Protein–RNA interactions for Protein: Q9Y2B5

VPS9D1, VPS9 domain-containing protein 1, humanhuman

Predictions only

Length 631 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1Q9Y2B5 RNA5SP396-201ENST00000364834 120 ntBASIC7.17□□□□□ -1.26
VPS9D1Q9Y2B5 SNORD20-201ENST00000384550 80 ntBASIC7.17□□□□□ -1.26
VPS9D1Q9Y2B5 RNU6-959P-201ENST00000384671 107 ntBASIC7.17□□□□□ -1.26
VPS9D1Q9Y2B5 Y_RNA.576-201ENST00000384781 102 ntBASIC7.17□□□□□ -1.26
VPS9D1Q9Y2B5 AL138885.1-201ENST00000405921 675 ntBASIC7.17□□□□□ -1.26
VPS9D1Q9Y2B5 RNU2-5P-201ENST00000410533 180 ntBASIC7.17□□□□□ -1.26
VPS9D1Q9Y2B5 PVALB-204ENST00000417718 569 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
VPS9D1Q9Y2B5 AC016724.1-201ENST00000453215 421 ntBASIC7.17□□□□□ -1.26
VPS9D1Q9Y2B5 AC079896.1-201ENST00000455845 488 ntTSL 3 BASIC7.17□□□□□ -1.26
VPS9D1Q9Y2B5 AC117395.2-201ENST00000463122 1128 ntBASIC7.17□□□□□ -1.26
VPS9D1Q9Y2B5 AC091021.1-201ENST00000468051 388 ntBASIC7.17□□□□□ -1.26
VPS9D1Q9Y2B5 RN7SL688P-201ENST00000471754 275 ntBASIC7.17□□□□□ -1.26
VPS9D1Q9Y2B5 AC106892.1-201ENST00000491608 406 ntTSL 3 BASIC7.17□□□□□ -1.26
VPS9D1Q9Y2B5 AC104806.1-201ENST00000508720 308 ntBASIC7.17□□□□□ -1.26
VPS9D1Q9Y2B5 CBX3P8-201ENST00000532412 525 ntBASIC7.17□□□□□ -1.26
VPS9D1Q9Y2B5 AC068631.3-201ENST00000538831 225 ntBASIC7.17□□□□□ -1.26
VPS9D1Q9Y2B5 PRR4-206ENST00000540107 388 ntAPPRIS ALT2 TSL 3 BASIC7.17□□□□□ -1.26
VPS9D1Q9Y2B5 OR5AP2-201ENST00000544374 1006 ntAPPRIS P1 BASIC7.17□□□□□ -1.26
VPS9D1Q9Y2B5 DYNLL1P4-201ENST00000549314 266 ntBASIC7.17□□□□□ -1.26
VPS9D1Q9Y2B5 AC106782.4-201ENST00000568264 210 ntBASIC7.17□□□□□ -1.26
VPS9D1Q9Y2B5 RN7SL667P-201ENST00000582817 298 ntBASIC7.17□□□□□ -1.26
VPS9D1Q9Y2B5 BOLA2P1-201ENST00000584794 232 ntBASIC7.17□□□□□ -1.26
VPS9D1Q9Y2B5 RPSAP66-201ENST00000592196 606 ntBASIC7.17□□□□□ -1.26
VPS9D1Q9Y2B5 RPS29P30-201ENST00000600975 111 ntBASIC7.17□□□□□ -1.26
VPS9D1Q9Y2B5 LINC02112-205ENST00000606744 236 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
VPS9D1Q9Y2B5 AC243829.4-202ENST00000610845 410 ntTSL 5 BASIC7.17□□□□□ -1.26
VPS9D1Q9Y2B5 HOTTIP_2.1-201ENST00000616633 376 ntBASIC7.17□□□□□ -1.26
VPS9D1Q9Y2B5 IL13-206ENST00000617259 498 ntAPPRIS ALT2 TSL 5 BASIC7.17□□□□□ -1.26
VPS9D1Q9Y2B5 AL590227.1-201ENST00000622616 315 ntTSL 5 BASIC7.17□□□□□ -1.26
VPS9D1Q9Y2B5 AC087893.2-201ENST00000623272 255 ntBASIC7.17□□□□□ -1.26
VPS9D1Q9Y2B5 CTSLP2-203ENST00000628708 493 ntTSL 5 BASIC7.17□□□□□ -1.26
VPS9D1Q9Y2B5 AC073488.7-201ENST00000633785 778 ntBASIC7.17□□□□□ -1.26
VPS9D1Q9Y2B5 5_8S_rRNA.6-201ENST00000637374 152 ntBASIC7.17□□□□□ -1.26
VPS9D1Q9Y2B5 MDM4-216ENST00000616250 9597 ntTSL 5 BASIC7.17□□□□□ -1.26
VPS9D1Q9Y2B5 AC026316.3-201ENST00000497988 3097 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
VPS9D1Q9Y2B5 SOS2-202ENST00000543680 3960 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
VPS9D1Q9Y2B5 OR51M1-203ENST00000642046 4092 ntAPPRIS P1 BASIC7.17□□□□□ -1.26
VPS9D1Q9Y2B5 AC011460.1-201ENST00000636268 1834 ntBASIC7.17□□□□□ -1.26
VPS9D1Q9Y2B5 LMOD2-202ENST00000458573 2346 ntAPPRIS P1 TSL 2 BASIC7.17□□□□□ -1.26
VPS9D1Q9Y2B5 LINC01375-201ENST00000428485 1860 ntTSL 2 BASIC7.17□□□□□ -1.26
VPS9D1Q9Y2B5 NFAT5-202ENST00000354436 13229 ntAPPRIS P4 TSL 1 (best) BASIC7.17□□□□□ -1.26
VPS9D1Q9Y2B5 NPIPB5-205ENST00000424340 3801 ntAPPRIS P2 TSL 1 (best) BASIC7.17□□□□□ -1.26
VPS9D1Q9Y2B5 OR3A3-203ENST00000641141 3800 ntAPPRIS P1 BASIC7.17□□□□□ -1.26
VPS9D1Q9Y2B5 AL627309.5-201ENST00000484859 4860 ntTSL 5 BASIC7.17□□□□□ -1.26
VPS9D1Q9Y2B5 ORC3-206ENST00000546266 2470 ntTSL 2 BASIC7.17□□□□□ -1.26
VPS9D1Q9Y2B5 CLSTN2-201ENST00000458420 14202 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
VPS9D1Q9Y2B5 BX322650.1-201ENST00000332359 2143 ntBASIC7.16□□□□□ -1.26
VPS9D1Q9Y2B5 AC099673.1-201ENST00000452199 2296 ntTSL 2 BASIC7.16□□□□□ -1.26
VPS9D1Q9Y2B5 SPTA1-201ENST00000368147 7999 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
VPS9D1Q9Y2B5 EIF4G2-208ENST00000526148 4001 ntAPPRIS ALT2 TSL 1 (best) BASIC7.16□□□□□ -1.26
VPS9D1Q9Y2B5 MED6-212ENST00000615788 1700 ntTSL 5 BASIC7.16□□□□□ -1.26
VPS9D1Q9Y2B5 GABRA1-211ENST00000635880 1739 ntAPPRIS P1 TSL 5 BASIC7.16□□□□□ -1.26
VPS9D1Q9Y2B5 NREP-206ENST00000447165 2304 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
VPS9D1Q9Y2B5 ASAH1-267ENST00000637991 2399 ntTSL 5 BASIC7.16□□□□□ -1.26
VPS9D1Q9Y2B5 HSPA8P1-201ENST00000425843 1833 ntBASIC7.16□□□□□ -1.26
VPS9D1Q9Y2B5 TSHZ2-202ENST00000371497 12187 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
VPS9D1Q9Y2B5 ODF2L-202ENST00000317336 4376 ntTSL 5 BASIC7.16□□□□□ -1.26
VPS9D1Q9Y2B5 RNU6-28P-201ENST00000362378 107 ntBASIC7.16□□□□□ -1.26
VPS9D1Q9Y2B5 RNU6-858P-201ENST00000362436 107 ntBASIC7.16□□□□□ -1.26
VPS9D1Q9Y2B5 RNY3P11-201ENST00000364153 102 ntBASIC7.16□□□□□ -1.26
VPS9D1Q9Y2B5 RNU6-1317P-201ENST00000364582 104 ntBASIC7.16□□□□□ -1.26
VPS9D1Q9Y2B5 SNORA70.8-201ENST00000384231 136 ntBASIC7.16□□□□□ -1.26
VPS9D1Q9Y2B5 Y_RNA.471-201ENST00000384312 102 ntBASIC7.16□□□□□ -1.26
VPS9D1Q9Y2B5 AC008060.2-201ENST00000415333 468 ntTSL 3 BASIC7.16□□□□□ -1.26
VPS9D1Q9Y2B5 AC133106.1-201ENST00000419029 397 ntTSL 3 BASIC7.16□□□□□ -1.26
VPS9D1Q9Y2B5 RPL31P45-201ENST00000419532 356 ntBASIC7.16□□□□□ -1.26
VPS9D1Q9Y2B5 ZNF880-203ENST00000424032 558 ntTSL 4 BASIC7.16□□□□□ -1.26
VPS9D1Q9Y2B5 CYP4F32P-201ENST00000426492 504 ntBASIC7.16□□□□□ -1.26
VPS9D1Q9Y2B5 AL445305.1-201ENST00000432577 575 ntBASIC7.16□□□□□ -1.26
VPS9D1Q9Y2B5 AL354983.1-201ENST00000434580 906 ntBASIC7.16□□□□□ -1.26
VPS9D1Q9Y2B5 TBX18-AS1-202ENST00000441863 382 ntTSL 2 BASIC7.16□□□□□ -1.26
VPS9D1Q9Y2B5 PRDX1P1-201ENST00000449329 596 ntBASIC7.16□□□□□ -1.26
VPS9D1Q9Y2B5 HMGN3P1-201ENST00000453847 193 ntBASIC7.16□□□□□ -1.26
VPS9D1Q9Y2B5 AC108059.3-201ENST00000456388 214 ntBASIC7.16□□□□□ -1.26
VPS9D1Q9Y2B5 AL592464.2-201ENST00000457440 607 ntTSL 2 BASIC7.16□□□□□ -1.26
VPS9D1Q9Y2B5 AC004692.2-202ENST00000458680 478 ntTSL 3 BASIC7.16□□□□□ -1.26
VPS9D1Q9Y2B5 RNU7-27P-201ENST00000459281 62 ntBASIC7.16□□□□□ -1.26
VPS9D1Q9Y2B5 RN7SL308P-201ENST00000464971 297 ntBASIC7.16□□□□□ -1.26
VPS9D1Q9Y2B5 AC109925.1-201ENST00000478069 331 ntBASIC7.16□□□□□ -1.26
VPS9D1Q9Y2B5 RN7SL152P-201ENST00000484176 298 ntBASIC7.16□□□□□ -1.26
VPS9D1Q9Y2B5 RN7SL647P-201ENST00000485429 300 ntBASIC7.16□□□□□ -1.26
VPS9D1Q9Y2B5 RN7SL445P-201ENST00000495609 293 ntBASIC7.16□□□□□ -1.26
VPS9D1Q9Y2B5 AC092336.1-201ENST00000510562 415 ntTSL 3 BASIC7.16□□□□□ -1.26
VPS9D1Q9Y2B5 RNU6-202P-201ENST00000515998 96 ntBASIC7.16□□□□□ -1.26
VPS9D1Q9Y2B5 SNORA14.1-201ENST00000516113 141 ntBASIC7.16□□□□□ -1.26
VPS9D1Q9Y2B5 RNU7-4P-201ENST00000516961 62 ntBASIC7.16□□□□□ -1.26
VPS9D1Q9Y2B5 AC091987.1-201ENST00000517758 464 ntTSL 3 BASIC7.16□□□□□ -1.26
VPS9D1Q9Y2B5 DEFB108E-201ENST00000524692 240 ntBASIC7.16□□□□□ -1.26
VPS9D1Q9Y2B5 AP000842.2-202ENST00000526211 569 ntTSL 4 BASIC7.16□□□□□ -1.26
VPS9D1Q9Y2B5 AP000593.3-201ENST00000546065 578 ntTSL 2 BASIC7.16□□□□□ -1.26
VPS9D1Q9Y2B5 AC026371.1-201ENST00000551867 419 ntBASIC7.16□□□□□ -1.26
VPS9D1Q9Y2B5 AC090115.3-201ENST00000553218 849 ntBASIC7.16□□□□□ -1.26
VPS9D1Q9Y2B5 AC010333.1-201ENST00000563116 563 ntTSL 4 BASIC7.16□□□□□ -1.26
VPS9D1Q9Y2B5 AC092138.1-201ENST00000568659 472 ntTSL 2 BASIC7.16□□□□□ -1.26
VPS9D1Q9Y2B5 AC092121.1-201ENST00000569452 202 ntBASIC7.16□□□□□ -1.26
VPS9D1Q9Y2B5 AC004584.2-201ENST00000570407 410 ntBASIC7.16□□□□□ -1.26
VPS9D1Q9Y2B5 AC022884.2-201ENST00000578535 580 ntBASIC7.16□□□□□ -1.26
VPS9D1Q9Y2B5 TPGS2-204ENST00000587129 841 ntTSL 4 BASIC7.16□□□□□ -1.26
VPS9D1Q9Y2B5 U2.17-201ENST00000611454 95 ntBASIC7.16□□□□□ -1.26
VPS9D1Q9Y2B5 TSPAN6-205ENST00000614008 900 ntTSL 5 BASIC7.16□□□□□ -1.26
Retrieved 100 of 98,524 protein–RNA pairs in 114 ms