Protein–RNA interactions for Protein: Q93084

ATP2A3, Sarcoplasmic/endoplasmic reticulum calcium ATPase 3, humanhuman

Predictions only

Length 1,043 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A3Q93084 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC20.35■□□□□ 0.85
ATP2A3Q93084 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
ATP2A3Q93084 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC20.35■□□□□ 0.85
ATP2A3Q93084 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
ATP2A3Q93084 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
ATP2A3Q93084 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
ATP2A3Q93084 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC20.35■□□□□ 0.85
ATP2A3Q93084 AC116562.2-201ENST00000507042 360 ntBASIC20.35■□□□□ 0.85
ATP2A3Q93084 TK2-213ENST00000563369 882 ntTSL 5 BASIC20.35■□□□□ 0.85
ATP2A3Q93084 C1QL1P1-201ENST00000568105 661 ntBASIC20.35■□□□□ 0.85
ATP2A3Q93084 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC20.35■□□□□ 0.85
ATP2A3Q93084 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC20.35■□□□□ 0.85
ATP2A3Q93084 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC20.35■□□□□ 0.85
ATP2A3Q93084 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
ATP2A3Q93084 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC20.35■□□□□ 0.85
ATP2A3Q93084 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC20.35■□□□□ 0.85
ATP2A3Q93084 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC20.35■□□□□ 0.85
ATP2A3Q93084 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC20.34■□□□□ 0.85
ATP2A3Q93084 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
ATP2A3Q93084 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC20.34■□□□□ 0.85
ATP2A3Q93084 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC20.34■□□□□ 0.85
ATP2A3Q93084 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC20.34■□□□□ 0.85
ATP2A3Q93084 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC20.34■□□□□ 0.85
ATP2A3Q93084 MIR1238-201ENST00000408483 83 ntBASIC20.34■□□□□ 0.85
ATP2A3Q93084 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC20.34■□□□□ 0.85
ATP2A3Q93084 YBX1P10-201ENST00000444752 975 ntBASIC20.34■□□□□ 0.85
ATP2A3Q93084 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC20.34■□□□□ 0.85
ATP2A3Q93084 AC145285.6-201ENST00000604632 637 ntBASIC20.34■□□□□ 0.85
ATP2A3Q93084 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC20.34■□□□□ 0.85
ATP2A3Q93084 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC20.34■□□□□ 0.85
ATP2A3Q93084 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
ATP2A3Q93084 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
ATP2A3Q93084 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
ATP2A3Q93084 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC20.34■□□□□ 0.85
ATP2A3Q93084 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
ATP2A3Q93084 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC20.34■□□□□ 0.85
ATP2A3Q93084 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC20.33■□□□□ 0.85
ATP2A3Q93084 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
ATP2A3Q93084 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC20.33■□□□□ 0.85
ATP2A3Q93084 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
ATP2A3Q93084 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
ATP2A3Q93084 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC20.33■□□□□ 0.85
ATP2A3Q93084 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
ATP2A3Q93084 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC20.33■□□□□ 0.85
ATP2A3Q93084 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC20.33■□□□□ 0.85
ATP2A3Q93084 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC20.33■□□□□ 0.85
ATP2A3Q93084 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC20.33■□□□□ 0.85
ATP2A3Q93084 AL031985.4-201ENST00000642138 673 ntBASIC20.33■□□□□ 0.85
ATP2A3Q93084 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.84
ATP2A3Q93084 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.84
ATP2A3Q93084 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.84
ATP2A3Q93084 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC20.33■□□□□ 0.84
ATP2A3Q93084 TFP1-202ENST00000475455 1573 ntBASIC20.33■□□□□ 0.84
ATP2A3Q93084 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.84
ATP2A3Q93084 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
ATP2A3Q93084 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC20.32■□□□□ 0.84
ATP2A3Q93084 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
ATP2A3Q93084 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC20.32■□□□□ 0.84
ATP2A3Q93084 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC20.32■□□□□ 0.84
ATP2A3Q93084 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
ATP2A3Q93084 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC20.32■□□□□ 0.84
ATP2A3Q93084 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC20.32■□□□□ 0.84
ATP2A3Q93084 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC20.32■□□□□ 0.84
ATP2A3Q93084 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
ATP2A3Q93084 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
ATP2A3Q93084 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC20.32■□□□□ 0.84
ATP2A3Q93084 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC20.32■□□□□ 0.84
ATP2A3Q93084 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC20.32■□□□□ 0.84
ATP2A3Q93084 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC20.32■□□□□ 0.84
ATP2A3Q93084 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC20.32■□□□□ 0.84
ATP2A3Q93084 MIR6786-201ENST00000616843 113 ntBASIC20.32■□□□□ 0.84
ATP2A3Q93084 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
ATP2A3Q93084 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
ATP2A3Q93084 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC20.32■□□□□ 0.84
ATP2A3Q93084 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
ATP2A3Q93084 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
ATP2A3Q93084 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
ATP2A3Q93084 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
ATP2A3Q93084 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC20.32■□□□□ 0.84
ATP2A3Q93084 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
ATP2A3Q93084 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
ATP2A3Q93084 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC20.31■□□□□ 0.84
ATP2A3Q93084 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
ATP2A3Q93084 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
ATP2A3Q93084 AC018553.1-201ENST00000616682 1458 ntBASIC20.31■□□□□ 0.84
ATP2A3Q93084 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC20.31■□□□□ 0.84
ATP2A3Q93084 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC20.31■□□□□ 0.84
ATP2A3Q93084 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
ATP2A3Q93084 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC20.31■□□□□ 0.84
ATP2A3Q93084 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC20.31■□□□□ 0.84
ATP2A3Q93084 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC20.31■□□□□ 0.84
ATP2A3Q93084 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
ATP2A3Q93084 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC20.31■□□□□ 0.84
ATP2A3Q93084 AC026271.3-201ENST00000571884 352 ntBASIC20.31■□□□□ 0.84
ATP2A3Q93084 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
ATP2A3Q93084 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
ATP2A3Q93084 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC20.31■□□□□ 0.84
ATP2A3Q93084 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
ATP2A3Q93084 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC20.31■□□□□ 0.84
ATP2A3Q93084 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 33.7 ms