Protein–RNA interactions for Protein: Q8WXH0

SYNE2, Nesprin-2, humanhuman

Known RBP Predictions only

Length 6,885 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2Q8WXH0 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC7.88□□□□□ -1.15
SYNE2Q8WXH0 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC7.88□□□□□ -1.15
SYNE2Q8WXH0 AL078644.1-201ENST00000609881 752 ntBASIC7.88□□□□□ -1.15
SYNE2Q8WXH0 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC7.88□□□□□ -1.15
SYNE2Q8WXH0 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
SYNE2Q8WXH0 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
SYNE2Q8WXH0 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC7.88□□□□□ -1.15
SYNE2Q8WXH0 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC7.88□□□□□ -1.15
SYNE2Q8WXH0 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC7.88□□□□□ -1.15
SYNE2Q8WXH0 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
SYNE2Q8WXH0 IGHV3-7-201ENST00000390598 430 ntAPPRIS P1 BASIC7.88□□□□□ -1.15
SYNE2Q8WXH0 ARSEP1-201ENST00000420443 635 ntBASIC7.88□□□□□ -1.15
SYNE2Q8WXH0 AL357497.1-201ENST00000436249 666 ntTSL 3 BASIC7.88□□□□□ -1.15
SYNE2Q8WXH0 AC139149.1-202ENST00000442532 783 ntTSL 3 BASIC7.88□□□□□ -1.15
SYNE2Q8WXH0 AC002472.2-201ENST00000442739 958 ntBASIC7.88□□□□□ -1.15
SYNE2Q8WXH0 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC7.88□□□□□ -1.15
SYNE2Q8WXH0 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
SYNE2Q8WXH0 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC7.88□□□□□ -1.15
SYNE2Q8WXH0 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC7.88□□□□□ -1.15
SYNE2Q8WXH0 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC7.88□□□□□ -1.15
SYNE2Q8WXH0 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
SYNE2Q8WXH0 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
SYNE2Q8WXH0 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC7.87□□□□□ -1.15
SYNE2Q8WXH0 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC7.87□□□□□ -1.15
SYNE2Q8WXH0 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC7.87□□□□□ -1.15
SYNE2Q8WXH0 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC7.87□□□□□ -1.15
SYNE2Q8WXH0 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC7.87□□□□□ -1.15
SYNE2Q8WXH0 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC7.87□□□□□ -1.15
SYNE2Q8WXH0 LINC00628-201ENST00000628516 1289 ntBASIC7.87□□□□□ -1.15
SYNE2Q8WXH0 HDGF-201ENST00000357325 2380 ntAPPRIS P1 TSL 1 (best) BASIC7.87□□□□□ -1.15
SYNE2Q8WXH0 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC7.87□□□□□ -1.15
SYNE2Q8WXH0 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC7.87□□□□□ -1.15
SYNE2Q8WXH0 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC7.87□□□□□ -1.15
SYNE2Q8WXH0 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC7.87□□□□□ -1.15
SYNE2Q8WXH0 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC7.87□□□□□ -1.15
SYNE2Q8WXH0 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC7.87□□□□□ -1.15
SYNE2Q8WXH0 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC7.87□□□□□ -1.15
SYNE2Q8WXH0 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC7.87□□□□□ -1.15
SYNE2Q8WXH0 EMC4-203ENST00000557879 1009 ntTSL 3 BASIC7.87□□□□□ -1.15
SYNE2Q8WXH0 AL591684.3-201ENST00000605187 298 ntBASIC7.87□□□□□ -1.15
SYNE2Q8WXH0 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC7.87□□□□□ -1.15
SYNE2Q8WXH0 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC7.87□□□□□ -1.15
SYNE2Q8WXH0 RNF126P1-202ENST00000569893 925 ntBASIC7.87□□□□□ -1.15
SYNE2Q8WXH0 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC7.87□□□□□ -1.15
SYNE2Q8WXH0 YTHDF3-AS1-201ENST00000603538 718 ntBASIC7.87□□□□□ -1.15
SYNE2Q8WXH0 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC7.87□□□□□ -1.15
SYNE2Q8WXH0 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC7.87□□□□□ -1.15
SYNE2Q8WXH0 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC7.87□□□□□ -1.15
SYNE2Q8WXH0 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC7.87□□□□□ -1.15
SYNE2Q8WXH0 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC7.87□□□□□ -1.15
SYNE2Q8WXH0 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC7.87□□□□□ -1.15
SYNE2Q8WXH0 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC7.87□□□□□ -1.15
SYNE2Q8WXH0 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC7.87□□□□□ -1.15
SYNE2Q8WXH0 NSUN5P1-202ENST00000421140 1535 ntBASIC7.87□□□□□ -1.15
SYNE2Q8WXH0 NSUN5P2-203ENST00000457352 1529 ntBASIC7.87□□□□□ -1.15
SYNE2Q8WXH0 RPS2P28-201ENST00000314255 741 ntBASIC7.87□□□□□ -1.15
SYNE2Q8WXH0 VCX3A-201ENST00000381089 995 ntAPPRIS P2 TSL 1 (best) BASIC7.87□□□□□ -1.15
SYNE2Q8WXH0 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC7.87□□□□□ -1.15
SYNE2Q8WXH0 AC142086.6-201ENST00000621154 1765 ntBASIC7.87□□□□□ -1.15
SYNE2Q8WXH0 TEX12-201ENST00000280358 1147 ntAPPRIS P1 TSL 1 (best) BASIC7.87□□□□□ -1.15
SYNE2Q8WXH0 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC7.87□□□□□ -1.15
SYNE2Q8WXH0 SSR4-204ENST00000370087 745 ntAPPRIS P1 TSL 3 BASIC7.87□□□□□ -1.15
SYNE2Q8WXH0 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC7.87□□□□□ -1.15
SYNE2Q8WXH0 ALG1L5P-201ENST00000482043 771 ntBASIC7.87□□□□□ -1.15
SYNE2Q8WXH0 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC7.87□□□□□ -1.15
SYNE2Q8WXH0 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC7.87□□□□□ -1.15
SYNE2Q8WXH0 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC7.87□□□□□ -1.15
SYNE2Q8WXH0 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC7.87□□□□□ -1.15
SYNE2Q8WXH0 GAD2-202ENST00000376248 680 ntTSL 5 BASIC7.87□□□□□ -1.15
SYNE2Q8WXH0 RAC2-204ENST00000406508 893 ntTSL 5 BASIC7.87□□□□□ -1.15
SYNE2Q8WXH0 LINC00351-201ENST00000424926 911 ntTSL 3 BASIC7.87□□□□□ -1.15
SYNE2Q8WXH0 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC7.87□□□□□ -1.15
SYNE2Q8WXH0 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC7.87□□□□□ -1.15
SYNE2Q8WXH0 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC7.87□□□□□ -1.15
SYNE2Q8WXH0 PDLIM3-213ENST00000629667 1016 ntTSL 5 BASIC7.87□□□□□ -1.15
SYNE2Q8WXH0 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC7.86□□□□□ -1.15
SYNE2Q8WXH0 FZD2-201ENST00000315323 2112 ntAPPRIS P1 BASIC7.86□□□□□ -1.15
SYNE2Q8WXH0 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC7.86□□□□□ -1.15
SYNE2Q8WXH0 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC7.86□□□□□ -1.15
SYNE2Q8WXH0 CD82-202ENST00000342935 967 ntTSL 5 BASIC7.86□□□□□ -1.15
SYNE2Q8WXH0 TPT1-AS1-203ENST00000412946 744 ntTSL 3 BASIC7.86□□□□□ -1.15
SYNE2Q8WXH0 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC7.86□□□□□ -1.15
SYNE2Q8WXH0 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC7.86□□□□□ -1.15
SYNE2Q8WXH0 MIR5100-201ENST00000579544 119 ntBASIC7.86□□□□□ -1.15
SYNE2Q8WXH0 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC7.86□□□□□ -1.15
SYNE2Q8WXH0 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC7.86□□□□□ -1.15
SYNE2Q8WXH0 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC7.86□□□□□ -1.15
SYNE2Q8WXH0 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC7.86□□□□□ -1.15
SYNE2Q8WXH0 AC068898.1-201ENST00000440750 335 ntTSL 3 BASIC7.86□□□□□ -1.15
SYNE2Q8WXH0 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC7.86□□□□□ -1.15
SYNE2Q8WXH0 AC091607.1-201ENST00000490318 1060 ntBASIC7.86□□□□□ -1.15
SYNE2Q8WXH0 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC7.86□□□□□ -1.15
SYNE2Q8WXH0 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC7.86□□□□□ -1.15
SYNE2Q8WXH0 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC7.86□□□□□ -1.15
SYNE2Q8WXH0 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC7.86□□□□□ -1.15
SYNE2Q8WXH0 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC7.86□□□□□ -1.15
SYNE2Q8WXH0 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC7.86□□□□□ -1.15
SYNE2Q8WXH0 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC7.86□□□□□ -1.15
SYNE2Q8WXH0 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC7.86□□□□□ -1.15
SYNE2Q8WXH0 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC7.86□□□□□ -1.15
Retrieved 100 of 98,524 protein–RNA pairs in 21.3 ms