Protein–RNA interactions for Protein: P09341

CXCL1, Growth-regulated alpha protein, humanhuman

Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL1P09341 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
CXCL1P09341 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC15□□□□□ -0.01
CXCL1P09341 Z98044.1-201ENST00000632503 1764 ntBASIC15□□□□□ -0.01
CXCL1P09341 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC15□□□□□ -0.01
CXCL1P09341 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC15□□□□□ -0.01
CXCL1P09341 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC15□□□□□ -0.01
CXCL1P09341 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
CXCL1P09341 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
CXCL1P09341 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
CXCL1P09341 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC15□□□□□ -0.01
CXCL1P09341 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC15□□□□□ -0.01
CXCL1P09341 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC15□□□□□ -0.01
CXCL1P09341 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC14.99□□□□□ -0.01
CXCL1P09341 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CXCL1P09341 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC14.99□□□□□ -0.01
CXCL1P09341 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC14.99□□□□□ -0.01
CXCL1P09341 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CXCL1P09341 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
CXCL1P09341 AC061975.6-201ENST00000579045 1553 ntBASIC14.99□□□□□ -0.01
CXCL1P09341 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
CXCL1P09341 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC14.99□□□□□ -0.01
CXCL1P09341 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CXCL1P09341 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
CXCL1P09341 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC14.99□□□□□ -0.01
CXCL1P09341 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
CXCL1P09341 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CXCL1P09341 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CXCL1P09341 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC14.99□□□□□ -0.01
CXCL1P09341 AL356441.2-201ENST00000443009 864 ntBASIC14.99□□□□□ -0.01
CXCL1P09341 AC131281.2-201ENST00000520478 145 ntBASIC14.99□□□□□ -0.01
CXCL1P09341 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC14.99□□□□□ -0.01
CXCL1P09341 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
CXCL1P09341 AC080080.1-201ENST00000625121 2420 ntBASIC14.99□□□□□ -0.01
CXCL1P09341 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
CXCL1P09341 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
CXCL1P09341 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC14.99□□□□□ -0.01
CXCL1P09341 HTR7P1-202ENST00000624664 4411 ntBASIC14.99□□□□□ -0.01
CXCL1P09341 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
CXCL1P09341 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC14.99□□□□□ -0.01
CXCL1P09341 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
CXCL1P09341 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
CXCL1P09341 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
CXCL1P09341 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
CXCL1P09341 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
CXCL1P09341 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CXCL1P09341 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
CXCL1P09341 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CXCL1P09341 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC14.98□□□□□ -0.01
CXCL1P09341 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
CXCL1P09341 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC14.98□□□□□ -0.01
CXCL1P09341 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
CXCL1P09341 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC14.98□□□□□ -0.01
CXCL1P09341 FP475955.4-201ENST00000623131 1990 ntBASIC14.98□□□□□ -0.01
CXCL1P09341 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CXCL1P09341 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC14.98□□□□□ -0.01
CXCL1P09341 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
CXCL1P09341 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
CXCL1P09341 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
CXCL1P09341 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC14.98□□□□□ -0.01
CXCL1P09341 AC245052.3-201ENST00000450182 901 ntBASIC14.98□□□□□ -0.01
CXCL1P09341 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CXCL1P09341 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
CXCL1P09341 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
CXCL1P09341 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CXCL1P09341 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC14.98□□□□□ -0.01
CXCL1P09341 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
CXCL1P09341 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
CXCL1P09341 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
CXCL1P09341 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
CXCL1P09341 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC14.98□□□□□ -0.01
CXCL1P09341 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CXCL1P09341 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CXCL1P09341 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC14.98□□□□□ -0.01
CXCL1P09341 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
CXCL1P09341 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC14.98□□□□□ -0.01
CXCL1P09341 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
CXCL1P09341 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC14.97□□□□□ -0.01
CXCL1P09341 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CXCL1P09341 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CXCL1P09341 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CXCL1P09341 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC14.97□□□□□ -0.01
CXCL1P09341 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CXCL1P09341 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC14.97□□□□□ -0.01
CXCL1P09341 AC018695.7-201ENST00000624587 2492 ntBASIC14.97□□□□□ -0.01
CXCL1P09341 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC14.97□□□□□ -0.01
CXCL1P09341 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
CXCL1P09341 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
CXCL1P09341 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC14.97□□□□□ -0.01
CXCL1P09341 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
CXCL1P09341 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC14.97□□□□□ -0.01
CXCL1P09341 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
CXCL1P09341 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CXCL1P09341 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
CXCL1P09341 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC14.97□□□□□ -0.01
CXCL1P09341 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
CXCL1P09341 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
CXCL1P09341 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
CXCL1P09341 AC093525.10-201ENST00000625130 1569 ntBASIC14.97□□□□□ -0.01
CXCL1P09341 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC14.97□□□□□ -0.01
CXCL1P09341 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 27.1 ms