Protein–RNA interactions for Protein: O70228

Atp9a, Probable phospholipid-transporting ATPase IIA, mousemouse

Predictions only

Length 1,047 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atp9aO70228 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Atp9aO70228 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Atp9aO70228 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Atp9aO70228 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Atp9aO70228 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Atp9aO70228 Atp6v1b2-201ENSMUST00000006435 2825 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Atp9aO70228 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Atp9aO70228 Zbtb45-201ENSMUST00000051390 2171 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Atp9aO70228 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Atp9aO70228 Atp5b-201ENSMUST00000026459 1916 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Atp9aO70228 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
Atp9aO70228 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Atp9aO70228 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Atp9aO70228 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Atp9aO70228 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Atp9aO70228 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Atp9aO70228 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
Atp9aO70228 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC18.29■□□□□ 0.52
Atp9aO70228 Gm12216-201ENSMUST00000117316 1152 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Atp9aO70228 Zscan10-204ENSMUST00000118369 1006 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Atp9aO70228 Cklf-201ENSMUST00000034342 667 ntAPPRIS P4 TSL 1 (best) BASIC18.29■□□□□ 0.52
Atp9aO70228 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Atp9aO70228 Adprh-201ENSMUST00000002923 1583 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Atp9aO70228 Gm16401-202ENSMUST00000197463 2074 ntBASIC18.29■□□□□ 0.52
Atp9aO70228 Kcnk10-203ENSMUST00000221305 1357 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Atp9aO70228 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Atp9aO70228 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Atp9aO70228 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Atp9aO70228 Fam159b-201ENSMUST00000043061 1310 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Atp9aO70228 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Atp9aO70228 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
Atp9aO70228 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Atp9aO70228 Fgf20-202ENSMUST00000118639 587 ntTSL 3 BASIC18.28■□□□□ 0.52
Atp9aO70228 Gm15372-201ENSMUST00000120729 834 ntBASIC18.28■□□□□ 0.52
Atp9aO70228 2410004I01Rik-201ENSMUST00000138424 1187 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Atp9aO70228 Gm13054-201ENSMUST00000154192 820 ntTSL 3 BASIC18.28■□□□□ 0.52
Atp9aO70228 Flg-202ENSMUST00000178008 768 ntAPPRIS ALT2 BASIC18.28■□□□□ 0.52
Atp9aO70228 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC18.28■□□□□ 0.52
Atp9aO70228 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC18.28■□□□□ 0.52
Atp9aO70228 Gm27459-201ENSMUST00000184860 107 ntBASIC18.28■□□□□ 0.52
Atp9aO70228 Ssr2-205ENSMUST00000193934 569 ntTSL 3 BASIC18.28■□□□□ 0.52
Atp9aO70228 Lmo1-203ENSMUST00000208136 772 ntTSL 2 BASIC18.28■□□□□ 0.52
Atp9aO70228 Arhgap33-206ENSMUST00000208522 781 ntTSL 3 BASIC18.28■□□□□ 0.52
Atp9aO70228 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Atp9aO70228 Agk-201ENSMUST00000031977 2531 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Atp9aO70228 Hpca-203ENSMUST00000116442 1568 ntAPPRIS P1 TSL 3 BASIC18.28■□□□□ 0.52
Atp9aO70228 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Atp9aO70228 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
Atp9aO70228 Fbxo33-201ENSMUST00000043204 3688 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Atp9aO70228 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Atp9aO70228 F830208F22Rik-202ENSMUST00000143732 2891 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Atp9aO70228 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Atp9aO70228 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Atp9aO70228 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Atp9aO70228 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Atp9aO70228 Mamstr-201ENSMUST00000148532 1606 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Atp9aO70228 Hmbs-201ENSMUST00000077353 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Atp9aO70228 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Atp9aO70228 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Atp9aO70228 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Atp9aO70228 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Atp9aO70228 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Atp9aO70228 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Atp9aO70228 Slc19a2-204ENSMUST00000169394 894 ntTSL 5 BASIC18.27■□□□□ 0.52
Atp9aO70228 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
Atp9aO70228 Sbsn-203ENSMUST00000182229 732 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Atp9aO70228 Olfr601-201ENSMUST00000080474 990 ntAPPRIS P1 BASIC18.27■□□□□ 0.52
Atp9aO70228 Rhog-201ENSMUST00000098230 1269 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Atp9aO70228 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC18.27■□□□□ 0.52
Atp9aO70228 Shd-201ENSMUST00000044216 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.51
Atp9aO70228 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.51
Atp9aO70228 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC18.27■□□□□ 0.51
Atp9aO70228 Hexb-201ENSMUST00000022169 1905 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Atp9aO70228 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Atp9aO70228 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
Atp9aO70228 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Atp9aO70228 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Atp9aO70228 Gm36858-201ENSMUST00000194501 2391 ntBASIC18.26■□□□□ 0.51
Atp9aO70228 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
Atp9aO70228 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Atp9aO70228 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC18.26■□□□□ 0.51
Atp9aO70228 Gm12963-201ENSMUST00000131846 783 ntTSL 5 BASIC18.26■□□□□ 0.51
Atp9aO70228 5430416N02Rik-202ENSMUST00000181873 626 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Atp9aO70228 Hs3st2-202ENSMUST00000206880 1149 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Atp9aO70228 AC133598.3-202ENSMUST00000224219 531 ntBASIC18.26■□□□□ 0.51
Atp9aO70228 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Atp9aO70228 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Atp9aO70228 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC18.26■□□□□ 0.51
Atp9aO70228 Mipep-201ENSMUST00000063562 3015 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Atp9aO70228 Coq6-201ENSMUST00000021661 1602 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Atp9aO70228 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Atp9aO70228 Jdp2-202ENSMUST00000171754 1559 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Atp9aO70228 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
Atp9aO70228 Slc25a3-206ENSMUST00000170810 1341 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
Atp9aO70228 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC18.25■□□□□ 0.51
Atp9aO70228 Enpp1-202ENSMUST00000105520 6777 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
Atp9aO70228 AC121598.2-201ENSMUST00000228376 2325 ntBASIC18.25■□□□□ 0.51
Atp9aO70228 Rnf13-209ENSMUST00000199041 1062 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Atp9aO70228 Wdr13-202ENSMUST00000115623 1749 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
Atp9aO70228 Lonp2-201ENSMUST00000034141 2860 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 105 ms