Protein–RNA interactions for Protein: Q9UJQ4

SALL4, Sal-like protein 4, humanhuman

Predictions only

Length 1,053 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SALL4Q9UJQ4 NSD3-206ENST00000527502 4471 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
SALL4Q9UJQ4 AC020743.2-201ENST00000639870 1370 ntTSL 5 BASIC6.32□□□□□ -1.4
SALL4Q9UJQ4 ZNF107-205ENST00000613690 5589 ntAPPRIS ALT2 TSL 5 BASIC6.32□□□□□ -1.4
SALL4Q9UJQ4 ZMYM2-210ENST00000610343 10200 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
SALL4Q9UJQ4 AL157938.3-201ENST00000502188 3084 ntTSL 4 BASIC6.32□□□□□ -1.4
SALL4Q9UJQ4 PIK3C2A-201ENST00000265970 8227 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
SALL4Q9UJQ4 HACD3-209ENST00000566511 1782 ntTSL 5 BASIC6.32□□□□□ -1.4
SALL4Q9UJQ4 ASB14-201ENST00000389601 3175 ntAPPRIS ALT2 TSL 5 BASIC6.32□□□□□ -1.4
SALL4Q9UJQ4 SLC38A9-203ENST00000416547 2236 ntTSL 5 BASIC6.32□□□□□ -1.4
SALL4Q9UJQ4 MT-ND3-201ENST00000361227 346 ntAPPRIS P1 BASIC6.32□□□□□ -1.4
SALL4Q9UJQ4 Y_RNA.157-201ENST00000363638 102 ntBASIC6.32□□□□□ -1.4
SALL4Q9UJQ4 Y_RNA.166-201ENST00000363730 102 ntBASIC6.32□□□□□ -1.4
SALL4Q9UJQ4 RNU6-657P-201ENST00000383904 107 ntBASIC6.32□□□□□ -1.4
SALL4Q9UJQ4 TRAJ25-201ENST00000390512 60 ntAPPRIS P1 BASIC6.32□□□□□ -1.4
SALL4Q9UJQ4 FGFR1OP2P1-201ENST00000395943 500 ntBASIC6.32□□□□□ -1.4
SALL4Q9UJQ4 Z97832.1-201ENST00000402490 328 ntBASIC6.32□□□□□ -1.4
SALL4Q9UJQ4 RPS20P2-201ENST00000402520 389 ntBASIC6.32□□□□□ -1.4
SALL4Q9UJQ4 RN7SKP17-201ENST00000411242 351 ntBASIC6.32□□□□□ -1.4
SALL4Q9UJQ4 RNU6-373P-201ENST00000411247 98 ntBASIC6.32□□□□□ -1.4
SALL4Q9UJQ4 RNU2-6P-201ENST00000411404 190 ntBASIC6.32□□□□□ -1.4
SALL4Q9UJQ4 OR9R1P-201ENST00000412200 877 ntBASIC6.32□□□□□ -1.4
SALL4Q9UJQ4 LINC01980-201ENST00000414382 543 ntTSL 4 BASIC6.32□□□□□ -1.4
SALL4Q9UJQ4 LINC01638-201ENST00000418271 552 ntTSL 3 BASIC6.32□□□□□ -1.4
SALL4Q9UJQ4 AC023347.1-202ENST00000419223 440 ntTSL 5 BASIC6.32□□□□□ -1.4
SALL4Q9UJQ4 PDCL2P1-201ENST00000419302 352 ntBASIC6.32□□□□□ -1.4
SALL4Q9UJQ4 AC104777.1-203ENST00000423428 554 ntTSL 3 BASIC6.32□□□□□ -1.4
SALL4Q9UJQ4 OR4F13P-201ENST00000428478 931 ntBASIC6.32□□□□□ -1.4
SALL4Q9UJQ4 AL049749.1-201ENST00000430281 632 ntTSL 2 BASIC6.32□□□□□ -1.4
SALL4Q9UJQ4 CBX1P4-201ENST00000439415 457 ntBASIC6.32□□□□□ -1.4
SALL4Q9UJQ4 AC073342.1-202ENST00000446192 457 ntTSL 5 BASIC6.32□□□□□ -1.4
SALL4Q9UJQ4 HMGN1P36-201ENST00000446623 298 ntBASIC6.32□□□□□ -1.4
SALL4Q9UJQ4 AC009963.3-201ENST00000458090 486 ntBASIC6.32□□□□□ -1.4
SALL4Q9UJQ4 NCOR1P1-201ENST00000478176 406 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
SALL4Q9UJQ4 AC139783.2-201ENST00000504847 1145 ntBASIC6.32□□□□□ -1.4
SALL4Q9UJQ4 LINC02379-201ENST00000505741 300 ntTSL 3 BASIC6.32□□□□□ -1.4
SALL4Q9UJQ4 AC109481.1-201ENST00000509173 282 ntBASIC6.32□□□□□ -1.4
SALL4Q9UJQ4 AC034159.1-201ENST00000513885 583 ntBASIC6.32□□□□□ -1.4
SALL4Q9UJQ4 RNU6-1045P-201ENST00000516321 107 ntBASIC6.32□□□□□ -1.4
SALL4Q9UJQ4 AP003181.2-201ENST00000528941 181 ntBASIC6.32□□□□□ -1.4
SALL4Q9UJQ4 AC002056.2-201ENST00000532913 284 ntTSL 5 BASIC6.32□□□□□ -1.4
SALL4Q9UJQ4 HPRT1P3-201ENST00000539521 576 ntBASIC6.32□□□□□ -1.4
SALL4Q9UJQ4 AC011611.1-201ENST00000552179 197 ntBASIC6.32□□□□□ -1.4
SALL4Q9UJQ4 SMARCE1P3-201ENST00000553649 1231 ntBASIC6.32□□□□□ -1.4
SALL4Q9UJQ4 AC022523.1-201ENST00000560360 364 ntTSL 5 BASIC6.32□□□□□ -1.4
SALL4Q9UJQ4 AC090515.3-201ENST00000560431 315 ntBASIC6.32□□□□□ -1.4
SALL4Q9UJQ4 AC020978.4-201ENST00000569088 460 ntTSL 3 BASIC6.32□□□□□ -1.4
SALL4Q9UJQ4 AJ003147.1-201ENST00000576762 454 ntTSL 3 BASIC6.32□□□□□ -1.4
SALL4Q9UJQ4 CBLN2-208ENST00000584764 543 ntTSL 4 BASIC6.32□□□□□ -1.4
SALL4Q9UJQ4 AC100863.1-201ENST00000584843 560 ntTSL 4 BASIC6.32□□□□□ -1.4
SALL4Q9UJQ4 BNIP3P22-201ENST00000593399 556 ntBASIC6.32□□□□□ -1.4
SALL4Q9UJQ4 AC243960.4-201ENST00000600532 288 ntBASIC6.32□□□□□ -1.4
SALL4Q9UJQ4 AC097467.3-207ENST00000602249 725 ntTSL 5 BASIC6.32□□□□□ -1.4
SALL4Q9UJQ4 AC007687.1-201ENST00000602704 304 ntBASIC6.32□□□□□ -1.4
SALL4Q9UJQ4 AL356515.1-201ENST00000611081 415 ntTSL 3 BASIC6.32□□□□□ -1.4
SALL4Q9UJQ4 RMST_3.1-201ENST00000611651 109 ntBASIC6.32□□□□□ -1.4
SALL4Q9UJQ4 MMP13-203ENST00000615555 1152 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
SALL4Q9UJQ4 AC007557.3-201ENST00000418591 3135 ntTSL 2 BASIC6.32□□□□□ -1.4
SALL4Q9UJQ4 PNISR-202ENST00000438806 3142 ntAPPRIS P1 TSL 2 BASIC6.32□□□□□ -1.4
SALL4Q9UJQ4 CDC42SE2-201ENST00000360515 3591 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
SALL4Q9UJQ4 PIH1D3-203ENST00000535523 1926 ntAPPRIS P1 TSL 5 BASIC6.32□□□□□ -1.4
SALL4Q9UJQ4 FRYL-202ENST00000358350 11706 ntAPPRIS P1 TSL 5 BASIC6.32□□□□□ -1.4
SALL4Q9UJQ4 GYPE-201ENST00000358615 1684 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
SALL4Q9UJQ4 POGZ-213ENST00000491586 4130 ntTSL 5 BASIC6.32□□□□□ -1.4
SALL4Q9UJQ4 GPX8-203ENST00000503787 1411 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
SALL4Q9UJQ4 NOL8-214ENST00000535387 3390 ntAPPRIS ALT2 TSL 5 BASIC6.32□□□□□ -1.4
SALL4Q9UJQ4 GNS-202ENST00000418919 4877 ntAPPRIS ALT2 TSL 1 (best) BASIC6.32□□□□□ -1.4
SALL4Q9UJQ4 TOR1AIP2-206ENST00000609928 4364 ntAPPRIS P1 TSL 2 BASIC6.32□□□□□ -1.4
SALL4Q9UJQ4 CHN1-201ENST00000295497 2047 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
SALL4Q9UJQ4 PDE1A-202ENST00000358139 2015 ntAPPRIS ALT2 TSL 2 BASIC6.32□□□□□ -1.4
SALL4Q9UJQ4 CHD2-208ENST00000626874 7764 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
SALL4Q9UJQ4 ASAH2-202ENST00000395526 6880 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
SALL4Q9UJQ4 SLC30A7-203ENST00000370112 7898 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
SALL4Q9UJQ4 PRRC1-201ENST00000296666 4699 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
SALL4Q9UJQ4 ELMO1-207ENST00000442504 3154 ntAPPRIS P1 TSL 2 BASIC6.31□□□□□ -1.4
SALL4Q9UJQ4 RBPJ-202ENST00000342320 5761 ntAPPRIS P3 TSL 1 (best) BASIC6.31□□□□□ -1.4
SALL4Q9UJQ4 NDRG3-202ENST00000359675 2917 ntAPPRIS ALT1 TSL 1 (best) BASIC6.31□□□□□ -1.4
SALL4Q9UJQ4 WDR35-201ENST00000281405 6918 ntAPPRIS P3 TSL 1 (best) BASIC6.31□□□□□ -1.4
SALL4Q9UJQ4 PATJ-203ENST00000371158 8505 ntAPPRIS P1 TSL 5 BASIC6.31□□□□□ -1.4
SALL4Q9UJQ4 LMO3-225ENST00000541295 3498 ntTSL 2 BASIC6.31□□□□□ -1.4
SALL4Q9UJQ4 RABGAP1L-218ENST00000489615 6821 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
SALL4Q9UJQ4 C16orf87-202ENST00000394806 6640 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
SALL4Q9UJQ4 Y_RNA.58-201ENST00000362807 102 ntBASIC6.31□□□□□ -1.4
SALL4Q9UJQ4 RNU6-451P-201ENST00000362921 107 ntBASIC6.31□□□□□ -1.4
SALL4Q9UJQ4 Y_RNA.154-201ENST00000363624 102 ntBASIC6.31□□□□□ -1.4
SALL4Q9UJQ4 RNY3P1-201ENST00000365085 102 ntBASIC6.31□□□□□ -1.4
SALL4Q9UJQ4 RNY3-201ENST00000365484 102 ntBASIC6.31□□□□□ -1.4
SALL4Q9UJQ4 RNA5SP211-201ENST00000365516 117 ntBASIC6.31□□□□□ -1.4
SALL4Q9UJQ4 RNU6-729P-201ENST00000384399 107 ntBASIC6.31□□□□□ -1.4
SALL4Q9UJQ4 Y_RNA.490-201ENST00000384413 102 ntBASIC6.31□□□□□ -1.4
SALL4Q9UJQ4 MIR323B-201ENST00000385269 82 ntBASIC6.31□□□□□ -1.4
SALL4Q9UJQ4 AC234781.4-201ENST00000419384 244 ntBASIC6.31□□□□□ -1.4
SALL4Q9UJQ4 NMD3P2-201ENST00000421815 761 ntBASIC6.31□□□□□ -1.4
SALL4Q9UJQ4 MTND2P23-201ENST00000422990 651 ntBASIC6.31□□□□□ -1.4
SALL4Q9UJQ4 AL157884.2-201ENST00000424177 551 ntTSL 3 BASIC6.31□□□□□ -1.4
SALL4Q9UJQ4 AC024619.1-202ENST00000426489 495 ntTSL 3 BASIC6.31□□□□□ -1.4
SALL4Q9UJQ4 TSSK4-203ENST00000428351 576 ntTSL 2 BASIC6.31□□□□□ -1.4
SALL4Q9UJQ4 AP000695.2-201ENST00000428667 715 ntTSL 5 BASIC6.31□□□□□ -1.4
SALL4Q9UJQ4 OR51AB1P-201ENST00000429046 620 ntBASIC6.31□□□□□ -1.4
SALL4Q9UJQ4 AC110602.1-201ENST00000437414 318 ntBASIC6.31□□□□□ -1.4
SALL4Q9UJQ4 AC016027.4-201ENST00000450866 277 ntBASIC6.31□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 125.6 ms