Protein–RNA interactions for Protein: Q99698

LYST, Lysosomal-trafficking regulator, humanhuman

Predictions only

Length 3,801 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSTQ99698 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC13.42□□□□□ -0.26
LYSTQ99698 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
LYSTQ99698 HLA-A-209ENST00000638375 975 ntBASIC13.42□□□□□ -0.26
LYSTQ99698 AC116351.2-201ENST00000606540 1585 ntBASIC13.42□□□□□ -0.26
LYSTQ99698 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
LYSTQ99698 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC13.42□□□□□ -0.26
LYSTQ99698 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
LYSTQ99698 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
LYSTQ99698 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
LYSTQ99698 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
LYSTQ99698 TSPY12P-201ENST00000421279 868 ntBASIC13.42□□□□□ -0.26
LYSTQ99698 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC13.42□□□□□ -0.26
LYSTQ99698 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC13.42□□□□□ -0.26
LYSTQ99698 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
LYSTQ99698 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC13.42□□□□□ -0.26
LYSTQ99698 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
LYSTQ99698 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
LYSTQ99698 AL512408.1-201ENST00000569378 2000 ntBASIC13.42□□□□□ -0.26
LYSTQ99698 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC13.42□□□□□ -0.26
LYSTQ99698 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC13.41□□□□□ -0.26
LYSTQ99698 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC13.41□□□□□ -0.26
LYSTQ99698 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC13.41□□□□□ -0.26
LYSTQ99698 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC13.41□□□□□ -0.26
LYSTQ99698 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
LYSTQ99698 AC007225.1-201ENST00000566331 1836 ntBASIC13.41□□□□□ -0.26
LYSTQ99698 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC13.41□□□□□ -0.26
LYSTQ99698 TEX30-205ENST00000376029 959 ntTSL 2 BASIC13.41□□□□□ -0.26
LYSTQ99698 AL353719.1-201ENST00000566847 864 ntBASIC13.41□□□□□ -0.26
LYSTQ99698 AC120114.3-201ENST00000611923 658 ntBASIC13.41□□□□□ -0.26
LYSTQ99698 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
LYSTQ99698 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC13.41□□□□□ -0.26
LYSTQ99698 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC13.41□□□□□ -0.26
LYSTQ99698 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
LYSTQ99698 IL9RP2-201ENST00000423948 1312 ntBASIC13.41□□□□□ -0.26
LYSTQ99698 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
LYSTQ99698 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
LYSTQ99698 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
LYSTQ99698 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC13.41□□□□□ -0.26
LYSTQ99698 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
LYSTQ99698 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
LYSTQ99698 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC13.4□□□□□ -0.26
LYSTQ99698 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
LYSTQ99698 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.26
LYSTQ99698 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.26
LYSTQ99698 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
LYSTQ99698 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC13.4□□□□□ -0.26
LYSTQ99698 LINC02084-201ENST00000606069 1096 ntBASIC13.4□□□□□ -0.26
LYSTQ99698 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
LYSTQ99698 AC011298.2-201ENST00000617989 482 ntBASIC13.4□□□□□ -0.26
LYSTQ99698 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
LYSTQ99698 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
LYSTQ99698 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
LYSTQ99698 BID-203ENST00000399765 1879 ntTSL 2 BASIC13.4□□□□□ -0.26
LYSTQ99698 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
LYSTQ99698 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
LYSTQ99698 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC13.4□□□□□ -0.26
LYSTQ99698 GLIPR1L1-202ENST00000378695 885 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
LYSTQ99698 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC13.4□□□□□ -0.26
LYSTQ99698 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
LYSTQ99698 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC13.4□□□□□ -0.26
LYSTQ99698 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC13.4□□□□□ -0.26
LYSTQ99698 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC13.4□□□□□ -0.26
LYSTQ99698 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
LYSTQ99698 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
LYSTQ99698 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
LYSTQ99698 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
LYSTQ99698 AL157384.1-201ENST00000445995 2473 ntBASIC13.4□□□□□ -0.26
LYSTQ99698 ME2-216ENST00000639850 2331 ntTSL 5 BASIC13.4□□□□□ -0.26
LYSTQ99698 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
LYSTQ99698 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
LYSTQ99698 FEM1AP1-201ENST00000431297 1995 ntBASIC13.4□□□□□ -0.26
LYSTQ99698 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
LYSTQ99698 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC13.4□□□□□ -0.26
LYSTQ99698 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
LYSTQ99698 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
LYSTQ99698 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC13.4□□□□□ -0.26
LYSTQ99698 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC13.4□□□□□ -0.26
LYSTQ99698 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
LYSTQ99698 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
LYSTQ99698 AC092597.1-201ENST00000487352 616 ntBASIC13.4□□□□□ -0.26
LYSTQ99698 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
LYSTQ99698 FGF14-AS2-201ENST00000606448 1074 ntBASIC13.4□□□□□ -0.26
LYSTQ99698 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.27
LYSTQ99698 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
LYSTQ99698 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
LYSTQ99698 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
LYSTQ99698 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
LYSTQ99698 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
LYSTQ99698 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
LYSTQ99698 KRT18P31-201ENST00000506277 1292 ntBASIC13.39□□□□□ -0.27
LYSTQ99698 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
LYSTQ99698 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
LYSTQ99698 AC022898.2-201ENST00000616822 1312 ntBASIC13.39□□□□□ -0.27
LYSTQ99698 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC13.39□□□□□ -0.27
LYSTQ99698 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC13.39□□□□□ -0.27
LYSTQ99698 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
LYSTQ99698 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
LYSTQ99698 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
LYSTQ99698 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
LYSTQ99698 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC13.39□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 21.2 ms