Protein–RNA interactions for Protein: Q9P219

CCDC88C, Protein Daple, humanhuman

Predictions only

Length 2,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC88CQ9P219 AC092747.2-201ENST00000545069 983 ntBASIC3.56□□□□□ -1.84
CCDC88CQ9P219 AC107016.1-201ENST00000550463 337 ntBASIC3.56□□□□□ -1.84
CCDC88CQ9P219 LINC01232-201ENST00000625254 836 ntTSL 5 BASIC3.56□□□□□ -1.84
CCDC88CQ9P219 RNF17-201ENST00000255324 5119 ntAPPRIS P1 TSL 2 BASIC3.56□□□□□ -1.84
CCDC88CQ9P219 AC093535.2-201ENST00000624769 2326 ntBASIC3.56□□□□□ -1.84
CCDC88CQ9P219 POSTN-203ENST00000379747 3373 ntAPPRIS P3 TSL 1 (best) BASIC3.56□□□□□ -1.84
CCDC88CQ9P219 BIRC3-201ENST00000263464 5197 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
CCDC88CQ9P219 UGT2B7-201ENST00000305231 1887 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
CCDC88CQ9P219 OR9K2-202ENST00000641329 3120 ntAPPRIS P1 BASIC3.55□□□□□ -1.84
CCDC88CQ9P219 G2E3-201ENST00000206595 5804 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
CCDC88CQ9P219 AL512430.2-201ENST00000406786 339 ntBASIC3.55□□□□□ -1.84
CCDC88CQ9P219 CBX1P3-201ENST00000413296 527 ntBASIC3.55□□□□□ -1.84
CCDC88CQ9P219 TCEA1P2-201ENST00000420496 906 ntBASIC3.55□□□□□ -1.84
CCDC88CQ9P219 AP003025.1-201ENST00000421650 149 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
CCDC88CQ9P219 F10-AS1-201ENST00000424635 417 ntTSL 5 BASIC3.55□□□□□ -1.84
CCDC88CQ9P219 AC093581.1-202ENST00000430890 391 ntTSL 2 BASIC3.55□□□□□ -1.84
CCDC88CQ9P219 AL512658.1-202ENST00000433486 400 ntTSL 3 BASIC3.55□□□□□ -1.84
CCDC88CQ9P219 AC009263.1-201ENST00000441193 1239 ntBASIC3.55□□□□□ -1.84
CCDC88CQ9P219 LINC00393-202ENST00000452852 485 ntTSL 3 BASIC3.55□□□□□ -1.84
CCDC88CQ9P219 AC107015.1-201ENST00000466902 747 ntBASIC3.55□□□□□ -1.84
CCDC88CQ9P219 HSPD1P15-201ENST00000505573 1122 ntBASIC3.55□□□□□ -1.84
CCDC88CQ9P219 OPRM1-223ENST00000524163 1251 ntAPPRIS ALT1 TSL 1 (best) BASIC3.55□□□□□ -1.84
CCDC88CQ9P219 LINC01491-202ENST00000558792 439 ntTSL 3 BASIC3.55□□□□□ -1.84
CCDC88CQ9P219 AC020914.6-201ENST00000594327 272 ntBASIC3.55□□□□□ -1.84
CCDC88CQ9P219 AC096577.2-201ENST00000611455 153 ntBASIC3.55□□□□□ -1.84
CCDC88CQ9P219 AC243654.2-201ENST00000612843 443 ntBASIC3.55□□□□□ -1.84
CCDC88CQ9P219 AC097478.4-201ENST00000615968 522 ntTSL 5 BASIC3.55□□□□□ -1.84
CCDC88CQ9P219 AC022149.2-201ENST00000621061 203 ntBASIC3.55□□□□□ -1.84
CCDC88CQ9P219 AC091905.1-201ENST00000624400 311 ntBASIC3.55□□□□□ -1.84
CCDC88CQ9P219 APC-207ENST00000508376 10619 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
CCDC88CQ9P219 PARP8-211ENST00000505554 3825 ntTSL 5 BASIC3.55□□□□□ -1.84
CCDC88CQ9P219 PTAR1-202ENST00000377200 9876 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
CCDC88CQ9P219 RGPD3-202ENST00000409886 5594 ntAPPRIS P2 TSL 1 (best) BASIC3.55□□□□□ -1.84
CCDC88CQ9P219 RHOT1-204ENST00000394692 2960 ntTSL 2 BASIC3.55□□□□□ -1.84
CCDC88CQ9P219 OR5V1-215ENST00000377154 1266 ntAPPRIS P1 BASIC3.54□□□□□ -1.84
CCDC88CQ9P219 RN7SKP159-201ENST00000410657 292 ntBASIC3.54□□□□□ -1.84
CCDC88CQ9P219 RPL7AP73-201ENST00000413490 353 ntBASIC3.54□□□□□ -1.84
CCDC88CQ9P219 TCEA1P4-201ENST00000415066 844 ntBASIC3.54□□□□□ -1.84
CCDC88CQ9P219 RPL21P109-201ENST00000422213 475 ntBASIC3.54□□□□□ -1.84
CCDC88CQ9P219 AC060834.2-201ENST00000447999 618 ntTSL 3 BASIC3.54□□□□□ -1.84
CCDC88CQ9P219 MTND2P25-201ENST00000449028 610 ntBASIC3.54□□□□□ -1.84
CCDC88CQ9P219 snoU13.22-201ENST00000459428 104 ntBASIC3.54□□□□□ -1.84
CCDC88CQ9P219 CREM-226ENST00000469949 721 ntTSL 3 BASIC3.54□□□□□ -1.84
CCDC88CQ9P219 AC069499.1-201ENST00000489433 509 ntBASIC3.54□□□□□ -1.84
CCDC88CQ9P219 OR9N1P-201ENST00000491296 333 ntBASIC3.54□□□□□ -1.84
CCDC88CQ9P219 AC092994.1-201ENST00000498604 279 ntTSL 3 BASIC3.54□□□□□ -1.84
CCDC88CQ9P219 AC093853.1-201ENST00000515689 483 ntBASIC3.54□□□□□ -1.84
CCDC88CQ9P219 AC007193.1-201ENST00000599645 448 ntTSL 5 BASIC3.54□□□□□ -1.84
CCDC88CQ9P219 AC096553.1-201ENST00000605169 829 ntBASIC3.54□□□□□ -1.84
CCDC88CQ9P219 TIMM9-202ENST00000395159 1336 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
CCDC88CQ9P219 SGO1-AS1-203ENST00000455626 2041 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
CCDC88CQ9P219 MACC1-201ENST00000332878 2994 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
CCDC88CQ9P219 SKIL-201ENST00000259119 3057 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
CCDC88CQ9P219 ZNF266-204ENST00000590306 3317 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
CCDC88CQ9P219 CCDC121-201ENST00000324364 2342 ntAPPRIS P3 TSL 1 (best) BASIC3.54□□□□□ -1.84
CCDC88CQ9P219 ESD-201ENST00000378697 1079 ntTSL 5 BASIC3.54□□□□□ -1.84
CCDC88CQ9P219 RAC1P3-201ENST00000416129 580 ntBASIC3.54□□□□□ -1.84
CCDC88CQ9P219 AL159987.2-201ENST00000432754 307 ntBASIC3.54□□□□□ -1.84
CCDC88CQ9P219 AC135371.1-201ENST00000446964 453 ntTSL 2 BASIC3.54□□□□□ -1.84
CCDC88CQ9P219 AC098820.1-201ENST00000453157 512 ntTSL 2 BASIC3.54□□□□□ -1.84
CCDC88CQ9P219 LINC01510-203ENST00000458082 626 ntTSL 3 BASIC3.54□□□□□ -1.84
CCDC88CQ9P219 AC104619.4-201ENST00000510773 249 ntBASIC3.54□□□□□ -1.84
CCDC88CQ9P219 AC099805.1-203ENST00000518177 773 ntTSL 2 BASIC3.54□□□□□ -1.84
CCDC88CQ9P219 OR7E13P-201ENST00000526052 910 ntBASIC3.54□□□□□ -1.84
CCDC88CQ9P219 ALKBH3-AS1-202ENST00000527960 547 ntTSL 4 BASIC3.54□□□□□ -1.84
CCDC88CQ9P219 PAFAH1B2-206ENST00000530272 850 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
CCDC88CQ9P219 AC141257.3-201ENST00000572906 215 ntBASIC3.54□□□□□ -1.84
CCDC88CQ9P219 AL451086.1-201ENST00000605596 223 ntBASIC3.54□□□□□ -1.84
CCDC88CQ9P219 SNORA51-201ENST00000606420 132 ntBASIC3.54□□□□□ -1.84
CCDC88CQ9P219 MIR8058-201ENST00000615737 89 ntBASIC3.54□□□□□ -1.84
CCDC88CQ9P219 AC027287.1-201ENST00000553115 1453 ntBASIC3.54□□□□□ -1.84
CCDC88CQ9P219 GTDC1-206ENST00000409214 2954 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
CCDC88CQ9P219 FUT9-201ENST00000302103 12783 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
CCDC88CQ9P219 SPINK1-201ENST00000296695 542 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
CCDC88CQ9P219 OR6C3-201ENST00000379667 936 ntAPPRIS P1 BASIC3.53□□□□□ -1.84
CCDC88CQ9P219 SNORD3H-201ENST00000384486 214 ntBASIC3.53□□□□□ -1.84
CCDC88CQ9P219 TRAV39-201ENST00000390466 331 ntAPPRIS P1 BASIC3.53□□□□□ -1.84
CCDC88CQ9P219 AL035604.1-201ENST00000416481 531 ntTSL 3 BASIC3.53□□□□□ -1.84
CCDC88CQ9P219 AL390879.2-203ENST00000426943 1121 ntBASIC3.53□□□□□ -1.84
CCDC88CQ9P219 AC127537.2-201ENST00000439258 465 ntBASIC3.53□□□□□ -1.84
CCDC88CQ9P219 NAMPTP1-201ENST00000440465 2514 ntBASIC3.53□□□□□ -1.84
CCDC88CQ9P219 AC104978.1-201ENST00000449387 391 ntBASIC3.53□□□□□ -1.84
CCDC88CQ9P219 CNOT10-206ENST00000454516 2760 ntTSL 2 BASIC3.53□□□□□ -1.84
CCDC88CQ9P219 AC010307.1-201ENST00000467206 836 ntBASIC3.53□□□□□ -1.84
CCDC88CQ9P219 AC011405.1-202ENST00000504658 803 ntTSL 3 BASIC3.53□□□□□ -1.84
CCDC88CQ9P219 HMGN1P15-201ENST00000513870 295 ntBASIC3.53□□□□□ -1.84
CCDC88CQ9P219 RNU4ATAC6P-201ENST00000516592 126 ntBASIC3.53□□□□□ -1.84
CCDC88CQ9P219 NARSP2-201ENST00000518524 679 ntBASIC3.53□□□□□ -1.84
CCDC88CQ9P219 C14orf2-211ENST00000557040 472 ntAPPRIS P1 TSL 3 BASIC3.53□□□□□ -1.84
CCDC88CQ9P219 AC010528.1-201ENST00000568714 739 ntTSL 4 BASIC3.53□□□□□ -1.84
CCDC88CQ9P219 AC022601.1-201ENST00000596954 577 ntTSL 4 BASIC3.53□□□□□ -1.84
CCDC88CQ9P219 AC093909.5-201ENST00000621839 1799 ntBASIC3.53□□□□□ -1.84
CCDC88CQ9P219 PCBP1-AS1-348ENST00000629506 667 ntTSL 5 BASIC3.53□□□□□ -1.84
CCDC88CQ9P219 AKAP6-201ENST00000280979 15006 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
CCDC88CQ9P219 ALS2CR12-201ENST00000286190 1769 ntAPPRIS P3 TSL 1 (best) BASIC3.53□□□□□ -1.84
CCDC88CQ9P219 MEI4-201ENST00000602452 4800 ntAPPRIS P1 TSL 5 BASIC3.53□□□□□ -1.84
CCDC88CQ9P219 AL161912.2-201ENST00000565707 3007 ntBASIC3.53□□□□□ -1.84
CCDC88CQ9P219 AP004289.2-201ENST00000444413 1457 ntBASIC3.53□□□□□ -1.84
CCDC88CQ9P219 RNA5SP502-201ENST00000362694 119 ntBASIC3.53□□□□□ -1.84
CCDC88CQ9P219 RNA5SP42-201ENST00000364278 115 ntBASIC3.53□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 91.5 ms