA2E9PIF3 TMEM255A-202ENST00000371352 2879 ntTSL 2 BASIC3.98□□□□□ -1.77
NPIPA2E9PIF3 ARL15-202ENST00000504924 2486 ntAPPRIS P2 TSL 1 (best) BASIC3.98□□□□□ -1.77
NPIPA2E9PIF3 ARL15-207ENST00000620747 2486 ntAPPRIS ALT1 TSL 5 BASIC3.98□□□□□ -1.77
NPIPA2E9PIF3 ATP2C1-212ENST00000507488 3579 ntAPPRIS ALT2 TSL 2 BASIC3.98□□□□□ -1.77
NPIPA2E9PIF3 RC3H2-203ENST00000373670 9248 ntAPPRIS P1 TSL 5 BASIC3.98□□□□□ -1.77
NPIPA2E9PIF3 LINC00283-201ENST00000430111 1947 ntTSL 5 BASIC3.97□□□□□ -1.77
NPIPA2E9PIF3 RAP1GDS1-205ENST00000408927 3681 ntAPPRIS P3 TSL 2 BASIC3.97□□□□□ -1.77
NPIPA2E9PIF3 ELAVL4-206ENST00000371827 3775 ntAPPRIS ALT1 TSL 1 (best) BASIC3.97□□□□□ -1.77
NPIPA2E9PIF3 MIR448-201ENST00000362131 111 ntBASIC3.97□□□□□ -1.77
NPIPA2E9PIF3 MIR195-201ENST00000385194 87 ntBASIC3.97□□□□□ -1.77
NPIPA2E9PIF3 RNA5SP372-201ENST00000390836 115 ntBASIC3.97□□□□□ -1.77
NPIPA2E9PIF3 HNRNPDP2-201ENST00000406475 478 ntBASIC3.97□□□□□ -1.77
NPIPA2E9PIF3 AL158050.1-201ENST00000416077 457 ntBASIC3.97□□□□□ -1.77
NPIPA2E9PIF3 AC079163.1-201ENST00000418416 407 ntTSL 2 BASIC3.97□□□□□ -1.77
NPIPA2E9PIF3 CYP4F29P-201ENST00000420685 446 ntBASIC3.97□□□□□ -1.77
NPIPA2E9PIF3 RPL7P53-201ENST00000421245 739 ntBASIC3.97□□□□□ -1.77
NPIPA2E9PIF3 FKBP7-205ENST00000434643 666 ntAPPRIS ALT2 TSL 1 (best) BASIC3.97□□□□□ -1.77
NPIPA2E9PIF3 AP000844.1-201ENST00000446631 577 ntTSL 3 BASIC3.97□□□□□ -1.77
NPIPA2E9PIF3 AC036101.1-201ENST00000449272 597 ntTSL 3 BASIC3.97□□□□□ -1.77
NPIPA2E9PIF3 AC010894.4-201ENST00000454203 457 ntTSL 3 BASIC3.97□□□□□ -1.77
NPIPA2E9PIF3 ATP5G1P3-201ENST00000463301 410 ntBASIC3.97□□□□□ -1.77
NPIPA2E9PIF3 RPL21P71-201ENST00000465598 459 ntBASIC3.97□□□□□ -1.77
NPIPA2E9PIF3 AL035404.1-201ENST00000497982 568 ntBASIC3.97□□□□□ -1.77
NPIPA2E9PIF3 AC146944.2-203ENST00000502493 354 ntBASIC3.97□□□□□ -1.77
NPIPA2E9PIF3 AC024579.1-201ENST00000503685 371 ntTSL 5 BASIC3.97□□□□□ -1.77
NPIPA2E9PIF3 MTATP6P22-201ENST00000507369 598 ntBASIC3.97□□□□□ -1.77
NPIPA2E9PIF3 STMN1P2-201ENST00000508435 439 ntBASIC3.97□□□□□ -1.77
NPIPA2E9PIF3 AC093297.2-204ENST00000508945 295 ntTSL 3 BASIC3.97□□□□□ -1.77
NPIPA2E9PIF3 AC139495.1-202ENST00000513164 354 ntBASIC3.97□□□□□ -1.77
NPIPA2E9PIF3 AC026402.1-201ENST00000513642 170 ntBASIC3.97□□□□□ -1.77
NPIPA2E9PIF3 LINC02492-204ENST00000515660 584 ntTSL 2 BASIC3.97□□□□□ -1.77
NPIPA2E9PIF3 AC130462.1-201ENST00000548144 549 ntTSL 5 BASIC3.97□□□□□ -1.77
NPIPA2E9PIF3 LINC02326-201ENST00000552028 540 ntTSL 3 BASIC3.97□□□□□ -1.77
NPIPA2E9PIF3 AC007424.1-205ENST00000552615 579 ntTSL 4 BASIC3.97□□□□□ -1.77
NPIPA2E9PIF3 AC023034.1-201ENST00000558141 518 ntTSL 3 BASIC3.97□□□□□ -1.77
NPIPA2E9PIF3 AC138207.6-203ENST00000581652 565 ntTSL 4 BASIC3.97□□□□□ -1.77
NPIPA2E9PIF3 TTN-AS1-217ENST00000585625 945 ntTSL 5 BASIC3.97□□□□□ -1.77
NPIPA2E9PIF3 STARD13-AS-208ENST00000589472 859 ntTSL 5 BASIC3.97□□□□□ -1.77
NPIPA2E9PIF3 VN1R79P-201ENST00000593540 513 ntBASIC3.97□□□□□ -1.77
NPIPA2E9PIF3 AC069304.3-201ENST00000603938 1084 ntBASIC3.97□□□□□ -1.77
NPIPA2E9PIF3 AC007546.2-201ENST00000623996 360 ntBASIC3.97□□□□□ -1.77
NPIPA2E9PIF3 AC097372.4-201ENST00000625025 466 ntBASIC3.97□□□□□ -1.77
NPIPA2E9PIF3 MIR3653-201ENST00000625572 110 ntBASIC3.97□□□□□ -1.77
NPIPA2E9PIF3 SATB1-AS1-237ENST00000626982 735 ntTSL 5 BASIC3.97□□□□□ -1.77
NPIPA2E9PIF3 AL928596.1-201ENST00000636738 632 ntTSL 2 BASIC3.97□□□□□ -1.77
NPIPA2E9PIF3 U6.107-201ENST00000637108 79 ntBASIC3.97□□□□□ -1.77
NPIPA2E9PIF3 FTO-223ENST00000640179 210 ntTSL 5 BASIC3.97□□□□□ -1.77
NPIPA2E9PIF3 U2SURP-214ENST00000493598 3491 ntTSL 5 BASIC3.97□□□□□ -1.77
NPIPA2E9PIF3 MS4A1-201ENST00000345732 3331 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
NPIPA2E9PIF3 MARK2P15-201ENST00000432204 2186 ntBASIC3.97□□□□□ -1.77
NPIPA2E9PIF3 NOL8P1-201ENST00000508336 3529 ntBASIC3.97□□□□□ -1.77
NPIPA2E9PIF3 AC011266.1-201ENST00000624119 3569 ntBASIC3.97□□□□□ -1.77
NPIPA2E9PIF3 EIF2AP4-201ENST00000424793 1781 ntBASIC3.97□□□□□ -1.77
NPIPA2E9PIF3 CFHR3-205ENST00000471440 1965 ntTSL 1 (best) BASIC3.96□□□□□ -1.77
NPIPA2E9PIF3 LMNTD1-202ENST00000413632 1520 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
NPIPA2E9PIF3 GTF2H1-204ENST00000524753 1510 ntTSL 3 BASIC3.96□□□□□ -1.78
NPIPA2E9PIF3 U2SURP-208ENST00000473835 7276 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
NPIPA2E9PIF3 C8orf34-202ENST00000337103 3652 ntAPPRIS ALT2 TSL 1 (best) BASIC3.96□□□□□ -1.78
NPIPA2E9PIF3 OR8J3-203ENST00000641913 3047 ntAPPRIS P1 BASIC3.96□□□□□ -1.78
NPIPA2E9PIF3 CDR1-201ENST00000370532 2467 ntAPPRIS P1 BASIC3.96□□□□□ -1.78
NPIPA2E9PIF3 SCN3A-201ENST00000283254 9091 ntAPPRIS P3 TSL 1 (best) BASIC3.96□□□□□ -1.78
NPIPA2E9PIF3 OR6Y1-202ENST00000641282 3702 ntAPPRIS P1 BASIC3.96□□□□□ -1.78
NPIPA2E9PIF3 MIR383-201ENST00000362257 73 ntBASIC3.96□□□□□ -1.78
NPIPA2E9PIF3 RNU1-132P-201ENST00000364300 164 ntBASIC3.96□□□□□ -1.78
NPIPA2E9PIF3 MIR3065-201ENST00000390137 79 ntBASIC3.96□□□□□ -1.78
NPIPA2E9PIF3 RPL31-204ENST00000409038 817 ntTSL 2 BASIC3.96□□□□□ -1.78
NPIPA2E9PIF3 RN7SKP263-201ENST00000411194 309 ntBASIC3.96□□□□□ -1.78
NPIPA2E9PIF3 AC108681.1-202ENST00000417384 589 ntTSL 4 BASIC3.96□□□□□ -1.78
NPIPA2E9PIF3 AC097467.3-223ENST00000417474 449 ntTSL 3 BASIC3.96□□□□□ -1.78
NPIPA2E9PIF3 AL360093.1-201ENST00000420237 1126 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
NPIPA2E9PIF3 DYDC1-203ENST00000421924 708 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
NPIPA2E9PIF3 MTCO2P1-201ENST00000424648 477 ntBASIC3.96□□□□□ -1.78
NPIPA2E9PIF3 AL132765.1-201ENST00000434165 553 ntBASIC3.96□□□□□ -1.78
NPIPA2E9PIF3 AC105402.2-201ENST00000438503 358 ntBASIC3.96□□□□□ -1.78
NPIPA2E9PIF3 AL162419.1-201ENST00000440674 873 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
NPIPA2E9PIF3 AC005358.1-201ENST00000445508 1143 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
NPIPA2E9PIF3 ZNF736P6Y-201ENST00000447526 1213 ntBASIC3.96□□□□□ -1.78
NPIPA2E9PIF3 AC114755.5-201ENST00000447760 831 ntBASIC3.96□□□□□ -1.78
NPIPA2E9PIF3 TTTY23B-202ENST00000451467 512 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
NPIPA2E9PIF3 TTTY23-201ENST00000452889 512 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
NPIPA2E9PIF3 AL645608.2-201ENST00000458555 471 ntTSL 2 BASIC3.96□□□□□ -1.78
NPIPA2E9PIF3 RPL7P19-201ENST00000469948 618 ntBASIC3.96□□□□□ -1.78
NPIPA2E9PIF3 RN7SL812P-201ENST00000493791 279 ntBASIC3.96□□□□□ -1.78
NPIPA2E9PIF3 AC092994.1-201ENST00000498604 279 ntTSL 3 BASIC3.96□□□□□ -1.78
NPIPA2E9PIF3 AC020593.1-201ENST00000507399 299 ntBASIC3.96□□□□□ -1.78
NPIPA2E9PIF3 AC108475.1-201ENST00000507880 950 ntBASIC3.96□□□□□ -1.78
NPIPA2E9PIF3 AC016598.2-201ENST00000514942 525 ntTSL 5 BASIC3.96□□□□□ -1.78
NPIPA2E9PIF3 MIR2116-201ENST00000517221 80 ntBASIC3.96□□□□□ -1.78
NPIPA2E9PIF3 AF117829.1-202ENST00000524166 836 ntTSL 3 BASIC3.96□□□□□ -1.78
NPIPA2E9PIF3 AC055878.1-201ENST00000531858 281 ntTSL 3 BASIC3.96□□□□□ -1.78
NPIPA2E9PIF3 TRDN-204ENST00000542443 1294 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
NPIPA2E9PIF3 TVP23BP1-201ENST00000557500 617 ntBASIC3.96□□□□□ -1.78
NPIPA2E9PIF3 MIR3160-1-201ENST00000577972 85 ntBASIC3.96□□□□□ -1.78
NPIPA2E9PIF3 ZNF836-203ENST00000597065 808 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
NPIPA2E9PIF3 PDZPH1P-202ENST00000602846 722 ntTSL 3 BASIC3.96□□□□□ -1.78
NPIPA2E9PIF3 AC090181.2-201ENST00000602975 672 ntBASIC3.96□□□□□ -1.78
NPIPA2E9PIF3 AC098483.2-201ENST00000603158 454 ntBASIC3.96□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 76.3 ms