Protein–RNA interactions for Protein: Q969T4

UBE2E3, Ubiquitin-conjugating enzyme E2 E3, humanhuman

Predictions only

Length 207 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2E3Q969T4 POU5F1P3-201ENST00000428824 1078 ntBASIC18.6■□□□□ 0.57
UBE2E3Q969T4 AC133681.1-201ENST00000465482 601 ntBASIC18.6■□□□□ 0.57
UBE2E3Q969T4 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC18.6■□□□□ 0.57
UBE2E3Q969T4 LY6E-205ENST00000519611 635 ntTSL 3 BASIC18.6■□□□□ 0.57
UBE2E3Q969T4 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC18.6■□□□□ 0.57
UBE2E3Q969T4 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
UBE2E3Q969T4 IRX5-204ENST00000560154 879 ntTSL 5 BASIC18.6■□□□□ 0.57
UBE2E3Q969T4 RN7SL471P-201ENST00000580476 299 ntBASIC18.6■□□□□ 0.57
UBE2E3Q969T4 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
UBE2E3Q969T4 AC073648.6-201ENST00000641589 218 ntBASIC18.6■□□□□ 0.57
UBE2E3Q969T4 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC18.6■□□□□ 0.57
UBE2E3Q969T4 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC18.6■□□□□ 0.57
UBE2E3Q969T4 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
UBE2E3Q969T4 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC18.6■□□□□ 0.57
UBE2E3Q969T4 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC18.6■□□□□ 0.57
UBE2E3Q969T4 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
UBE2E3Q969T4 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
UBE2E3Q969T4 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
UBE2E3Q969T4 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
UBE2E3Q969T4 AC104417.2-201ENST00000562989 1793 ntBASIC18.6■□□□□ 0.57
UBE2E3Q969T4 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
UBE2E3Q969T4 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC18.6■□□□□ 0.57
UBE2E3Q969T4 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
UBE2E3Q969T4 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
UBE2E3Q969T4 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
UBE2E3Q969T4 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
UBE2E3Q969T4 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
UBE2E3Q969T4 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC18.59■□□□□ 0.57
UBE2E3Q969T4 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
UBE2E3Q969T4 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC18.59■□□□□ 0.57
UBE2E3Q969T4 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC18.59■□□□□ 0.57
UBE2E3Q969T4 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
UBE2E3Q969T4 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC18.59■□□□□ 0.57
UBE2E3Q969T4 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
UBE2E3Q969T4 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC18.59■□□□□ 0.57
UBE2E3Q969T4 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
UBE2E3Q969T4 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
UBE2E3Q969T4 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC18.59■□□□□ 0.57
UBE2E3Q969T4 KRT16P5-201ENST00000455284 522 ntBASIC18.59■□□□□ 0.57
UBE2E3Q969T4 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
UBE2E3Q969T4 C1QL1P1-201ENST00000568105 661 ntBASIC18.59■□□□□ 0.57
UBE2E3Q969T4 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC18.59■□□□□ 0.57
UBE2E3Q969T4 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
UBE2E3Q969T4 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
UBE2E3Q969T4 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
UBE2E3Q969T4 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
UBE2E3Q969T4 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC18.59■□□□□ 0.57
UBE2E3Q969T4 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC18.59■□□□□ 0.57
UBE2E3Q969T4 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC18.59■□□□□ 0.57
UBE2E3Q969T4 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
UBE2E3Q969T4 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC18.59■□□□□ 0.57
UBE2E3Q969T4 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC18.59■□□□□ 0.57
UBE2E3Q969T4 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
UBE2E3Q969T4 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC18.58■□□□□ 0.57
UBE2E3Q969T4 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC18.58■□□□□ 0.57
UBE2E3Q969T4 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
UBE2E3Q969T4 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.57
UBE2E3Q969T4 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.57
UBE2E3Q969T4 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
UBE2E3Q969T4 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC18.58■□□□□ 0.57
UBE2E3Q969T4 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
UBE2E3Q969T4 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC18.58■□□□□ 0.57
UBE2E3Q969T4 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC18.58■□□□□ 0.57
UBE2E3Q969T4 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
UBE2E3Q969T4 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.56
UBE2E3Q969T4 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC18.58■□□□□ 0.56
UBE2E3Q969T4 FAM201B-201ENST00000458407 597 ntBASIC18.58■□□□□ 0.56
UBE2E3Q969T4 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC18.58■□□□□ 0.56
UBE2E3Q969T4 AC110285.5-201ENST00000611501 352 ntBASIC18.58■□□□□ 0.56
UBE2E3Q969T4 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
UBE2E3Q969T4 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC18.58■□□□□ 0.56
UBE2E3Q969T4 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC18.58■□□□□ 0.56
UBE2E3Q969T4 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
UBE2E3Q969T4 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC18.58■□□□□ 0.56
UBE2E3Q969T4 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
UBE2E3Q969T4 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC18.57■□□□□ 0.56
UBE2E3Q969T4 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
UBE2E3Q969T4 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
UBE2E3Q969T4 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
UBE2E3Q969T4 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC18.57■□□□□ 0.56
UBE2E3Q969T4 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
UBE2E3Q969T4 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
UBE2E3Q969T4 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
UBE2E3Q969T4 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC18.57■□□□□ 0.56
UBE2E3Q969T4 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC18.57■□□□□ 0.56
UBE2E3Q969T4 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
UBE2E3Q969T4 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
UBE2E3Q969T4 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
UBE2E3Q969T4 ISG20-202ENST00000379224 540 ntTSL 3 BASIC18.57■□□□□ 0.56
UBE2E3Q969T4 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC18.57■□□□□ 0.56
UBE2E3Q969T4 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC18.57■□□□□ 0.56
UBE2E3Q969T4 AC128676.1-201ENST00000454392 318 ntBASIC18.57■□□□□ 0.56
UBE2E3Q969T4 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
UBE2E3Q969T4 AC124016.1-201ENST00000609552 612 ntBASIC18.57■□□□□ 0.56
UBE2E3Q969T4 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC18.57■□□□□ 0.56
UBE2E3Q969T4 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
UBE2E3Q969T4 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
UBE2E3Q969T4 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
UBE2E3Q969T4 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
UBE2E3Q969T4 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC18.57■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 27.3 ms