Protein–RNA interactions for Protein: Q9ULL8

SHROOM4, Protein Shroom4, humanhuman

Predictions only

Length 1,493 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM4Q9ULL8 LINC02488-201ENST00000504287 652 ntTSL 2 BASIC7.81□□□□□ -1.16
SHROOM4Q9ULL8 AC026427.2-201ENST00000506228 536 ntBASIC7.81□□□□□ -1.16
SHROOM4Q9ULL8 LINC02325-202ENST00000554260 567 ntTSL 4 BASIC7.81□□□□□ -1.16
SHROOM4Q9ULL8 AC010601.1-202ENST00000567304 547 ntTSL 4 BASIC7.81□□□□□ -1.16
SHROOM4Q9ULL8 AC097460.3-201ENST00000623099 442 ntBASIC7.81□□□□□ -1.16
SHROOM4Q9ULL8 AC135584.1-201ENST00000624438 333 ntTSL 5 BASIC7.81□□□□□ -1.16
SHROOM4Q9ULL8 AC097372.4-201ENST00000625025 466 ntBASIC7.81□□□□□ -1.16
SHROOM4Q9ULL8 FMO2-201ENST00000209929 3851 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
SHROOM4Q9ULL8 CEP192-203ENST00000506447 7960 ntAPPRIS P2 TSL 5 BASIC7.81□□□□□ -1.16
SHROOM4Q9ULL8 ABCA12-201ENST00000272895 9100 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
SHROOM4Q9ULL8 ZNF962P-201ENST00000443465 3140 ntBASIC7.81□□□□□ -1.16
SHROOM4Q9ULL8 ACEA_U3.1-201ENST00000363057 217 ntBASIC7.81□□□□□ -1.16
SHROOM4Q9ULL8 RNU6-609P-201ENST00000365459 107 ntBASIC7.81□□□□□ -1.16
SHROOM4Q9ULL8 CFHR2-201ENST00000367415 1059 ntAPPRIS P2 TSL 1 (best) BASIC7.81□□□□□ -1.16
SHROOM4Q9ULL8 BX248415.1-201ENST00000367421 1043 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
SHROOM4Q9ULL8 MIR218-2-201ENST00000385006 110 ntBASIC7.81□□□□□ -1.16
SHROOM4Q9ULL8 RN7SKP177-201ENST00000410567 355 ntBASIC7.81□□□□□ -1.16
SHROOM4Q9ULL8 AL590378.1-201ENST00000426818 303 ntTSL 3 BASIC7.81□□□□□ -1.16
SHROOM4Q9ULL8 HMGN2P31-201ENST00000432430 273 ntBASIC7.81□□□□□ -1.16
SHROOM4Q9ULL8 AL358972.1-201ENST00000434356 466 ntTSL 2 BASIC7.81□□□□□ -1.16
SHROOM4Q9ULL8 AC012442.1-201ENST00000436885 529 ntTSL 4 BASIC7.81□□□□□ -1.16
SHROOM4Q9ULL8 AP001432.1-201ENST00000440629 520 ntTSL 2 BASIC7.81□□□□□ -1.16
SHROOM4Q9ULL8 AC018731.1-201ENST00000447078 576 ntTSL 4 BASIC7.81□□□□□ -1.16
SHROOM4Q9ULL8 AL591363.1-201ENST00000450091 483 ntBASIC7.81□□□□□ -1.16
SHROOM4Q9ULL8 AL591473.1-201ENST00000464297 313 ntBASIC7.81□□□□□ -1.16
SHROOM4Q9ULL8 NUDT6-203ENST00000502270 678 ntTSL 5 BASIC7.81□□□□□ -1.16
SHROOM4Q9ULL8 LINC02466-202ENST00000509105 653 ntTSL 3 BASIC7.81□□□□□ -1.16
SHROOM4Q9ULL8 AC021192.1-201ENST00000510169 791 ntTSL 3 BASIC7.81□□□□□ -1.16
SHROOM4Q9ULL8 RNU6-352P-201ENST00000516908 107 ntBASIC7.81□□□□□ -1.16
SHROOM4Q9ULL8 AC007991.1-201ENST00000522680 631 ntBASIC7.81□□□□□ -1.16
SHROOM4Q9ULL8 AC009563.1-202ENST00000523365 643 ntTSL 3 BASIC7.81□□□□□ -1.16
SHROOM4Q9ULL8 LINC02394-201ENST00000549140 543 ntTSL 4 BASIC7.81□□□□□ -1.16
SHROOM4Q9ULL8 AC093510.2-201ENST00000562820 896 ntBASIC7.81□□□□□ -1.16
SHROOM4Q9ULL8 AC090912.2-203ENST00000581177 477 ntTSL 3 BASIC7.81□□□□□ -1.16
SHROOM4Q9ULL8 AC005255.1-201ENST00000593748 216 ntBASIC7.81□□□□□ -1.16
SHROOM4Q9ULL8 AC018618.2-201ENST00000604770 446 ntBASIC7.81□□□□□ -1.16
SHROOM4Q9ULL8 AC106730.3-201ENST00000624568 641 ntBASIC7.81□□□□□ -1.16
SHROOM4Q9ULL8 IFI16-203ENST00000359709 2609 ntAPPRIS ALT2 TSL 2 BASIC7.81□□□□□ -1.16
SHROOM4Q9ULL8 LINC00862-201ENST00000367355 1417 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
SHROOM4Q9ULL8 GPX8-203ENST00000503787 1411 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
SHROOM4Q9ULL8 INTU-201ENST00000335251 13233 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
SHROOM4Q9ULL8 MGAT4A-203ENST00000409391 2018 ntAPPRIS P1 TSL 5 BASIC7.8□□□□□ -1.16
SHROOM4Q9ULL8 GPR180-201ENST00000376958 8822 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
SHROOM4Q9ULL8 GABRA1-220ENST00000638159 4088 ntTSL 5 BASIC7.8□□□□□ -1.16
SHROOM4Q9ULL8 RNA5SP22-201ENST00000365393 109 ntBASIC7.8□□□□□ -1.16
SHROOM4Q9ULL8 AL357500.1-201ENST00000413004 279 ntTSL 3 BASIC7.8□□□□□ -1.16
SHROOM4Q9ULL8 AF178030.1-201ENST00000415088 402 ntTSL 2 BASIC7.8□□□□□ -1.16
SHROOM4Q9ULL8 AC009302.1-201ENST00000417147 390 ntBASIC7.8□□□□□ -1.16
SHROOM4Q9ULL8 GCG-202ENST00000418842 1289 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
SHROOM4Q9ULL8 LINC01967-202ENST00000437506 515 ntTSL 5 BASIC7.8□□□□□ -1.16
SHROOM4Q9ULL8 RPS4XP4-201ENST00000443195 763 ntBASIC7.8□□□□□ -1.16
SHROOM4Q9ULL8 AL031584.1-201ENST00000447169 754 ntBASIC7.8□□□□□ -1.16
SHROOM4Q9ULL8 HPRT1P2-201ENST00000505250 544 ntBASIC7.8□□□□□ -1.16
SHROOM4Q9ULL8 RNU1-95P-201ENST00000516357 160 ntBASIC7.8□□□□□ -1.16
SHROOM4Q9ULL8 RNU1-128P-201ENST00000516704 160 ntBASIC7.8□□□□□ -1.16
SHROOM4Q9ULL8 SOD1P3-201ENST00000518682 454 ntBASIC7.8□□□□□ -1.16
SHROOM4Q9ULL8 AC104350.1-201ENST00000518750 877 ntTSL 3 BASIC7.8□□□□□ -1.16
SHROOM4Q9ULL8 AC022511.1-201ENST00000544089 476 ntTSL 2 BASIC7.8□□□□□ -1.16
SHROOM4Q9ULL8 AC027807.1-201ENST00000559921 996 ntBASIC7.8□□□□□ -1.16
SHROOM4Q9ULL8 AC243829.5-201ENST00000578447 247 ntTSL 5 BASIC7.8□□□□□ -1.16
SHROOM4Q9ULL8 CCDC178-211ENST00000581852 876 ntAPPRIS ALT2 TSL 2 BASIC7.8□□□□□ -1.16
SHROOM4Q9ULL8 AL138721.1-201ENST00000616756 179 ntBASIC7.8□□□□□ -1.16
SHROOM4Q9ULL8 AL122125.1-201ENST00000616999 600 ntBASIC7.8□□□□□ -1.16
SHROOM4Q9ULL8 PACRG-211ENST00000621363 360 ntTSL 5 BASIC7.8□□□□□ -1.16
SHROOM4Q9ULL8 SNHG5-221ENST00000624295 632 ntTSL 5 BASIC7.8□□□□□ -1.16
SHROOM4Q9ULL8 EIF2AK2-201ENST00000233057 10042 ntAPPRIS P1 TSL 2 BASIC7.8□□□□□ -1.16
SHROOM4Q9ULL8 LGI1-210ENST00000629035 2251 ntTSL 5 BASIC7.79□□□□□ -1.16
SHROOM4Q9ULL8 STAU2-201ENST00000355780 4061 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
SHROOM4Q9ULL8 OR2AT4-205ENST00000641931 8357 ntAPPRIS P1 BASIC7.79□□□□□ -1.16
SHROOM4Q9ULL8 ENPP2-202ENST00000259486 3233 ntAPPRIS P3 TSL 1 (best) BASIC7.79□□□□□ -1.16
SHROOM4Q9ULL8 EXTL2-201ENST00000370113 2835 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
SHROOM4Q9ULL8 C5-201ENST00000223642 5465 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
SHROOM4Q9ULL8 S100A10-201ENST00000368809 616 ntAPPRIS P1 TSL 3 BASIC7.79□□□□□ -1.16
SHROOM4Q9ULL8 AC007066.1-201ENST00000392902 381 ntBASIC7.79□□□□□ -1.16
SHROOM4Q9ULL8 DEFB133-201ENST00000398721 186 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
SHROOM4Q9ULL8 NCSTNP1-201ENST00000406229 144 ntBASIC7.79□□□□□ -1.16
SHROOM4Q9ULL8 HSPE1P12-201ENST00000412576 301 ntBASIC7.79□□□□□ -1.16
SHROOM4Q9ULL8 MTCO3P4-201ENST00000419236 787 ntBASIC7.79□□□□□ -1.16
SHROOM4Q9ULL8 AC048351.1-201ENST00000420064 602 ntBASIC7.79□□□□□ -1.16
SHROOM4Q9ULL8 AL139002.1-201ENST00000435281 902 ntTSL 5 BASIC7.79□□□□□ -1.16
SHROOM4Q9ULL8 AL122008.1-201ENST00000456078 452 ntTSL 3 BASIC7.79□□□□□ -1.16
SHROOM4Q9ULL8 RPL23AP12-201ENST00000467573 473 ntBASIC7.79□□□□□ -1.16
SHROOM4Q9ULL8 GAPDHP36-201ENST00000480688 918 ntBASIC7.79□□□□□ -1.16
SHROOM4Q9ULL8 AC111193.1-201ENST00000504097 155 ntBASIC7.79□□□□□ -1.16
SHROOM4Q9ULL8 AC138938.1-201ENST00000515431 782 ntBASIC7.79□□□□□ -1.16
SHROOM4Q9ULL8 SNORA31.13-201ENST00000516624 135 ntBASIC7.79□□□□□ -1.16
SHROOM4Q9ULL8 AC005740.3-201ENST00000520882 344 ntTSL 2 BASIC7.79□□□□□ -1.16
SHROOM4Q9ULL8 CYCSP28-201ENST00000534284 321 ntBASIC7.79□□□□□ -1.16
SHROOM4Q9ULL8 MYRFL-202ENST00000535034 881 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
SHROOM4Q9ULL8 CR383656.14-201ENST00000551951 406 ntBASIC7.79□□□□□ -1.16
SHROOM4Q9ULL8 AC091563.1-202ENST00000574086 522 ntTSL 5 BASIC7.79□□□□□ -1.16
SHROOM4Q9ULL8 AC098483.2-201ENST00000603158 454 ntBASIC7.79□□□□□ -1.16
SHROOM4Q9ULL8 uc_338.9-201ENST00000617424 182 ntBASIC7.79□□□□□ -1.16
SHROOM4Q9ULL8 GOLPH3L-201ENST00000271732 2999 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
SHROOM4Q9ULL8 SPATA31D2P-201ENST00000429999 4388 ntBASIC7.79□□□□□ -1.16
SHROOM4Q9ULL8 SLCO1B7-201ENST00000421593 1923 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
SHROOM4Q9ULL8 CPXCR1-201ENST00000276127 1630 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
SHROOM4Q9ULL8 CNOT4-202ENST00000356162 2594 ntTSL 5 BASIC7.79□□□□□ -1.16
SHROOM4Q9ULL8 SCN11A-202ENST00000444237 5729 ntAPPRIS ALT2 TSL 5 BASIC7.79□□□□□ -1.16
SHROOM4Q9ULL8 AC093311.1-201ENST00000506586 2021 ntBASIC7.78□□□□□ -1.16
Retrieved 100 of 98,524 protein–RNA pairs in 76.9 ms